EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000021814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 429 bases
Position: chrNTIC01033278.1:17011535-17011963
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000040515	RNA_pol_Rpb4	PF03874.16	7.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000042799	-	429	-	ENSCJAP00000040515	142 (aa)	-	F7HQK1

Gene Model

Click here to download ENSCJAG00000021814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000021814	-	100	99.296	ENSCJAG00000042216	-	100	99.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000021814	-	100	99.296	ENSG00000144231	POLR2D	100	99.296	Homo_sapiens
ENSCJAG00000021814	-	99	89.362	ENSAPOG00000023553	polr2d	98	89.362	Acanthochromis_polyacanthus
ENSCJAG00000021814	-	100	97.917	ENSAMEG00000011746	POLR2D	100	97.917	Ailuropoda_melanoleuca
ENSCJAG00000021814	-	99	89.362	ENSAOCG00000007295	polr2d	98	89.362	Amphiprion_ocellaris
ENSCJAG00000021814	-	99	89.362	ENSAPEG00000018714	polr2d	98	89.362	Amphiprion_percula
ENSCJAG00000021814	-	100	90.278	ENSATEG00000020416	polr2d	100	90.278	Anabas_testudineus
ENSCJAG00000021814	-	100	95.775	ENSACAG00000005255	POLR2D	100	95.775	Anolis_carolinensis
ENSCJAG00000021814	-	100	99.296	ENSANAG00000019959	POLR2D	100	99.296	Aotus_nancymaae
ENSCJAG00000021814	-	100	89.583	ENSACLG00000009919	polr2d	100	69.444	Astatotilapia_calliptera
ENSCJAG00000021814	-	94	93.985	ENSAMXG00000008954	polr2d	100	89.510	Astyanax_mexicanus
ENSCJAG00000021814	-	100	98.592	ENSBTAG00000053244	POLR2D	100	98.592	Bos_taurus
ENSCJAG00000021814	-	99	57.639	WBGene00018391	rpb-4	100	57.639	Caenorhabditis_elegans
ENSCJAG00000021814	-	100	99.296	ENSCAFG00000004311	POLR2D	100	99.296	Canis_familiaris
ENSCJAG00000021814	-	100	99.296	ENSCAFG00020003617	POLR2D	100	99.296	Canis_lupus_dingo
ENSCJAG00000021814	-	100	97.887	ENSCHIG00000025995	POLR2D	100	97.887	Capra_hircus
ENSCJAG00000021814	-	82	98.291	ENSTSYG00000036021	POLR2D	100	98.291	Carlito_syrichta
ENSCJAG00000021814	-	100	97.887	ENSCPOG00000002571	POLR2D	100	97.887	Cavia_porcellus
ENSCJAG00000021814	-	100	99.296	ENSCCAG00000037709	POLR2D	100	99.296	Cebus_capucinus
ENSCJAG00000021814	-	100	98.592	ENSCATG00000036749	POLR2D	100	98.592	Cercocebus_atys
ENSCJAG00000021814	-	100	98.592	ENSCLAG00000004449	POLR2D	100	98.592	Chinchilla_lanigera
ENSCJAG00000021814	-	100	98.592	ENSCSAG00000016861	POLR2D	100	98.592	Chlorocebus_sabaeus
ENSCJAG00000021814	-	82	99.145	ENSCHOG00000013850	POLR2D	100	99.145	Choloepus_hoffmanni
ENSCJAG00000021814	-	100	95.070	ENSCPBG00000019132	POLR2D	51	95.070	Chrysemys_picta_bellii
ENSCJAG00000021814	-	90	85.938	ENSCING00000011474	-	96	85.938	Ciona_intestinalis
ENSCJAG00000021814	-	90	85.938	ENSCSAVG00000008353	-	88	85.938	Ciona_savignyi
ENSCJAG00000021814	-	100	99.296	ENSCANG00000043665	POLR2D	100	99.296	Colobus_angolensis_palliatus
ENSCJAG00000021814	-	100	99.296	ENSCGRG00001013608	Polr2d	100	99.296	Cricetulus_griseus_chok1gshd
ENSCJAG00000021814	-	82	99.145	ENSCGRG00000012624	Polr2d	100	99.145	Cricetulus_griseus_crigri
ENSCJAG00000021814	-	100	89.583	ENSCSEG00000006147	polr2d	100	89.583	Cynoglossus_semilaevis
ENSCJAG00000021814	-	100	90.278	ENSCVAG00000000779	polr2d	100	90.278	Cyprinodon_variegatus
ENSCJAG00000021814	-	100	91.549	ENSDARG00000076509	polr2d	100	91.549	Danio_rerio
ENSCJAG00000021814	-	100	97.183	ENSDNOG00000008527	POLR2D	100	97.183	Dasypus_novemcinctus
ENSCJAG00000021814	-	100	98.592	ENSDORG00000026897	Polr2d	100	98.592	Dipodomys_ordii
ENSCJAG00000021814	-	92	76.923	FBgn0263757	Rpb4	94	76.923	Drosophila_melanogaster
ENSCJAG00000021814	-	100	91.549	ENSEBUG00000007675	polr2d	100	91.549	Eptatretus_burgeri
ENSCJAG00000021814	-	100	98.592	ENSEASG00005007103	POLR2D	100	98.592	Equus_asinus_asinus
ENSCJAG00000021814	-	100	99.296	ENSECAG00000000556	POLR2D	100	99.296	Equus_caballus
ENSCJAG00000021814	-	99	90.780	ENSELUG00000005928	polr2d	99	90.780	Esox_lucius
ENSCJAG00000021814	-	100	99.296	ENSFCAG00000027816	POLR2D	100	99.296	Felis_catus
ENSCJAG00000021814	-	100	97.183	ENSFALG00000003528	POLR2D	100	97.183	Ficedula_albicollis
ENSCJAG00000021814	-	100	97.887	ENSFDAG00000007217	POLR2D	100	97.887	Fukomys_damarensis
ENSCJAG00000021814	-	100	93.007	ENSGMOG00000001823	polr2d	99	93.007	Gadus_morhua
ENSCJAG00000021814	-	100	96.479	ENSGALG00000002057	POLR2D	100	96.479	Gallus_gallus
ENSCJAG00000021814	-	100	90.972	ENSGAFG00000016932	polr2d	71	90.972	Gambusia_affinis
ENSCJAG00000021814	-	100	89.583	ENSGACG00000004639	polr2d	100	89.583	Gasterosteus_aculeatus
ENSCJAG00000021814	-	100	95.070	ENSGAGG00000021308	POLR2D	100	95.070	Gopherus_agassizii
ENSCJAG00000021814	-	100	99.296	ENSGGOG00000004723	POLR2D	100	99.296	Gorilla_gorilla
ENSCJAG00000021814	-	100	98.592	ENSHGLG00000016570	Polr2d	100	98.592	Heterocephalus_glaber_female
ENSCJAG00000021814	-	100	98.592	ENSHGLG00100013785	Polr2d	100	98.592	Heterocephalus_glaber_male
ENSCJAG00000021814	-	100	88.028	ENSHCOG00000006425	polr2d	100	88.028	Hippocampus_comes
ENSCJAG00000021814	-	100	90.845	ENSIPUG00000011192	polr2d	100	90.845	Ictalurus_punctatus
ENSCJAG00000021814	-	100	97.183	ENSSTOG00000023329	POLR2D	100	97.183	Ictidomys_tridecemlineatus
ENSCJAG00000021814	-	100	97.887	ENSJJAG00000015053	-	100	97.887	Jaculus_jaculus
ENSCJAG00000021814	-	82	93.162	ENSJJAG00000005723	-	94	93.162	Jaculus_jaculus
ENSCJAG00000021814	-	100	88.732	ENSJJAG00000000783	-	100	88.732	Jaculus_jaculus
ENSCJAG00000021814	-	85	90.083	ENSKMAG00000010677	polr2d	68	90.083	Kryptolebias_marmoratus
ENSCJAG00000021814	-	100	95.775	ENSLACG00000017253	POLR2D	100	95.775	Latimeria_chalumnae
ENSCJAG00000021814	-	100	90.972	ENSLOCG00000009106	polr2d	100	90.972	Lepisosteus_oculatus
ENSCJAG00000021814	-	100	98.592	ENSLAFG00000001848	POLR2D	100	98.592	Loxodonta_africana
ENSCJAG00000021814	-	100	98.592	ENSMFAG00000031937	POLR2D	100	98.592	Macaca_fascicularis
ENSCJAG00000021814	-	100	98.592	ENSMMUG00000001989	POLR2D	100	98.592	Macaca_mulatta
ENSCJAG00000021814	-	100	98.592	ENSMNEG00000035505	POLR2D	100	98.592	Macaca_nemestrina
ENSCJAG00000021814	-	100	98.592	ENSMLEG00000035827	POLR2D	100	98.592	Mandrillus_leucophaeus
ENSCJAG00000021814	-	100	96.479	ENSMGAG00000001248	POLR2D	100	96.479	Meleagris_gallopavo
ENSCJAG00000021814	-	100	98.592	ENSMAUG00000014518	Polr2d	100	98.592	Mesocricetus_auratus
ENSCJAG00000021814	-	100	98.592	ENSMICG00000009931	POLR2D	100	98.592	Microcebus_murinus
ENSCJAG00000021814	-	100	96.479	ENSMOCG00000019367	Polr2d	100	96.479	Microtus_ochrogaster
ENSCJAG00000021814	-	100	80.282	ENSMODG00000025033	-	100	80.282	Monodelphis_domestica
ENSCJAG00000021814	-	100	97.887	ENSMODG00000018653	-	100	97.887	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.986	ENSMODG00000025030	-	100	80.986	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.282	ENSMODG00000025031	-	100	80.282	Monodelphis_domestica
ENSCJAG00000021814	-	100	79.577	ENSMODG00000025032	-	100	79.577	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.282	ENSMODG00000025034	-	100	80.282	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.282	ENSMODG00000025035	-	100	80.282	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.282	ENSMODG00000025036	-	100	80.282	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.282	ENSMODG00000025029	-	100	80.282	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.986	ENSMODG00000025027	-	100	80.986	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.986	ENSMODG00000025026	-	100	80.986	Monodelphis_domestica
ENSCJAG00000021814	-	100	80.986	ENSMODG00000025028	-	100	80.986	Monodelphis_domestica
ENSCJAG00000021814	-	100	90.278	ENSMALG00000018266	polr2d	100	90.278	Monopterus_albus
ENSCJAG00000021814	-	100	99.296	MGP_CAROLIEiJ_G0022066	Polr2d	100	99.296	Mus_caroli
ENSCJAG00000021814	-	100	99.296	ENSMUSG00000024258	Polr2d	100	99.296	Mus_musculus
ENSCJAG00000021814	-	100	99.296	MGP_PahariEiJ_G0018800	Polr2d	100	99.296	Mus_pahari
ENSCJAG00000021814	-	100	99.296	MGP_SPRETEiJ_G0022977	Polr2d	100	99.296	Mus_spretus
ENSCJAG00000021814	-	100	99.296	ENSMPUG00000016685	POLR2D	100	99.296	Mustela_putorius_furo
ENSCJAG00000021814	-	83	99.153	ENSMLUG00000006862	POLR2D	100	99.153	Myotis_lucifugus
ENSCJAG00000021814	-	100	99.296	ENSNGAG00000014862	Polr2d	100	99.296	Nannospalax_galili
ENSCJAG00000021814	-	100	99.296	ENSNLEG00000027191	POLR2D	100	99.296	Nomascus_leucogenys
ENSCJAG00000021814	-	82	98.291	ENSOPRG00000005327	POLR2D	100	98.291	Ochotona_princeps
ENSCJAG00000021814	-	100	98.592	ENSODEG00000005262	POLR2D	100	98.592	Octodon_degus
ENSCJAG00000021814	-	100	90.278	ENSONIG00000017290	polr2d	100	90.278	Oreochromis_niloticus
ENSCJAG00000021814	-	83	98.305	ENSOANG00000013216	POLR2D	100	98.305	Ornithorhynchus_anatinus
ENSCJAG00000021814	-	100	96.479	ENSOCUG00000023403	-	100	96.479	Oryctolagus_cuniculus
ENSCJAG00000021814	-	100	91.608	ENSOCUG00000021449	-	100	91.608	Oryctolagus_cuniculus
ENSCJAG00000021814	-	100	87.500	ENSORLG00000005266	polr2d	100	87.500	Oryzias_latipes
ENSCJAG00000021814	-	100	87.500	ENSORLG00020006647	polr2d	100	87.500	Oryzias_latipes_hni
ENSCJAG00000021814	-	100	87.500	ENSORLG00015003222	polr2d	100	87.500	Oryzias_latipes_hsok
ENSCJAG00000021814	-	100	88.194	ENSOMEG00000018915	polr2d	100	88.194	Oryzias_melastigma
ENSCJAG00000021814	-	100	97.222	ENSOGAG00000017118	POLR2D	100	97.222	Otolemur_garnettii
ENSCJAG00000021814	-	100	97.887	ENSOARG00000015995	POLR2D	100	97.887	Ovis_aries
ENSCJAG00000021814	-	100	99.296	ENSPPRG00000020222	POLR2D	100	99.296	Panthera_pardus
ENSCJAG00000021814	-	100	99.296	ENSPTIG00000018618	POLR2D	100	99.296	Panthera_tigris_altaica
ENSCJAG00000021814	-	100	99.296	ENSPTRG00000012436	POLR2D	100	99.296	Pan_troglodytes
ENSCJAG00000021814	-	100	98.592	ENSPANG00000018602	POLR2D	100	98.592	Papio_anubis
ENSCJAG00000021814	-	99	92.254	ENSPKIG00000012166	polr2d	99	92.254	Paramormyrops_kingsleyae
ENSCJAG00000021814	-	83	98.305	ENSPSIG00000002873	POLR2D	100	98.305	Pelodiscus_sinensis
ENSCJAG00000021814	-	100	99.296	ENSPEMG00000018244	Polr2d	100	99.296	Peromyscus_maniculatus_bairdii
ENSCJAG00000021814	-	100	87.324	ENSPMAG00000005021	polr2d	99	87.324	Petromyzon_marinus
ENSCJAG00000021814	-	100	90.972	ENSPFOG00000008969	polr2d	100	90.972	Poecilia_formosa
ENSCJAG00000021814	-	100	90.972	ENSPLAG00000017210	polr2d	100	90.972	Poecilia_latipinna
ENSCJAG00000021814	-	100	90.972	ENSPMEG00000005160	polr2d	100	90.972	Poecilia_mexicana
ENSCJAG00000021814	-	73	94.231	ENSPREG00000021862	polr2d	100	94.231	Poecilia_reticulata
ENSCJAG00000021814	-	100	99.296	ENSPPYG00000012759	POLR2D	100	99.296	Pongo_abelii
ENSCJAG00000021814	-	100	98.592	ENSPCAG00000001396	POLR2D	100	98.592	Procavia_capensis
ENSCJAG00000021814	-	100	98.592	ENSPCOG00000022076	POLR2D	100	98.592	Propithecus_coquereli
ENSCJAG00000021814	-	100	98.592	ENSPVAG00000004002	POLR2D	100	98.592	Pteropus_vampyrus
ENSCJAG00000021814	-	100	90.909	ENSPNAG00000018246	polr2d	100	90.909	Pygocentrus_nattereri
ENSCJAG00000021814	-	100	99.296	ENSRNOG00000016231	Polr2d	100	99.296	Rattus_norvegicus
ENSCJAG00000021814	-	100	99.296	ENSRBIG00000039326	POLR2D	100	99.296	Rhinopithecus_bieti
ENSCJAG00000021814	-	100	99.296	ENSRROG00000023289	POLR2D	100	99.296	Rhinopithecus_roxellana
ENSCJAG00000021814	-	100	97.183	ENSSHAG00000014817	-	100	97.183	Sarcophilus_harrisii
ENSCJAG00000021814	-	92	95.420	ENSSFOG00015024204	polr2d	100	90.972	Scleropages_formosus
ENSCJAG00000021814	-	100	90.278	ENSSDUG00000006060	polr2d	100	90.278	Seriola_dumerili
ENSCJAG00000021814	-	95	92.593	ENSSLDG00000024485	polr2d	100	89.655	Seriola_lalandi_dorsalis
ENSCJAG00000021814	-	82	98.291	ENSSARG00000009037	POLR2D	100	98.291	Sorex_araneus
ENSCJAG00000021814	-	100	96.479	ENSSPUG00000014915	POLR2D	100	96.479	Sphenodon_punctatus
ENSCJAG00000021814	-	100	90.278	ENSSPAG00000013386	polr2d	100	90.278	Stegastes_partitus
ENSCJAG00000021814	-	100	99.296	ENSSSCG00000039230	POLR2D	100	99.296	Sus_scrofa
ENSCJAG00000021814	-	100	96.479	ENSTGUG00000005773	POLR2D	99	96.479	Taeniopygia_guttata
ENSCJAG00000021814	-	100	90.141	ENSTRUG00000004740	polr2d	100	90.141	Takifugu_rubripes
ENSCJAG00000021814	-	99	91.489	ENSTNIG00000011210	polr2d	99	91.489	Tetraodon_nigroviridis
ENSCJAG00000021814	-	82	99.145	ENSTBEG00000006081	POLR2D	100	99.145	Tupaia_belangeri
ENSCJAG00000021814	-	82	99.145	ENSTTRG00000010055	POLR2D	100	99.145	Tursiops_truncatus
ENSCJAG00000021814	-	92	98.462	ENSUAMG00000024374	POLR2D	98	98.462	Ursus_americanus
ENSCJAG00000021814	-	98	88.489	ENSUMAG00000008280	POLR2D	100	99.038	Ursus_maritimus
ENSCJAG00000021814	-	82	99.145	ENSVPAG00000007239	POLR2D	100	99.145	Vicugna_pacos
ENSCJAG00000021814	-	100	99.296	ENSVVUG00000008616	POLR2D	100	99.296	Vulpes_vulpes
ENSCJAG00000021814	-	100	90.141	ENSXETG00000002955	polr2d	100	90.141	Xenopus_tropicalis
ENSCJAG00000021814	-	73	94.231	ENSXCOG00000012668	polr2d	100	94.231	Xiphophorus_couchianus
ENSCJAG00000021814	-	73	94.231	ENSXMAG00000014031	polr2d	100	94.231	Xiphophorus_maculatus