EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000021963 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 1089 bases
Position: chrNTIC01001113.1:71012671-71013759
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000040642	Exo_endo_phos	PF03372.23	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000042948	-	1089	-	ENSCJAP00000040642	362 (aa)	-	F7I9F9

Gene Model

Click here to download ENSCJAG00000021963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000021963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000021963	-	100	98.619	ENSCJAG00000006074	TDP2	100	98.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000021963	-	100	90.608	ENSG00000111802	TDP2	100	90.608	Homo_sapiens
ENSCJAG00000021963	-	72	53.585	ENSAPOG00000018379	-	91	53.585	Acanthochromis_polyacanthus
ENSCJAG00000021963	-	77	85.971	ENSAMEG00000010230	TDP2	99	85.971	Ailuropoda_melanoleuca
ENSCJAG00000021963	-	70	53.125	ENSAPEG00000004208	-	91	53.125	Amphiprion_percula
ENSCJAG00000021963	-	74	49.259	ENSATEG00000010663	-	89	47.080	Anabas_testudineus
ENSCJAG00000021963	-	93	65.075	ENSACAG00000002332	TDP2	94	63.689	Anolis_carolinensis
ENSCJAG00000021963	-	100	95.028	ENSANAG00000020033	TDP2	100	95.028	Aotus_nancymaae
ENSCJAG00000021963	-	80	47.782	ENSACLG00000016132	tdp2b	98	47.782	Astatotilapia_calliptera
ENSCJAG00000021963	-	73	53.731	ENSACLG00000016148	tdp2b	95	53.731	Astatotilapia_calliptera
ENSCJAG00000021963	-	80	47.440	ENSACLG00000016174	tdp2b	98	47.440	Astatotilapia_calliptera
ENSCJAG00000021963	-	77	47.687	ENSAMXG00000036549	tdp2a	92	47.687	Astyanax_mexicanus
ENSCJAG00000021963	-	95	51.587	ENSAMXG00000011775	tdp2b	99	51.587	Astyanax_mexicanus
ENSCJAG00000021963	-	94	82.507	ENSBTAG00000000365	TDP2	100	80.769	Bos_taurus
ENSCJAG00000021963	-	90	30.091	WBGene00013405	tdpt-1	85	30.091	Caenorhabditis_elegans
ENSCJAG00000021963	-	99	80.223	ENSCAFG00000010428	TDP2	100	84.503	Canis_familiaris
ENSCJAG00000021963	-	77	87.770	ENSCAFG00020009994	TDP2	96	87.770	Canis_lupus_dingo
ENSCJAG00000021963	-	82	81.395	ENSCHIG00000015294	-	95	85.000	Capra_hircus
ENSCJAG00000021963	-	85	85.437	ENSTSYG00000037199	TDP2	100	85.437	Carlito_syrichta
ENSCJAG00000021963	-	100	84.254	ENSCPOG00000006390	TDP2	100	84.254	Cavia_porcellus
ENSCJAG00000021963	-	100	95.856	ENSCCAG00000022734	TDP2	100	95.856	Cebus_capucinus
ENSCJAG00000021963	-	100	88.122	ENSCATG00000022076	TDP2	95	89.965	Cercocebus_atys
ENSCJAG00000021963	-	100	82.044	ENSCLAG00000002072	TDP2	100	82.044	Chinchilla_lanigera
ENSCJAG00000021963	-	100	89.227	ENSCSAG00000007769	TDP2	100	89.227	Chlorocebus_sabaeus
ENSCJAG00000021963	-	95	67.826	ENSCPBG00000006551	TDP2	89	67.139	Chrysemys_picta_bellii
ENSCJAG00000021963	-	100	88.122	ENSCANG00000040122	TDP2	100	89.779	Colobus_angolensis_palliatus
ENSCJAG00000021963	-	94	67.155	ENSCGRG00001000384	Tdp2	100	63.807	Cricetulus_griseus_chok1gshd
ENSCJAG00000021963	-	94	64.516	ENSCGRG00000010250	Tdp2	95	64.841	Cricetulus_griseus_crigri
ENSCJAG00000021963	-	93	54.857	ENSCVAG00000003114	tdp2b	95	55.263	Cyprinodon_variegatus
ENSCJAG00000021963	-	68	49.388	ENSDARG00000069941	tdp2a	55	49.388	Danio_rerio
ENSCJAG00000021963	-	93	52.198	ENSDARG00000035954	tdp2b	94	52.198	Danio_rerio
ENSCJAG00000021963	-	100	83.702	ENSDNOG00000044082	TDP2	99	83.702	Dasypus_novemcinctus
ENSCJAG00000021963	-	77	84.173	ENSETEG00000019096	TDP2	100	84.173	Echinops_telfairi
ENSCJAG00000021963	-	73	52.256	ENSEBUG00000006535	tdp2a	62	52.256	Eptatretus_burgeri
ENSCJAG00000021963	-	94	84.164	ENSEASG00005007656	TDP2	100	82.044	Equus_asinus_asinus
ENSCJAG00000021963	-	94	84.164	ENSECAG00000014264	TDP2	100	82.044	Equus_caballus
ENSCJAG00000021963	-	100	78.453	ENSEEUG00000010776	TDP2	100	78.453	Erinaceus_europaeus
ENSCJAG00000021963	-	92	53.867	ENSELUG00000016449	tdp2b	95	53.867	Esox_lucius
ENSCJAG00000021963	-	85	42.271	ENSELUG00000009321	tdp2a	85	46.886	Esox_lucius
ENSCJAG00000021963	-	97	84.900	ENSFCAG00000025612	TDP2	97	84.900	Felis_catus
ENSCJAG00000021963	-	96	57.925	ENSFALG00000004710	TDP2	98	57.584	Ficedula_albicollis
ENSCJAG00000021963	-	77	85.971	ENSFDAG00000006512	TDP2	96	85.971	Fukomys_damarensis
ENSCJAG00000021963	-	68	52.419	ENSFHEG00000013560	-	84	52.419	Fundulus_heteroclitus
ENSCJAG00000021963	-	94	64.327	ENSGALG00000013637	TDP2	92	64.327	Gallus_gallus
ENSCJAG00000021963	-	96	68.208	ENSGAGG00000002853	TDP2	88	68.208	Gopherus_agassizii
ENSCJAG00000021963	-	100	90.331	ENSGGOG00000014237	TDP2	100	90.331	Gorilla_gorilla
ENSCJAG00000021963	-	53	60.209	ENSHBUG00000005421	-	79	60.209	Haplochromis_burtoni
ENSCJAG00000021963	-	96	54.247	ENSHBUG00000002714	tdp2b	99	54.247	Haplochromis_burtoni
ENSCJAG00000021963	-	100	81.215	ENSHGLG00000008655	TDP2	100	81.215	Heterocephalus_glaber_female
ENSCJAG00000021963	-	100	81.215	ENSHGLG00100019087	TDP2	100	81.215	Heterocephalus_glaber_male
ENSCJAG00000021963	-	92	54.108	ENSIPUG00000013691	tdp2b	94	54.108	Ictalurus_punctatus
ENSCJAG00000021963	-	95	65.507	ENSJJAG00000021685	Tdp2	99	65.507	Jaculus_jaculus
ENSCJAG00000021963	-	71	50.958	ENSKMAG00000015485	-	84	50.958	Kryptolebias_marmoratus
ENSCJAG00000021963	-	94	60.114	ENSLACG00000008852	TDP2	95	60.114	Latimeria_chalumnae
ENSCJAG00000021963	-	76	59.058	ENSLOCG00000005817	tdp2b	98	59.058	Lepisosteus_oculatus
ENSCJAG00000021963	-	94	85.044	ENSLAFG00000002567	TDP2	99	84.615	Loxodonta_africana
ENSCJAG00000021963	-	100	87.845	ENSMFAG00000045296	TDP2	100	89.503	Macaca_fascicularis
ENSCJAG00000021963	-	100	87.845	ENSMMUG00000009803	TDP2	100	89.503	Macaca_mulatta
ENSCJAG00000021963	-	100	87.845	ENSMNEG00000038003	TDP2	100	89.503	Macaca_nemestrina
ENSCJAG00000021963	-	100	87.845	ENSMLEG00000028883	TDP2	100	89.503	Mandrillus_leucophaeus
ENSCJAG00000021963	-	93	55.102	ENSMAMG00000013654	tdp2b	95	55.102	Mastacembelus_armatus
ENSCJAG00000021963	-	71	48.462	ENSMZEG00005004103	tdp2b	87	48.462	Maylandia_zebra
ENSCJAG00000021963	-	80	48.464	ENSMZEG00005004126	tdp2b	98	48.464	Maylandia_zebra
ENSCJAG00000021963	-	76	52.158	ENSMZEG00005004153	tdp2b	96	52.158	Maylandia_zebra
ENSCJAG00000021963	-	69	52.381	ENSMZEG00005004055	tdp2b	83	52.381	Maylandia_zebra
ENSCJAG00000021963	-	96	53.699	ENSMZEG00005003950	tdp2b	99	53.699	Maylandia_zebra
ENSCJAG00000021963	-	73	46.415	ENSMZEG00005003980	-	85	46.415	Maylandia_zebra
ENSCJAG00000021963	-	73	53.184	ENSMZEG00005004077	tdp2b	90	53.184	Maylandia_zebra
ENSCJAG00000021963	-	94	65.396	ENSMGAG00000008014	TDP2	91	65.396	Meleagris_gallopavo
ENSCJAG00000021963	-	94	66.862	ENSMAUG00000014451	Tdp2	99	63.957	Mesocricetus_auratus
ENSCJAG00000021963	-	100	86.226	ENSMICG00000000039	TDP2	100	86.226	Microcebus_murinus
ENSCJAG00000021963	-	94	68.915	ENSMOCG00000002823	Tdp2	93	68.300	Microtus_ochrogaster
ENSCJAG00000021963	-	89	63.939	ENSMODG00000011653	TDP2	99	64.545	Monodelphis_domestica
ENSCJAG00000021963	-	75	50.730	ENSMALG00000005368	-	90	50.730	Monopterus_albus
ENSCJAG00000021963	-	95	67.151	MGP_CAROLIEiJ_G0018354	Tdp2	96	65.738	Mus_caroli
ENSCJAG00000021963	-	94	68.328	ENSMUSG00000035958	Tdp2	96	66.852	Mus_musculus
ENSCJAG00000021963	-	96	65.994	MGP_PahariEiJ_G0019417	Tdp2	94	66.000	Mus_pahari
ENSCJAG00000021963	-	98	67.232	MGP_SPRETEiJ_G0019220	Tdp2	94	67.232	Mus_spretus
ENSCJAG00000021963	-	98	82.865	ENSMPUG00000004516	TDP2	99	82.865	Mustela_putorius_furo
ENSCJAG00000021963	-	97	74.716	ENSMLUG00000013506	TDP2	97	74.716	Myotis_lucifugus
ENSCJAG00000021963	-	98	61.351	ENSNGAG00000001375	Tdp2	99	61.351	Nannospalax_galili
ENSCJAG00000021963	-	100	90.331	ENSNLEG00000002447	TDP2	100	90.331	Nomascus_leucogenys
ENSCJAG00000021963	-	96	81.556	ENSOPRG00000016299	TDP2	99	81.556	Ochotona_princeps
ENSCJAG00000021963	-	77	89.568	ENSODEG00000014018	TDP2	95	89.568	Octodon_degus
ENSCJAG00000021963	-	96	83.862	ENSOCUG00000013773	TDP2	96	83.862	Oryctolagus_cuniculus
ENSCJAG00000021963	-	73	48.496	ENSORLG00000001661	-	97	48.496	Oryzias_latipes
ENSCJAG00000021963	-	73	48.496	ENSORLG00020004634	-	97	48.496	Oryzias_latipes_hni
ENSCJAG00000021963	-	73	43.071	ENSORLG00015008190	-	97	43.071	Oryzias_latipes_hsok
ENSCJAG00000021963	-	73	46.792	ENSOMEG00000015899	-	92	49.597	Oryzias_melastigma
ENSCJAG00000021963	-	100	83.702	ENSOGAG00000025303	TDP2	99	83.702	Otolemur_garnettii
ENSCJAG00000021963	-	100	90.331	ENSPPAG00000029023	TDP2	100	90.331	Pan_paniscus
ENSCJAG00000021963	-	97	84.330	ENSPPRG00000015398	TDP2	97	84.330	Panthera_pardus
ENSCJAG00000021963	-	77	85.612	ENSPTIG00000018574	TDP2	95	85.612	Panthera_tigris_altaica
ENSCJAG00000021963	-	100	90.331	ENSPTRG00000017778	TDP2	100	90.331	Pan_troglodytes
ENSCJAG00000021963	-	100	87.845	ENSPANG00000017590	TDP2	100	89.503	Papio_anubis
ENSCJAG00000021963	-	92	53.693	ENSPKIG00000006483	tdp2b	94	53.693	Paramormyrops_kingsleyae
ENSCJAG00000021963	-	81	68.151	ENSPSIG00000004948	TDP2	100	68.151	Pelodiscus_sinensis
ENSCJAG00000021963	-	94	68.915	ENSPEMG00000001788	Tdp2	94	68.195	Peromyscus_maniculatus_bairdii
ENSCJAG00000021963	-	68	47.909	ENSPMAG00000001570	tdp2b	96	47.909	Petromyzon_marinus
ENSCJAG00000021963	-	94	66.959	ENSPCIG00000007316	TDP2	90	66.860	Phascolarctos_cinereus
ENSCJAG00000021963	-	68	49.200	ENSPFOG00000017990	-	90	49.200	Poecilia_formosa
ENSCJAG00000021963	-	68	48.800	ENSPLAG00000019439	-	79	48.800	Poecilia_latipinna
ENSCJAG00000021963	-	68	49.600	ENSPMEG00000010824	-	84	49.600	Poecilia_mexicana
ENSCJAG00000021963	-	100	89.227	ENSPPYG00000016282	TDP2	92	89.227	Pongo_abelii
ENSCJAG00000021963	-	100	88.122	ENSPCOG00000021415	TDP2	100	88.122	Propithecus_coquereli
ENSCJAG00000021963	-	96	53.151	ENSPNYG00000011532	tdp2b	99	53.151	Pundamilia_nyererei
ENSCJAG00000021963	-	50	50.000	ENSPNYG00000001944	-	71	51.744	Pundamilia_nyererei
ENSCJAG00000021963	-	76	48.299	ENSPNYG00000011504	tdp2b	94	48.299	Pundamilia_nyererei
ENSCJAG00000021963	-	72	50.769	ENSPNAG00000022162	tdp2a	66	50.769	Pygocentrus_nattereri
ENSCJAG00000021963	-	94	66.862	ENSRNOG00000018246	Tdp2	95	66.286	Rattus_norvegicus
ENSCJAG00000021963	-	100	87.569	ENSRBIG00000037119	TDP2	100	89.227	Rhinopithecus_bieti
ENSCJAG00000021963	-	100	87.569	ENSRROG00000005025	TDP2	92	92.086	Rhinopithecus_roxellana
ENSCJAG00000021963	-	100	93.923	ENSSBOG00000028734	TDP2	91	95.324	Saimiri_boliviensis_boliviensis
ENSCJAG00000021963	-	98	64.972	ENSSHAG00000002506	TDP2	95	64.972	Sarcophilus_harrisii
ENSCJAG00000021963	-	70	52.381	ENSSFOG00015011322	-	71	51.984	Scleropages_formosus
ENSCJAG00000021963	-	77	77.061	ENSSARG00000013547	TDP2	100	77.061	Sorex_araneus
ENSCJAG00000021963	-	94	66.097	ENSSPUG00000008288	TDP2	98	64.820	Sphenodon_punctatus
ENSCJAG00000021963	-	100	82.320	ENSSSCG00000001092	TDP2	100	82.320	Sus_scrofa
ENSCJAG00000021963	-	72	68.199	ENSTGUG00000009035	TDP2	100	68.199	Taeniopygia_guttata
ENSCJAG00000021963	-	96	53.107	ENSTRUG00000014347	tdp2b	98	53.107	Takifugu_rubripes
ENSCJAG00000021963	-	70	51.550	ENSTRUG00000012218	-	89	51.550	Takifugu_rubripes
ENSCJAG00000021963	-	70	52.874	ENSTNIG00000010260	TDP2	99	52.874	Tetraodon_nigroviridis
ENSCJAG00000021963	-	96	53.297	ENSTNIG00000017792	tdp2b	98	53.297	Tetraodon_nigroviridis
ENSCJAG00000021963	-	94	85.044	ENSTTRG00000016376	TDP2	100	82.320	Tursiops_truncatus
ENSCJAG00000021963	-	97	79.487	ENSUAMG00000025939	TDP2	98	79.487	Ursus_americanus
ENSCJAG00000021963	-	77	85.971	ENSUMAG00000020111	TDP2	93	85.971	Ursus_maritimus
ENSCJAG00000021963	-	99	60.963	ENSXETG00000014826	tdp2	99	60.963	Xenopus_tropicalis
ENSCJAG00000021963	-	68	49.801	ENSXCOG00000010778	-	69	49.801	Xiphophorus_couchianus
ENSCJAG00000021963	-	68	49.801	ENSXMAG00000022252	-	72	49.801	Xiphophorus_maculatus