EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000022413 (Gene tree)
Gene ID: 100404468
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 5847 bases
Position: chrNTIC01000001.1:90563426-90569272
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000041035	MMR_HSR1	PF01926.23	2.5e-06	1	1
ENSCJAP00000067229	MMR_HSR1	PF01926.23	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000077701	-	1029	-	ENSCJAP00000067229	342 (aa)	-	A0A2R8NFE0
ENSCJAT00000043398	-	993	-	ENSCJAP00000041035	330 (aa)	-	F7FGT1

Gene Model

Click here to download ENSCJAG00000022413's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc04140	Autophagy - animal	KEGG
cjc04150	mTOR signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000022413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000022413	-	100	92.878	ENSCJAG00000007317	RRAGB	100	90.751
ENSCJAG00000022413	-	95	98.722	ENSCJAG00000001550	-	100	98.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000022413	-	95	98.089	ENSG00000083750	RRAGB	100	98.969	Homo_sapiens
ENSCJAG00000022413	-	95	100.000	ENSG00000155876	RRAGA	100	100.000	Homo_sapiens
ENSCJAG00000022413	-	95	96.486	ENSAPOG00000012140	rraga	99	96.486	Acanthochromis_polyacanthus
ENSCJAG00000022413	-	95	96.166	ENSACIG00000013561	rraga	99	96.166	Amphilophus_citrinellus
ENSCJAG00000022413	-	95	96.486	ENSAOCG00000002304	rraga	99	96.486	Amphiprion_ocellaris
ENSCJAG00000022413	-	95	96.486	ENSAPEG00000006571	rraga	99	96.486	Amphiprion_percula
ENSCJAG00000022413	-	95	96.486	ENSATEG00000011885	rraga	99	96.486	Anabas_testudineus
ENSCJAG00000022413	-	95	99.042	ENSANAG00000031746	-	100	99.042	Aotus_nancymaae
ENSCJAG00000022413	-	100	93.175	ENSANAG00000020912	RRAGB	100	91.040	Aotus_nancymaae
ENSCJAG00000022413	-	95	96.805	ENSACLG00000010458	rraga	99	96.805	Astatotilapia_calliptera
ENSCJAG00000022413	-	95	96.166	ENSAMXG00000030179	rraga	99	96.166	Astyanax_mexicanus
ENSCJAG00000022413	-	95	100.000	ENSBTAG00000033543	RRAGA	100	100.000	Bos_taurus
ENSCJAG00000022413	-	100	93.175	ENSBTAG00000012980	RRAGB	99	98.355	Bos_taurus
ENSCJAG00000022413	-	95	99.361	ENSBTAG00000038064	-	100	99.361	Bos_taurus
ENSCJAG00000022413	-	89	64.706	WBGene00006414	raga-1	98	64.706	Caenorhabditis_elegans
ENSCJAG00000022413	-	95	98.403	ENSCAFG00020013782	RRAGB	99	91.304	Canis_lupus_dingo
ENSCJAG00000022413	-	95	100.000	ENSCAFG00020012925	RRAGA	100	100.000	Canis_lupus_dingo
ENSCJAG00000022413	-	100	92.878	ENSCHIG00000018786	RRAGB	100	96.166	Capra_hircus
ENSCJAG00000022413	-	95	100.000	ENSCHIG00000004994	RRAGA	100	100.000	Capra_hircus
ENSCJAG00000022413	-	100	93.175	ENSTSYG00000004397	RRAGB	100	91.040	Carlito_syrichta
ENSCJAG00000022413	-	92	96.040	ENSCPOG00000011266	RRAGB	99	96.040	Cavia_porcellus
ENSCJAG00000022413	-	95	100.000	ENSCPOG00000008047	RRAGA	100	100.000	Cavia_porcellus
ENSCJAG00000022413	-	95	100.000	ENSCCAG00000000619	-	100	100.000	Cebus_capucinus
ENSCJAG00000022413	-	99	93.155	ENSCCAG00000026742	RRAGB	97	93.155	Cebus_capucinus
ENSCJAG00000022413	-	95	100.000	ENSCATG00000015913	RRAGA	100	100.000	Cercocebus_atys
ENSCJAG00000022413	-	95	99.042	ENSCLAG00000017884	RRAGA	100	99.042	Chinchilla_lanigera
ENSCJAG00000022413	-	100	91.395	ENSCLAG00000003913	RRAGB	100	89.306	Chinchilla_lanigera
ENSCJAG00000022413	-	95	100.000	ENSCHOG00000001957	RRAGA	100	100.000	Choloepus_hoffmanni
ENSCJAG00000022413	-	95	99.361	ENSCPBG00000010507	RRAGB	100	99.361	Chrysemys_picta_bellii
ENSCJAG00000022413	-	91	83.278	ENSCING00000007876	-	95	83.278	Ciona_intestinalis
ENSCJAG00000022413	-	91	82.943	ENSCSAVG00000003505	-	96	82.943	Ciona_savignyi
ENSCJAG00000022413	-	100	93.175	ENSCANG00000017510	RRAGB	100	90.751	Colobus_angolensis_palliatus
ENSCJAG00000022413	-	95	100.000	ENSCANG00000038134	RRAGA	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000022413	-	95	96.815	ENSCGRG00001013394	Rragb	99	97.697	Cricetulus_griseus_chok1gshd
ENSCJAG00000022413	-	91	100.000	ENSCGRG00000003443	Rraga	96	100.000	Cricetulus_griseus_crigri
ENSCJAG00000022413	-	92	97.697	ENSCGRG00000006827	Rragb	99	97.697	Cricetulus_griseus_crigri
ENSCJAG00000022413	-	95	96.486	ENSCSEG00000014142	rraga	99	96.486	Cynoglossus_semilaevis
ENSCJAG00000022413	-	95	96.166	ENSCVAG00000021719	rraga	99	96.166	Cyprinodon_variegatus
ENSCJAG00000022413	-	95	100.000	ENSDNOG00000015581	RRAGA	100	100.000	Dasypus_novemcinctus
ENSCJAG00000022413	-	95	100.000	ENSDORG00000015994	Rraga	100	100.000	Dipodomys_ordii
ENSCJAG00000022413	-	98	94.099	ENSDORG00000015932	Rragb	95	97.720	Dipodomys_ordii
ENSCJAG00000022413	-	90	80.743	FBgn0037647	RagA-B	95	80.743	Drosophila_melanogaster
ENSCJAG00000022413	-	92	90.132	ENSEBUG00000008941	rraga	86	89.457	Eptatretus_burgeri
ENSCJAG00000022413	-	86	98.239	ENSEASG00005006973	RRAGB	83	98.239	Equus_asinus_asinus
ENSCJAG00000022413	-	98	99.071	ENSEASG00005019266	RRAGA	95	99.071	Equus_asinus_asinus
ENSCJAG00000022413	-	97	99.687	ENSECAG00000005729	RRAGA	94	99.687	Equus_caballus
ENSCJAG00000022413	-	100	93.175	ENSECAG00000006020	RRAGB	100	90.751	Equus_caballus
ENSCJAG00000022413	-	95	100.000	ENSEEUG00000009466	RRAGA	100	100.000	Erinaceus_europaeus
ENSCJAG00000022413	-	95	96.805	ENSELUG00000009655	rraga	99	96.805	Esox_lucius
ENSCJAG00000022413	-	95	100.000	ENSFCAG00000022742	RRAGA	100	100.000	Felis_catus
ENSCJAG00000022413	-	100	92.878	ENSFCAG00000013932	RRAGB	100	90.751	Felis_catus
ENSCJAG00000022413	-	100	94.895	ENSFALG00000011263	RRAGB	88	97.523	Ficedula_albicollis
ENSCJAG00000022413	-	92	98.033	ENSFDAG00000018157	RRAGB	99	98.033	Fukomys_damarensis
ENSCJAG00000022413	-	95	96.486	ENSFHEG00000002145	rraga	99	96.486	Fundulus_heteroclitus
ENSCJAG00000022413	-	95	95.860	ENSGMOG00000004849	rraga	99	95.860	Gadus_morhua
ENSCJAG00000022413	-	95	99.361	ENSGALG00000041226	RRAGB	100	99.361	Gallus_gallus
ENSCJAG00000022413	-	94	96.774	ENSGAFG00000006618	rraga	99	96.774	Gambusia_affinis
ENSCJAG00000022413	-	95	95.556	ENSGACG00000020342	rraga	99	95.556	Gasterosteus_aculeatus
ENSCJAG00000022413	-	95	99.361	ENSGAGG00000012251	RRAGB	100	99.361	Gopherus_agassizii
ENSCJAG00000022413	-	95	98.089	ENSGGOG00000011501	RRAGB	100	90.751	Gorilla_gorilla
ENSCJAG00000022413	-	95	100.000	ENSGGOG00000021937	RRAGA	100	100.000	Gorilla_gorilla
ENSCJAG00000022413	-	92	92.384	ENSHBUG00000004494	rraga	92	92.384	Haplochromis_burtoni
ENSCJAG00000022413	-	95	97.452	ENSHGLG00000000313	RRAGB	99	97.377	Heterocephalus_glaber_female
ENSCJAG00000022413	-	95	99.681	ENSHGLG00100020985	RRAGA	100	99.681	Heterocephalus_glaber_male
ENSCJAG00000022413	-	95	96.166	ENSHCOG00000006819	rraga	99	96.166	Hippocampus_comes
ENSCJAG00000022413	-	95	96.486	ENSIPUG00000014734	Rraga	99	96.486	Ictalurus_punctatus
ENSCJAG00000022413	-	91	98.339	ENSSTOG00000004660	RRAGB	100	98.339	Ictidomys_tridecemlineatus
ENSCJAG00000022413	-	95	100.000	ENSJJAG00000008212	Rraga	100	100.000	Jaculus_jaculus
ENSCJAG00000022413	-	94	96.463	ENSJJAG00000021386	Rragb	99	96.463	Jaculus_jaculus
ENSCJAG00000022413	-	95	96.486	ENSKMAG00000005709	rraga	99	96.486	Kryptolebias_marmoratus
ENSCJAG00000022413	-	95	96.486	ENSLBEG00000004506	rraga	99	96.486	Labrus_bergylta
ENSCJAG00000022413	-	95	98.403	ENSLACG00000016067	RRAGB	100	98.403	Latimeria_chalumnae
ENSCJAG00000022413	-	95	96.805	ENSLOCG00000014979	rraga	99	96.805	Lepisosteus_oculatus
ENSCJAG00000022413	-	95	99.681	ENSLAFG00000011082	RRAGA	100	99.681	Loxodonta_africana
ENSCJAG00000022413	-	100	93.472	ENSMFAG00000041833	RRAGB	91	98.089	Macaca_fascicularis
ENSCJAG00000022413	-	95	100.000	ENSMFAG00000030433	RRAGA	100	100.000	Macaca_fascicularis
ENSCJAG00000022413	-	92	98.033	ENSMMUG00000017635	RRAGB	99	98.033	Macaca_mulatta
ENSCJAG00000022413	-	97	99.688	ENSMMUG00000018395	RRAGA	93	99.381	Macaca_mulatta
ENSCJAG00000022413	-	95	100.000	ENSMNEG00000019531	RRAGA	100	100.000	Macaca_nemestrina
ENSCJAG00000022413	-	95	100.000	ENSMLEG00000025200	RRAGA	100	100.000	Mandrillus_leucophaeus
ENSCJAG00000022413	-	100	93.472	ENSMLEG00000004971	RRAGB	91	98.089	Mandrillus_leucophaeus
ENSCJAG00000022413	-	95	96.166	ENSMAMG00000012091	rraga	99	96.166	Mastacembelus_armatus
ENSCJAG00000022413	-	95	96.805	ENSMZEG00005015085	rraga	99	96.805	Maylandia_zebra
ENSCJAG00000022413	-	95	99.361	ENSMGAG00000005575	RRAGB	100	99.361	Meleagris_gallopavo
ENSCJAG00000022413	-	95	100.000	ENSMAUG00000003702	Rraga	100	100.000	Mesocricetus_auratus
ENSCJAG00000022413	-	95	98.089	ENSMICG00000035059	RRAGB	100	90.751	Microcebus_murinus
ENSCJAG00000022413	-	95	100.000	ENSMICG00000016534	RRAGA	100	100.000	Microcebus_murinus
ENSCJAG00000022413	-	92	98.026	ENSMOCG00000010568	Rragb	98	98.026	Microtus_ochrogaster
ENSCJAG00000022413	-	93	100.000	ENSMODG00000011337	RRAGB	100	100.000	Monodelphis_domestica
ENSCJAG00000022413	-	95	96.486	ENSMALG00000020662	rraga	99	96.486	Monopterus_albus
ENSCJAG00000022413	-	95	100.000	MGP_CAROLIEiJ_G0026131	Rraga	100	100.000	Mus_caroli
ENSCJAG00000022413	-	95	100.000	ENSMUSG00000070934	Rraga	100	100.000	Mus_musculus
ENSCJAG00000022413	-	95	100.000	MGP_PahariEiJ_G0028469	Rraga	100	100.000	Mus_pahari
ENSCJAG00000022413	-	95	100.000	MGP_SPRETEiJ_G0027096	Rraga	100	100.000	Mus_spretus
ENSCJAG00000022413	-	95	100.000	ENSMPUG00000019121	RRAGA	100	100.000	Mustela_putorius_furo
ENSCJAG00000022413	-	95	100.000	ENSMLUG00000010870	RRAGA	100	100.000	Myotis_lucifugus
ENSCJAG00000022413	-	93	98.046	ENSNGAG00000015964	Rragb	99	98.046	Nannospalax_galili
ENSCJAG00000022413	-	95	100.000	ENSNGAG00000007602	Rraga	100	100.000	Nannospalax_galili
ENSCJAG00000022413	-	95	96.805	ENSNBRG00000016166	rraga	99	96.805	Neolamprologus_brichardi
ENSCJAG00000022413	-	100	93.175	ENSNLEG00000016350	RRAGB	100	90.751	Nomascus_leucogenys
ENSCJAG00000022413	-	95	100.000	ENSNLEG00000018985	RRAGA	100	100.000	Nomascus_leucogenys
ENSCJAG00000022413	-	95	100.000	ENSOPRG00000005886	RRAGA	100	100.000	Ochotona_princeps
ENSCJAG00000022413	-	92	97.368	ENSODEG00000002951	RRAGB	99	94.637	Octodon_degus
ENSCJAG00000022413	-	95	99.681	ENSODEG00000020270	RRAGA	100	99.681	Octodon_degus
ENSCJAG00000022413	-	95	96.805	ENSONIG00000004447	rraga	99	96.805	Oreochromis_niloticus
ENSCJAG00000022413	-	57	97.884	ENSOANG00000031844	RRAGB	89	97.884	Ornithorhynchus_anatinus
ENSCJAG00000022413	-	95	100.000	ENSOCUG00000003506	RRAGA	100	100.000	Oryctolagus_cuniculus
ENSCJAG00000022413	-	95	96.805	ENSORLG00000009278	rraga	99	96.805	Oryzias_latipes
ENSCJAG00000022413	-	95	96.805	ENSORLG00020001597	rraga	99	96.805	Oryzias_latipes_hni
ENSCJAG00000022413	-	95	96.805	ENSORLG00015005697	rraga	99	96.805	Oryzias_latipes_hsok
ENSCJAG00000022413	-	95	96.486	ENSOMEG00000005139	rraga	99	96.678	Oryzias_melastigma
ENSCJAG00000022413	-	95	100.000	ENSOARG00000008644	RRAGA	100	100.000	Ovis_aries
ENSCJAG00000022413	-	96	97.468	ENSOARG00000005619	RRAGB	91	97.468	Ovis_aries
ENSCJAG00000022413	-	95	98.089	ENSPPAG00000034614	RRAGB	100	90.751	Pan_paniscus
ENSCJAG00000022413	-	95	100.000	ENSPPAG00000012463	RRAGA	100	100.000	Pan_paniscus
ENSCJAG00000022413	-	95	100.000	ENSPPRG00000021236	RRAGA	100	100.000	Panthera_pardus
ENSCJAG00000022413	-	100	93.175	ENSPPRG00000021943	RRAGB	100	91.040	Panthera_pardus
ENSCJAG00000022413	-	96	93.538	ENSPTIG00000005300	RRAGB	97	91.317	Panthera_tigris_altaica
ENSCJAG00000022413	-	95	98.089	ENSPTRG00000021955	RRAGB	100	90.751	Pan_troglodytes
ENSCJAG00000022413	-	99	97.273	ENSPTRG00000020798	RRAGA	97	97.273	Pan_troglodytes
ENSCJAG00000022413	-	100	93.472	ENSPANG00000003594	RRAGB	91	98.089	Papio_anubis
ENSCJAG00000022413	-	95	100.000	ENSPANG00000000085	RRAGA	100	100.000	Papio_anubis
ENSCJAG00000022413	-	95	96.805	ENSPKIG00000021851	rraga	99	96.805	Paramormyrops_kingsleyae
ENSCJAG00000022413	-	95	99.361	ENSPSIG00000012621	RRAGB	100	99.361	Pelodiscus_sinensis
ENSCJAG00000022413	-	95	96.166	ENSPMGG00000009530	rraga	99	96.166	Periophthalmus_magnuspinnatus
ENSCJAG00000022413	-	98	98.148	ENSPCIG00000010545	RRAGB	96	98.148	Phascolarctos_cinereus
ENSCJAG00000022413	-	95	95.873	ENSPFOG00000019453	rraga	99	95.873	Poecilia_formosa
ENSCJAG00000022413	-	95	96.166	ENSPLAG00000006541	rraga	99	96.166	Poecilia_latipinna
ENSCJAG00000022413	-	95	96.166	ENSPMEG00000008057	rraga	99	96.166	Poecilia_mexicana
ENSCJAG00000022413	-	95	96.166	ENSPREG00000021154	rraga	99	96.166	Poecilia_reticulata
ENSCJAG00000022413	-	100	93.175	ENSPPYG00000020398	RRAGB	100	90.751	Pongo_abelii
ENSCJAG00000022413	-	95	100.000	ENSPPYG00000019196	RRAGA	100	100.000	Pongo_abelii
ENSCJAG00000022413	-	95	100.000	ENSPCAG00000003962	RRAGA	100	100.000	Procavia_capensis
ENSCJAG00000022413	-	95	100.000	ENSPCOG00000013740	RRAGA	100	100.000	Propithecus_coquereli
ENSCJAG00000022413	-	95	98.089	ENSPCOG00000009451	RRAGB	100	91.040	Propithecus_coquereli
ENSCJAG00000022413	-	95	96.805	ENSPNYG00000021130	rraga	99	96.805	Pundamilia_nyererei
ENSCJAG00000022413	-	95	91.374	ENSPNAG00000011028	rraga	99	91.401	Pygocentrus_nattereri
ENSCJAG00000022413	-	95	100.000	ENSRNOG00000007051	Rraga	100	100.000	Rattus_norvegicus
ENSCJAG00000022413	-	95	100.000	ENSRBIG00000003572	RRAGA	100	100.000	Rhinopithecus_bieti
ENSCJAG00000022413	-	92	79.672	ENSRBIG00000031864	RRAGB	96	79.672	Rhinopithecus_bieti
ENSCJAG00000022413	-	95	100.000	ENSRROG00000002426	RRAGA	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000022413	-	88	51.623	YML121W	-	98	51.623	Saccharomyces_cerevisiae
ENSCJAG00000022413	-	95	100.000	ENSSBOG00000008170	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000022413	-	100	93.175	ENSSBOG00000012810	RRAGB	100	91.040	Saimiri_boliviensis_boliviensis
ENSCJAG00000022413	-	98	98.148	ENSSHAG00000001266	-	96	97.538	Sarcophilus_harrisii
ENSCJAG00000022413	-	95	96.166	ENSSFOG00015011428	rraga	99	96.166	Scleropages_formosus
ENSCJAG00000022413	-	95	96.486	ENSSMAG00000017797	rraga	99	96.486	Scophthalmus_maximus
ENSCJAG00000022413	-	95	96.486	ENSSDUG00000014535	rraga	99	96.486	Seriola_dumerili
ENSCJAG00000022413	-	95	96.486	ENSSLDG00000014834	rraga	99	96.486	Seriola_lalandi_dorsalis
ENSCJAG00000022413	-	92	97.697	ENSSPUG00000019253	RRAGB	100	97.697	Sphenodon_punctatus
ENSCJAG00000022413	-	95	96.486	ENSSPAG00000009979	rraga	99	96.486	Stegastes_partitus
ENSCJAG00000022413	-	95	100.000	ENSSSCG00000005174	RRAGA	100	100.000	Sus_scrofa
ENSCJAG00000022413	-	95	98.089	ENSSSCG00000037228	RRAGB	96	98.089	Sus_scrofa
ENSCJAG00000022413	-	95	99.045	ENSTGUG00000005543	RRAGB	100	99.045	Taeniopygia_guttata
ENSCJAG00000022413	-	95	96.486	ENSTRUG00000013796	rraga	99	96.486	Takifugu_rubripes
ENSCJAG00000022413	-	95	96.805	ENSTNIG00000011814	rraga	99	96.805	Tetraodon_nigroviridis
ENSCJAG00000022413	-	100	93.175	ENSUAMG00000004721	RRAGB	100	91.040	Ursus_americanus
ENSCJAG00000022413	-	92	100.000	ENSUAMG00000001776	RRAGA	98	100.000	Ursus_americanus
ENSCJAG00000022413	-	100	93.175	ENSUMAG00000024099	RRAGB	100	91.040	Ursus_maritimus
ENSCJAG00000022413	-	98	96.979	ENSVVUG00000000604	RRAGA	96	96.979	Vulpes_vulpes
ENSCJAG00000022413	-	85	98.936	ENSVVUG00000015486	RRAGB	84	90.764	Vulpes_vulpes
ENSCJAG00000022413	-	95	98.083	ENSXETG00000000887	rraga	100	98.083	Xenopus_tropicalis
ENSCJAG00000022413	-	95	96.166	ENSXMAG00000012105	rraga	99	96.166	Xiphophorus_maculatus