EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000023088 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 486 bases
Position: chrNTIC01022223.1:132427212-132427697
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000041621	Ribosomal_L27	PF01016.19	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000044073	-	486	-	ENSCJAP00000041621	161 (aa)	-	F7DEQ0

Gene Model

Click here to download ENSCJAG00000023088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000023088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000023088	-	90	88.276	ENSCJAG00000043312	-	100	88.276
ENSCJAG00000023088	-	91	91.156	ENSCJAG00000018851	-	99	91.156
ENSCJAG00000023088	-	91	90.476	ENSCJAG00000023356	-	99	90.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000023088	-	91	87.755	ENSG00000108826	MRPL27	100	89.247	Homo_sapiens
ENSCJAG00000023088	-	76	64.754	ENSAPOG00000000462	mrpl27	81	64.754	Acanthochromis_polyacanthus
ENSCJAG00000023088	-	91	78.231	ENSAMEG00000011876	MRPL27	99	78.231	Ailuropoda_melanoleuca
ENSCJAG00000023088	-	84	58.824	ENSACIG00000023215	mrpl27	95	58.824	Amphilophus_citrinellus
ENSCJAG00000023088	-	76	61.475	ENSAOCG00000005820	mrpl27	87	61.475	Amphiprion_ocellaris
ENSCJAG00000023088	-	76	60.656	ENSAPEG00000018214	mrpl27	85	60.656	Amphiprion_percula
ENSCJAG00000023088	-	76	64.754	ENSATEG00000023863	mrpl27	83	64.754	Anabas_testudineus
ENSCJAG00000023088	-	88	63.265	ENSACAG00000005266	MRPL27	99	63.265	Anolis_carolinensis
ENSCJAG00000023088	-	91	93.878	ENSANAG00000007800	MRPL27	99	93.878	Aotus_nancymaae
ENSCJAG00000023088	-	83	62.963	ENSACLG00000024891	mrpl27	92	62.963	Astatotilapia_calliptera
ENSCJAG00000023088	-	91	80.272	ENSBTAG00000021720	MRPL27	99	80.272	Bos_taurus
ENSCJAG00000023088	-	84	81.481	ENSCAFG00000017031	MRPL27	99	79.054	Canis_familiaris
ENSCJAG00000023088	-	81	81.538	ENSCAFG00020023525	-	92	78.231	Canis_lupus_dingo
ENSCJAG00000023088	-	78	71.429	ENSCAFG00020025985	-	83	71.429	Canis_lupus_dingo
ENSCJAG00000023088	-	91	78.912	ENSCHIG00000007881	MRPL27	99	78.912	Capra_hircus
ENSCJAG00000023088	-	91	85.034	ENSTSYG00000012176	MRPL27	99	85.034	Carlito_syrichta
ENSCJAG00000023088	-	84	79.259	ENSCAPG00000012767	MRPL27	93	79.259	Cavia_aperea
ENSCJAG00000023088	-	84	79.259	ENSCPOG00000025999	MRPL27	99	76.190	Cavia_porcellus
ENSCJAG00000023088	-	79	81.890	ENSCCAG00000026459	-	100	81.890	Cebus_capucinus
ENSCJAG00000023088	-	91	91.156	ENSCCAG00000027809	-	99	91.156	Cebus_capucinus
ENSCJAG00000023088	-	91	87.755	ENSCATG00000028901	MRPL27	99	87.755	Cercocebus_atys
ENSCJAG00000023088	-	91	79.592	ENSCLAG00000012478	MRPL27	99	79.592	Chinchilla_lanigera
ENSCJAG00000023088	-	91	87.075	ENSCSAG00000005396	MRPL27	99	87.075	Chlorocebus_sabaeus
ENSCJAG00000023088	-	90	77.931	ENSCHOG00000005103	MRPL27	91	77.931	Choloepus_hoffmanni
ENSCJAG00000023088	-	82	65.152	ENSCPBG00000028179	MRPL27	95	64.394	Chrysemys_picta_bellii
ENSCJAG00000023088	-	68	40.000	ENSCSAVG00000011477	-	71	40.000	Ciona_savignyi
ENSCJAG00000023088	-	91	86.395	ENSCANG00000034874	MRPL27	100	88.172	Colobus_angolensis_palliatus
ENSCJAG00000023088	-	91	74.658	ENSCGRG00001018944	Mrpl27	92	74.658	Cricetulus_griseus_chok1gshd
ENSCJAG00000023088	-	83	69.925	ENSCGRG00000008284	-	99	69.925	Cricetulus_griseus_crigri
ENSCJAG00000023088	-	91	78.231	ENSCGRG00000002582	-	99	78.231	Cricetulus_griseus_crigri
ENSCJAG00000023088	-	89	55.556	ENSCSEG00000002853	mrpl27	98	55.556	Cynoglossus_semilaevis
ENSCJAG00000023088	-	88	57.042	ENSCVAG00000014436	mrpl27	59	57.042	Cyprinodon_variegatus
ENSCJAG00000023088	-	91	60.811	ENSDARG00000032985	mrpl27	99	60.811	Danio_rerio
ENSCJAG00000023088	-	91	79.592	ENSDNOG00000023845	MRPL27	99	79.592	Dasypus_novemcinctus
ENSCJAG00000023088	-	56	80.000	ENSDORG00000001026	Mrpl27	95	80.000	Dipodomys_ordii
ENSCJAG00000023088	-	91	80.952	ENSETEG00000014252	-	99	80.952	Echinops_telfairi
ENSCJAG00000023088	-	73	77.311	ENSETEG00000004969	-	100	77.311	Echinops_telfairi
ENSCJAG00000023088	-	91	80.272	ENSEASG00005018616	MRPL27	99	80.272	Equus_asinus_asinus
ENSCJAG00000023088	-	91	80.272	ENSECAG00000016779	MRPL27	99	80.272	Equus_caballus
ENSCJAG00000023088	-	82	71.970	ENSEEUG00000011738	-	100	71.970	Erinaceus_europaeus
ENSCJAG00000023088	-	91	76.871	ENSEEUG00000010549	-	99	76.871	Erinaceus_europaeus
ENSCJAG00000023088	-	66	71.698	ENSEEUG00000010178	-	100	71.698	Erinaceus_europaeus
ENSCJAG00000023088	-	75	63.636	ENSELUG00000023147	mrpl27	90	63.636	Esox_lucius
ENSCJAG00000023088	-	84	80.000	ENSFCAG00000037928	MRPL27	99	78.231	Felis_catus
ENSCJAG00000023088	-	82	63.636	ENSFALG00000001307	MRPL27	89	63.636	Ficedula_albicollis
ENSCJAG00000023088	-	91	78.912	ENSFDAG00000018359	MRPL27	99	78.912	Fukomys_damarensis
ENSCJAG00000023088	-	90	56.849	ENSFHEG00000007108	mrpl27	99	56.849	Fundulus_heteroclitus
ENSCJAG00000023088	-	89	56.250	ENSGMOG00000000545	mrpl27	98	56.250	Gadus_morhua
ENSCJAG00000023088	-	82	64.394	ENSGALG00000038812	MRPL27	95	64.394	Gallus_gallus
ENSCJAG00000023088	-	90	60.274	ENSGACG00000015241	mrpl27	99	60.274	Gasterosteus_aculeatus
ENSCJAG00000023088	-	53	67.059	ENSGAGG00000014297	MRPL27	92	67.059	Gopherus_agassizii
ENSCJAG00000023088	-	91	87.075	ENSGGOG00000011954	MRPL27	100	88.172	Gorilla_gorilla
ENSCJAG00000023088	-	83	62.963	ENSHBUG00000019735	mrpl27	92	62.963	Haplochromis_burtoni
ENSCJAG00000023088	-	91	78.912	ENSHGLG00000016030	MRPL27	99	78.912	Heterocephalus_glaber_female
ENSCJAG00000023088	-	91	78.912	ENSHGLG00100019037	MRPL27	99	78.912	Heterocephalus_glaber_male
ENSCJAG00000023088	-	84	57.664	ENSHCOG00000002137	mrpl27	99	57.664	Hippocampus_comes
ENSCJAG00000023088	-	82	59.848	ENSIPUG00000003799	mrpl27	90	59.848	Ictalurus_punctatus
ENSCJAG00000023088	-	91	78.912	ENSSTOG00000008896	MRPL27	99	78.912	Ictidomys_tridecemlineatus
ENSCJAG00000023088	-	91	78.912	ENSJJAG00000006271	Mrpl27	99	78.912	Jaculus_jaculus
ENSCJAG00000023088	-	90	57.534	ENSKMAG00000002075	mrpl27	99	57.534	Kryptolebias_marmoratus
ENSCJAG00000023088	-	90	58.219	ENSLBEG00000027521	mrpl27	99	58.219	Labrus_bergylta
ENSCJAG00000023088	-	89	61.111	ENSLACG00000015193	MRPL27	95	61.111	Latimeria_chalumnae
ENSCJAG00000023088	-	91	57.823	ENSLOCG00000011095	mrpl27	99	57.823	Lepisosteus_oculatus
ENSCJAG00000023088	-	85	84.672	ENSLAFG00000018289	MRPL27	99	82.313	Loxodonta_africana
ENSCJAG00000023088	-	91	83.673	ENSMFAG00000008788	-	99	83.673	Macaca_fascicularis
ENSCJAG00000023088	-	91	87.075	ENSMFAG00000031691	MRPL27	99	87.075	Macaca_fascicularis
ENSCJAG00000023088	-	88	85.315	ENSMMUG00000017231	-	88	85.315	Macaca_mulatta
ENSCJAG00000023088	-	91	83.673	ENSMMUG00000030700	-	99	83.673	Macaca_mulatta
ENSCJAG00000023088	-	91	87.755	ENSMNEG00000020495	MRPL27	100	90.323	Macaca_nemestrina
ENSCJAG00000023088	-	91	87.755	ENSMLEG00000038438	MRPL27	100	90.323	Mandrillus_leucophaeus
ENSCJAG00000023088	-	91	58.108	ENSMAMG00000020279	mrpl27	99	58.108	Mastacembelus_armatus
ENSCJAG00000023088	-	83	62.963	ENSMZEG00005003425	mrpl27	92	62.963	Maylandia_zebra
ENSCJAG00000023088	-	83	63.433	ENSMGAG00000009149	MRPL27	92	63.433	Meleagris_gallopavo
ENSCJAG00000023088	-	91	80.272	ENSMAUG00000015242	Mrpl27	100	82.836	Mesocricetus_auratus
ENSCJAG00000023088	-	91	86.395	ENSMICG00000009698	MRPL27	99	86.395	Microcebus_murinus
ENSCJAG00000023088	-	91	78.912	ENSMOCG00000013199	-	99	78.912	Microtus_ochrogaster
ENSCJAG00000023088	-	78	73.810	ENSMOCG00000013020	-	98	73.810	Microtus_ochrogaster
ENSCJAG00000023088	-	81	49.618	ENSMMOG00000000774	mrpl27	87	49.618	Mola_mola
ENSCJAG00000023088	-	84	75.000	ENSMODG00000020899	MRPL27	84	75.000	Monodelphis_domestica
ENSCJAG00000023088	-	89	54.167	ENSMALG00000015780	mrpl27	100	54.167	Monopterus_albus
ENSCJAG00000023088	-	91	77.551	MGP_CAROLIEiJ_G0016989	Mrpl27	99	77.551	Mus_caroli
ENSCJAG00000023088	-	91	78.231	ENSMUSG00000024414	Mrpl27	99	78.231	Mus_musculus
ENSCJAG00000023088	-	84	79.259	MGP_PahariEiJ_G0018120	Mrpl27	99	76.190	Mus_pahari
ENSCJAG00000023088	-	84	80.000	MGP_SPRETEiJ_G0017835	Mrpl27	99	76.871	Mus_spretus
ENSCJAG00000023088	-	84	79.259	ENSMPUG00000015445	MRPL27	99	77.551	Mustela_putorius_furo
ENSCJAG00000023088	-	91	81.633	ENSMLUG00000005539	MRPL27	99	81.633	Myotis_lucifugus
ENSCJAG00000023088	-	84	80.741	ENSNGAG00000011345	Mrpl27	99	78.231	Nannospalax_galili
ENSCJAG00000023088	-	87	59.574	ENSNBRG00000011848	mrpl27	100	59.574	Neolamprologus_brichardi
ENSCJAG00000023088	-	89	87.500	ENSNLEG00000009044	MRPL27	100	89.247	Nomascus_leucogenys
ENSCJAG00000023088	-	81	75.573	ENSMEUG00000004697	MRPL27	98	75.573	Notamacropus_eugenii
ENSCJAG00000023088	-	83	80.597	ENSOPRG00000013236	MRPL27	85	80.597	Ochotona_princeps
ENSCJAG00000023088	-	91	76.871	ENSODEG00000016720	MRPL27	99	76.871	Octodon_degus
ENSCJAG00000023088	-	86	60.714	ENSONIG00000019508	mrpl27	95	60.714	Oreochromis_niloticus
ENSCJAG00000023088	-	75	70.248	ENSOANG00000030806	MRPL27	80	70.229	Ornithorhynchus_anatinus
ENSCJAG00000023088	-	84	80.741	ENSOCUG00000004601	MRPL27	99	78.912	Oryctolagus_cuniculus
ENSCJAG00000023088	-	80	58.140	ENSORLG00000014738	mrpl27	88	58.140	Oryzias_latipes
ENSCJAG00000023088	-	80	58.140	ENSORLG00020015667	mrpl27	87	58.140	Oryzias_latipes_hni
ENSCJAG00000023088	-	74	60.504	ENSORLG00015013520	mrpl27	80	60.504	Oryzias_latipes_hsok
ENSCJAG00000023088	-	90	56.849	ENSOMEG00000018425	mrpl27	88	56.849	Oryzias_melastigma
ENSCJAG00000023088	-	91	78.231	ENSOGAG00000029263	-	99	78.231	Otolemur_garnettii
ENSCJAG00000023088	-	89	72.917	ENSOGAG00000033367	-	97	72.917	Otolemur_garnettii
ENSCJAG00000023088	-	90	80.690	ENSOGAG00000005385	-	97	80.690	Otolemur_garnettii
ENSCJAG00000023088	-	91	79.592	ENSOARG00000004651	MRPL27	99	79.592	Ovis_aries
ENSCJAG00000023088	-	91	87.755	ENSPPAG00000037578	MRPL27	99	87.755	Pan_paniscus
ENSCJAG00000023088	-	91	77.551	ENSPPRG00000009444	MRPL27	100	83.871	Panthera_pardus
ENSCJAG00000023088	-	58	83.871	ENSPTIG00000019684	MRPL27	100	83.871	Panthera_tigris_altaica
ENSCJAG00000023088	-	91	87.755	ENSPTRG00000009396	MRPL27	99	87.755	Pan_troglodytes
ENSCJAG00000023088	-	91	87.755	ENSPANG00000022492	-	99	87.755	Papio_anubis
ENSCJAG00000023088	-	91	87.075	ENSPANG00000019883	-	99	87.075	Papio_anubis
ENSCJAG00000023088	-	88	60.839	ENSPKIG00000009252	MRPL27	85	65.323	Paramormyrops_kingsleyae
ENSCJAG00000023088	-	88	60.839	ENSPKIG00000011006	mrpl27	85	65.323	Paramormyrops_kingsleyae
ENSCJAG00000023088	-	82	65.152	ENSPSIG00000006901	MRPL27	88	65.152	Pelodiscus_sinensis
ENSCJAG00000023088	-	76	62.295	ENSPMGG00000019079	mrpl27	99	56.849	Periophthalmus_magnuspinnatus
ENSCJAG00000023088	-	91	79.592	ENSPEMG00000020655	Mrpl27	99	79.592	Peromyscus_maniculatus_bairdii
ENSCJAG00000023088	-	76	61.475	ENSPFOG00000006380	mrpl27	80	61.475	Poecilia_formosa
ENSCJAG00000023088	-	76	61.475	ENSPFOG00000019153	-	80	61.475	Poecilia_formosa
ENSCJAG00000023088	-	76	62.295	ENSPLAG00000019989	mrpl27	80	62.295	Poecilia_latipinna
ENSCJAG00000023088	-	76	62.295	ENSPMEG00000002546	-	80	62.295	Poecilia_mexicana
ENSCJAG00000023088	-	76	62.295	ENSPMEG00000017133	mrpl27	80	62.295	Poecilia_mexicana
ENSCJAG00000023088	-	76	63.115	ENSPREG00000017321	mrpl27	80	63.115	Poecilia_reticulata
ENSCJAG00000023088	-	91	87.075	ENSPPYG00000008286	MRPL27	97	87.075	Pongo_abelii
ENSCJAG00000023088	-	83	80.597	ENSPCAG00000002469	MRPL27	100	80.597	Procavia_capensis
ENSCJAG00000023088	-	91	85.034	ENSPCOG00000014496	MRPL27	99	85.034	Propithecus_coquereli
ENSCJAG00000023088	-	86	76.978	ENSPVAG00000016582	MRPL27	93	74.658	Pteropus_vampyrus
ENSCJAG00000023088	-	83	62.963	ENSPNYG00000008975	mrpl27	92	62.963	Pundamilia_nyererei
ENSCJAG00000023088	-	79	61.417	ENSPNAG00000010722	mrpl27	86	61.417	Pygocentrus_nattereri
ENSCJAG00000023088	-	91	76.190	ENSRNOG00000003724	Mrpl27	99	76.190	Rattus_norvegicus
ENSCJAG00000023088	-	91	85.714	ENSRBIG00000033398	MRPL27	99	85.714	Rhinopithecus_bieti
ENSCJAG00000023088	-	91	85.714	ENSRROG00000030847	MRPL27	99	85.714	Rhinopithecus_roxellana
ENSCJAG00000023088	-	91	87.755	ENSSBOG00000016577	-	99	87.755	Saimiri_boliviensis_boliviensis
ENSCJAG00000023088	-	58	85.263	ENSSBOG00000033685	-	90	85.263	Saimiri_boliviensis_boliviensis
ENSCJAG00000023088	-	84	73.529	ENSSHAG00000004216	MRPL27	87	73.529	Sarcophilus_harrisii
ENSCJAG00000023088	-	77	65.323	ENSSFOG00015000879	mrpl27	84	65.323	Scleropages_formosus
ENSCJAG00000023088	-	84	58.824	ENSSMAG00000001706	mrpl27	99	58.824	Scophthalmus_maximus
ENSCJAG00000023088	-	86	52.381	ENSSDUG00000013202	mrpl27	96	56.667	Seriola_dumerili
ENSCJAG00000023088	-	86	52.381	ENSSLDG00000011922	mrpl27	96	56.667	Seriola_lalandi_dorsalis
ENSCJAG00000023088	-	83	55.224	ENSSARG00000000254	MRPL27	100	55.224	Sorex_araneus
ENSCJAG00000023088	-	88	59.574	ENSSPUG00000010135	MRPL27	93	59.574	Sphenodon_punctatus
ENSCJAG00000023088	-	90	57.534	ENSSPAG00000020495	mrpl27	99	57.534	Stegastes_partitus
ENSCJAG00000023088	-	91	80.952	ENSSSCG00000023783	MRPL27	99	80.952	Sus_scrofa
ENSCJAG00000023088	-	81	65.649	ENSTGUG00000008925	MRPL27	100	65.649	Taeniopygia_guttata
ENSCJAG00000023088	-	74	59.664	ENSTRUG00000024146	mrpl27	81	59.664	Takifugu_rubripes
ENSCJAG00000023088	-	75	63.710	ENSTNIG00000019792	mrpl27	99	63.710	Tetraodon_nigroviridis
ENSCJAG00000023088	-	91	83.673	ENSTBEG00000015816	MRPL27	99	83.673	Tupaia_belangeri
ENSCJAG00000023088	-	91	78.082	ENSTTRG00000000202	MRPL27	94	78.082	Tursiops_truncatus
ENSCJAG00000023088	-	91	77.551	ENSUAMG00000011300	MRPL27	99	77.551	Ursus_americanus
ENSCJAG00000023088	-	84	78.519	ENSUMAG00000014818	MRPL27	62	78.519	Ursus_maritimus
ENSCJAG00000023088	-	58	81.720	ENSVVUG00000000165	-	100	81.720	Vulpes_vulpes
ENSCJAG00000023088	-	82	59.848	ENSXETG00000027422	mrpl27	100	59.848	Xenopus_tropicalis
ENSCJAG00000023088	-	76	64.754	ENSXCOG00000003196	mrpl27	70	64.754	Xiphophorus_couchianus
ENSCJAG00000023088	-	76	64.754	ENSXMAG00000024261	mrpl27	80	64.754	Xiphophorus_maculatus