EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000023097 (Gene tree)
Gene ID: 108588051
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 723 bases
Position: chrNTIC01003335.1:51901232-51901954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000041630	LSM	PF01423.22	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000044082	-	723	-	ENSCJAP00000041630	240 (aa)	-	F7DE21

Gene Model

Click here to download ENSCJAG00000023097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000023097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000023097	-	89	85.915	ENSCJAG00000003759	-	89	85.981
ENSCJAG00000023097	-	89	85.446	ENSCJAG00000042622	-	90	85.514
ENSCJAG00000023097	-	79	92.063	ENSCJAG00000020971	-	93	92.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000023097	-	79	92.063	ENSG00000125835	SNRPB	93	92.056	Homo_sapiens
ENSCJAG00000023097	-	75	85.083	ENSAPOG00000019606	snrpb	72	84.259	Acanthochromis_polyacanthus
ENSCJAG00000023097	-	78	92.021	ENSAMEG00000011353	SNRPB	88	92.019	Ailuropoda_melanoleuca
ENSCJAG00000023097	-	73	84.571	ENSACIG00000014480	snrpb	92	83.810	Amphilophus_citrinellus
ENSCJAG00000023097	-	75	85.083	ENSAOCG00000006876	snrpb	89	84.259	Amphiprion_ocellaris
ENSCJAG00000023097	-	75	85.083	ENSAPEG00000021585	snrpb	91	84.259	Amphiprion_percula
ENSCJAG00000023097	-	75	85.635	ENSATEG00000009836	snrpb	89	83.796	Anabas_testudineus
ENSCJAG00000023097	-	75	87.293	ENSACAG00000002053	SNRPB	89	86.893	Anolis_carolinensis
ENSCJAG00000023097	-	90	86.512	ENSANAG00000036271	-	86	86.385	Aotus_nancymaae
ENSCJAG00000023097	-	89	85.514	ENSANAG00000020364	-	54	84.038	Aotus_nancymaae
ENSCJAG00000023097	-	79	92.063	ENSANAG00000024443	-	93	92.056	Aotus_nancymaae
ENSCJAG00000023097	-	75	85.083	ENSACLG00000014707	snrpb	89	84.259	Astatotilapia_calliptera
ENSCJAG00000023097	-	70	86.310	ENSAMXG00000029434	snrpb	89	85.981	Astyanax_mexicanus
ENSCJAG00000023097	-	79	92.063	ENSBTAG00000001038	SNRPB	93	92.056	Bos_taurus
ENSCJAG00000023097	-	79	92.063	ENSCAFG00000006693	-	93	92.056	Canis_familiaris
ENSCJAG00000023097	-	78	81.579	ENSCAFG00000031109	-	87	76.056	Canis_familiaris
ENSCJAG00000023097	-	79	92.063	ENSCAFG00020016981	-	89	92.056	Canis_lupus_dingo
ENSCJAG00000023097	-	79	92.063	ENSCHIG00000025449	-	93	92.056	Capra_hircus
ENSCJAG00000023097	-	79	92.063	ENSTSYG00000014498	-	93	92.056	Carlito_syrichta
ENSCJAG00000023097	-	98	70.339	ENSTSYG00000032303	-	79	72.430	Carlito_syrichta
ENSCJAG00000023097	-	78	92.021	ENSCAPG00000012669	SNRPB	93	92.019	Cavia_aperea
ENSCJAG00000023097	-	79	92.063	ENSCPOG00000039408	SNRPB	93	92.056	Cavia_porcellus
ENSCJAG00000023097	-	53	85.827	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSCJAG00000023097	-	79	92.063	ENSCCAG00000026002	SNRPB	93	92.056	Cebus_capucinus
ENSCJAG00000023097	-	79	92.063	ENSCATG00000030230	SNRPB	93	92.056	Cercocebus_atys
ENSCJAG00000023097	-	79	92.063	ENSCLAG00000012442	SNRPB	90	92.056	Chinchilla_lanigera
ENSCJAG00000023097	-	79	92.063	ENSCSAG00000010840	SNRPB	93	92.056	Chlorocebus_sabaeus
ENSCJAG00000023097	-	79	88.889	ENSCPBG00000026801	SNRPB	93	88.318	Chrysemys_picta_bellii
ENSCJAG00000023097	-	79	92.063	ENSCANG00000019461	SNRPB	93	92.056	Colobus_angolensis_palliatus
ENSCJAG00000023097	-	79	92.063	ENSCGRG00001023046	Snrpb	93	92.056	Cricetulus_griseus_chok1gshd
ENSCJAG00000023097	-	75	91.713	ENSCGRG00000010423	Snrpb	92	91.748	Cricetulus_griseus_crigri
ENSCJAG00000023097	-	76	85.246	ENSCSEG00000020328	snrpb	89	85.047	Cynoglossus_semilaevis
ENSCJAG00000023097	-	70	86.905	ENSDARG00000011125	snrpb	89	86.449	Danio_rerio
ENSCJAG00000023097	-	79	92.063	ENSDNOG00000015545	-	89	92.056	Dasypus_novemcinctus
ENSCJAG00000023097	-	70	88.095	ENSDNOG00000007896	-	88	87.850	Dasypus_novemcinctus
ENSCJAG00000023097	-	76	91.803	ENSDORG00000029558	Snrpb	90	91.827	Dipodomys_ordii
ENSCJAG00000023097	-	62	66.443	FBgn0262601	SmB	74	66.443	Drosophila_melanogaster
ENSCJAG00000023097	-	70	71.429	ENSETEG00000006830	SNRPB	94	74.766	Echinops_telfairi
ENSCJAG00000023097	-	79	91.534	ENSEASG00005012991	SNRPB	93	91.589	Equus_asinus_asinus
ENSCJAG00000023097	-	79	92.063	ENSECAG00000011944	SNRPB	93	92.056	Equus_caballus
ENSCJAG00000023097	-	79	92.063	ENSEEUG00000015568	SNRPB	75	92.056	Erinaceus_europaeus
ENSCJAG00000023097	-	60	91.724	ENSELUG00000014564	snrpb	91	84.135	Esox_lucius
ENSCJAG00000023097	-	79	92.063	ENSFCAG00000034090	-	93	92.056	Felis_catus
ENSCJAG00000023097	-	75	87.845	ENSFALG00000004866	SNRPB	89	87.379	Ficedula_albicollis
ENSCJAG00000023097	-	79	92.063	ENSFDAG00000009937	SNRPB	93	92.056	Fukomys_damarensis
ENSCJAG00000023097	-	79	88.360	ENSGALG00000035421	SNRPN	89	87.850	Gallus_gallus
ENSCJAG00000023097	-	71	85.965	ENSGAFG00000019558	snrpb	93	82.326	Gambusia_affinis
ENSCJAG00000023097	-	76	84.153	ENSGACG00000003262	snrpb	89	84.112	Gasterosteus_aculeatus
ENSCJAG00000023097	-	79	88.889	ENSGAGG00000001308	SNRPB	89	88.318	Gopherus_agassizii
ENSCJAG00000023097	-	79	92.063	ENSGGOG00000016138	SNRPB	93	92.056	Gorilla_gorilla
ENSCJAG00000023097	-	75	85.083	ENSHBUG00000008369	snrpb	89	84.259	Haplochromis_burtoni
ENSCJAG00000023097	-	79	92.063	ENSHGLG00000016241	-	93	92.056	Heterocephalus_glaber_female
ENSCJAG00000023097	-	63	86.000	ENSHGLG00000016505	-	71	86.486	Heterocephalus_glaber_female
ENSCJAG00000023097	-	79	92.063	ENSHGLG00100012877	-	93	92.056	Heterocephalus_glaber_male
ENSCJAG00000023097	-	63	86.000	ENSHGLG00100004178	-	71	86.486	Heterocephalus_glaber_male
ENSCJAG00000023097	-	76	85.246	ENSHCOG00000014888	snrpb	89	85.047	Hippocampus_comes
ENSCJAG00000023097	-	70	86.905	ENSIPUG00000024569	SNRPB	89	86.449	Ictalurus_punctatus
ENSCJAG00000023097	-	65	86.452	ENSSTOG00000027821	-	87	76.555	Ictidomys_tridecemlineatus
ENSCJAG00000023097	-	88	90.047	ENSSTOG00000033664	-	89	90.187	Ictidomys_tridecemlineatus
ENSCJAG00000023097	-	79	92.063	ENSJJAG00000024170	Snrpb	93	92.056	Jaculus_jaculus
ENSCJAG00000023097	-	72	87.209	ENSKMAG00000014494	snrpb	87	83.796	Kryptolebias_marmoratus
ENSCJAG00000023097	-	76	85.246	ENSLBEG00000005678	snrpb	89	85.047	Labrus_bergylta
ENSCJAG00000023097	-	79	85.185	ENSLACG00000011459	SNRPB	89	85.047	Latimeria_chalumnae
ENSCJAG00000023097	-	70	87.500	ENSLOCG00000002687	snrpb	89	86.916	Lepisosteus_oculatus
ENSCJAG00000023097	-	78	87.766	ENSLAFG00000017588	SNRPB	92	88.263	Loxodonta_africana
ENSCJAG00000023097	-	79	92.063	ENSMFAG00000038756	SNRPB	93	92.056	Macaca_fascicularis
ENSCJAG00000023097	-	79	92.063	ENSMMUG00000010050	SNRPB	93	92.056	Macaca_mulatta
ENSCJAG00000023097	-	79	92.063	ENSMNEG00000027954	SNRPB	93	92.056	Macaca_nemestrina
ENSCJAG00000023097	-	79	92.063	ENSMLEG00000022346	SNRPB	93	92.056	Mandrillus_leucophaeus
ENSCJAG00000023097	-	75	85.000	ENSMAMG00000009294	snrpb	86	84.186	Mastacembelus_armatus
ENSCJAG00000023097	-	75	85.083	ENSMZEG00005011856	snrpb	89	84.259	Maylandia_zebra
ENSCJAG00000023097	-	79	92.063	ENSMICG00000016519	SNRPB	93	92.056	Microcebus_murinus
ENSCJAG00000023097	-	79	85.185	ENSMICG00000015983	-	95	85.024	Microcebus_murinus
ENSCJAG00000023097	-	79	91.534	ENSMOCG00000002892	-	93	91.589	Microtus_ochrogaster
ENSCJAG00000023097	-	58	79.856	ENSMOCG00000021362	-	91	75.234	Microtus_ochrogaster
ENSCJAG00000023097	-	76	85.165	ENSMMOG00000013226	snrpb	90	84.977	Mola_mola
ENSCJAG00000023097	-	75	84.530	ENSMALG00000020839	snrpb	72	83.796	Monopterus_albus
ENSCJAG00000023097	-	79	92.063	MGP_CAROLIEiJ_G0024293	Snrpb	93	91.589	Mus_caroli
ENSCJAG00000023097	-	79	92.063	ENSMUSG00000027404	Snrpb	93	91.589	Mus_musculus
ENSCJAG00000023097	-	79	92.063	MGP_PahariEiJ_G0025738	Snrpb	93	91.589	Mus_pahari
ENSCJAG00000023097	-	79	92.063	MGP_SPRETEiJ_G0025213	Snrpb	93	91.589	Mus_spretus
ENSCJAG00000023097	-	79	92.063	ENSMPUG00000009283	SNRPB	93	92.056	Mustela_putorius_furo
ENSCJAG00000023097	-	79	88.889	ENSMLUG00000016951	SNRPB	89	89.252	Myotis_lucifugus
ENSCJAG00000023097	-	79	92.063	ENSNGAG00000012051	Snrpb	93	92.056	Nannospalax_galili
ENSCJAG00000023097	-	75	82.320	ENSNBRG00000006353	snrpb	82	81.944	Neolamprologus_brichardi
ENSCJAG00000023097	-	79	92.063	ENSNLEG00000029067	SNRPB	90	92.019	Nomascus_leucogenys
ENSCJAG00000023097	-	70	92.216	ENSMEUG00000015625	SNRPB	95	89.671	Notamacropus_eugenii
ENSCJAG00000023097	-	79	86.772	ENSODEG00000016060	-	90	88.785	Octodon_degus
ENSCJAG00000023097	-	79	92.063	ENSODEG00000004305	-	93	92.056	Octodon_degus
ENSCJAG00000023097	-	75	85.083	ENSONIG00000000248	snrpb	89	84.259	Oreochromis_niloticus
ENSCJAG00000023097	-	88	69.194	ENSOCUG00000026813	-	90	69.194	Oryctolagus_cuniculus
ENSCJAG00000023097	-	90	88.837	ENSOCUG00000021456	-	89	88.785	Oryctolagus_cuniculus
ENSCJAG00000023097	-	79	92.063	ENSOCUG00000014042	-	89	92.056	Oryctolagus_cuniculus
ENSCJAG00000023097	-	74	88.202	ENSOCUG00000022423	-	86	89.881	Oryctolagus_cuniculus
ENSCJAG00000023097	-	89	89.671	ENSOCUG00000028215	-	89	89.720	Oryctolagus_cuniculus
ENSCJAG00000023097	-	74	85.876	ENSORLG00000021862	snrpb	89	83.796	Oryzias_latipes
ENSCJAG00000023097	-	79	92.063	ENSOGAG00000016149	SNRPB	89	92.056	Otolemur_garnettii
ENSCJAG00000023097	-	79	92.063	ENSOARG00000006740	SNRPB	93	92.056	Ovis_aries
ENSCJAG00000023097	-	79	92.063	ENSPPAG00000036314	SNRPB	93	92.056	Pan_paniscus
ENSCJAG00000023097	-	79	92.063	ENSPPRG00000003233	-	93	92.056	Panthera_pardus
ENSCJAG00000023097	-	78	92.021	ENSPTIG00000007468	SNRPB	92	92.019	Panthera_tigris_altaica
ENSCJAG00000023097	-	79	92.063	ENSPTRG00000013176	SNRPB	93	92.056	Pan_troglodytes
ENSCJAG00000023097	-	79	92.063	ENSPANG00000020362	SNRPB	89	92.056	Papio_anubis
ENSCJAG00000023097	-	70	86.905	ENSPKIG00000002865	snrpb	89	85.981	Paramormyrops_kingsleyae
ENSCJAG00000023097	-	78	88.830	ENSPSIG00000014125	SNRPB	88	88.263	Pelodiscus_sinensis
ENSCJAG00000023097	-	74	83.146	ENSPMGG00000016349	snrpb	88	82.297	Periophthalmus_magnuspinnatus
ENSCJAG00000023097	-	79	92.063	ENSPEMG00000007948	Snrpb	93	92.056	Peromyscus_maniculatus_bairdii
ENSCJAG00000023097	-	70	92.216	ENSPCIG00000004694	SNRPB	88	89.671	Phascolarctos_cinereus
ENSCJAG00000023097	-	62	91.275	ENSPFOG00000011802	snrpb	88	77.209	Poecilia_formosa
ENSCJAG00000023097	-	79	92.063	ENSPPYG00000010841	SNRPB	93	92.056	Pongo_abelii
ENSCJAG00000023097	-	79	92.063	ENSPCOG00000013686	SNRPB	93	92.056	Propithecus_coquereli
ENSCJAG00000023097	-	79	91.005	ENSPVAG00000017013	SNRPB	75	91.121	Pteropus_vampyrus
ENSCJAG00000023097	-	75	85.083	ENSPNYG00000014788	snrpb	89	84.259	Pundamilia_nyererei
ENSCJAG00000023097	-	70	86.905	ENSPNAG00000016126	snrpb	89	86.449	Pygocentrus_nattereri
ENSCJAG00000023097	-	79	92.063	ENSRNOG00000006961	Snrpb	93	92.056	Rattus_norvegicus
ENSCJAG00000023097	-	70	93.452	ENSRBIG00000040505	SNRPB	93	90.654	Rhinopithecus_bieti
ENSCJAG00000023097	-	79	92.063	ENSRROG00000036094	SNRPB	93	92.056	Rhinopithecus_roxellana
ENSCJAG00000023097	-	79	92.063	ENSSBOG00000027310	SNRPB	93	92.056	Saimiri_boliviensis_boliviensis
ENSCJAG00000023097	-	70	92.857	ENSSHAG00000010394	SNRPB	89	90.187	Sarcophilus_harrisii
ENSCJAG00000023097	-	70	86.310	ENSSFOG00015002870	snrpb	89	85.981	Scleropages_formosus
ENSCJAG00000023097	-	76	85.246	ENSSMAG00000006766	snrpb	89	84.579	Scophthalmus_maximus
ENSCJAG00000023097	-	75	85.083	ENSSDUG00000018539	snrpb	89	84.259	Seriola_dumerili
ENSCJAG00000023097	-	75	85.083	ENSSLDG00000022391	snrpb	89	84.259	Seriola_lalandi_dorsalis
ENSCJAG00000023097	-	78	79.255	ENSSARG00000003084	SNRPB	91	80.751	Sorex_araneus
ENSCJAG00000023097	-	78	88.830	ENSSPUG00000015659	SNRPB	89	88.263	Sphenodon_punctatus
ENSCJAG00000023097	-	75	85.083	ENSSPAG00000021992	snrpb	89	84.259	Stegastes_partitus
ENSCJAG00000023097	-	95	73.799	ENSSSCG00000011966	-	92	70.561	Sus_scrofa
ENSCJAG00000023097	-	79	92.063	ENSSSCG00000040857	-	93	92.056	Sus_scrofa
ENSCJAG00000023097	-	78	75.532	ENSTGUG00000005684	SNRPB	89	76.526	Taeniopygia_guttata
ENSCJAG00000023097	-	76	84.699	ENSTRUG00000023094	snrpb	92	84.579	Takifugu_rubripes
ENSCJAG00000023097	-	76	84.699	ENSTNIG00000002991	snrpb	89	84.579	Tetraodon_nigroviridis
ENSCJAG00000023097	-	70	93.452	ENSUAMG00000005984	-	80	93.452	Ursus_americanus
ENSCJAG00000023097	-	58	93.525	ENSUMAG00000002123	-	89	76.190	Ursus_maritimus
ENSCJAG00000023097	-	79	91.534	ENSVVUG00000025654	-	89	91.589	Vulpes_vulpes
ENSCJAG00000023097	-	96	73.913	ENSVVUG00000010086	-	94	75.701	Vulpes_vulpes
ENSCJAG00000023097	-	62	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSCJAG00000023097	-	79	88.360	ENSXETG00000027266	snrpb	90	87.850	Xenopus_tropicalis
ENSCJAG00000023097	-	71	76.608	ENSXMAG00000028767	snrpb	86	72.381	Xiphophorus_maculatus