EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000023356 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 447 bases
Position: chrNTIC01008890.1:26568959-26569405
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000041852	Ribosomal_L27	PF01016.19	3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000044341	-	447	-	ENSCJAP00000041852	148 (aa)	-	F7DCR6

Gene Model

Click here to download ENSCJAG00000023356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000023356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000023356	-	100	99.324	ENSCJAG00000018851	-	100	99.324
ENSCJAG00000023356	-	98	96.552	ENSCJAG00000043312	-	100	96.552
ENSCJAG00000023356	-	99	90.476	ENSCJAG00000023088	-	91	90.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000023356	-	100	89.865	ENSG00000108826	MRPL27	100	91.398	Homo_sapiens
ENSCJAG00000023356	-	99	58.219	ENSAPOG00000000462	mrpl27	97	58.219	Acanthochromis_polyacanthus
ENSCJAG00000023356	-	100	81.757	ENSAMEG00000011876	MRPL27	100	81.757	Ailuropoda_melanoleuca
ENSCJAG00000023356	-	91	61.765	ENSACIG00000023215	mrpl27	95	61.765	Amphilophus_citrinellus
ENSCJAG00000023356	-	99	56.164	ENSAOCG00000005820	mrpl27	99	56.164	Amphiprion_ocellaris
ENSCJAG00000023356	-	99	56.164	ENSAPEG00000018214	mrpl27	99	56.164	Amphiprion_percula
ENSCJAG00000023356	-	99	59.864	ENSATEG00000023863	mrpl27	99	59.864	Anabas_testudineus
ENSCJAG00000023356	-	90	69.925	ENSACAG00000005266	MRPL27	90	69.925	Anolis_carolinensis
ENSCJAG00000023356	-	100	96.622	ENSANAG00000007800	MRPL27	100	96.622	Aotus_nancymaae
ENSCJAG00000023356	-	97	61.806	ENSACLG00000024891	mrpl27	97	61.806	Astatotilapia_calliptera
ENSCJAG00000023356	-	100	83.784	ENSBTAG00000021720	MRPL27	100	83.784	Bos_taurus
ENSCJAG00000023356	-	91	82.963	ENSCAFG00000017031	MRPL27	100	81.879	Canis_familiaris
ENSCJAG00000023356	-	85	73.810	ENSCAFG00020025985	-	83	73.810	Canis_lupus_dingo
ENSCJAG00000023356	-	88	83.846	ENSCAFG00020023525	-	93	81.757	Canis_lupus_dingo
ENSCJAG00000023356	-	100	82.432	ENSCHIG00000007881	MRPL27	100	82.432	Capra_hircus
ENSCJAG00000023356	-	100	87.838	ENSTSYG00000012176	MRPL27	100	87.838	Carlito_syrichta
ENSCJAG00000023356	-	96	80.986	ENSCAPG00000012767	MRPL27	97	80.986	Cavia_aperea
ENSCJAG00000023356	-	91	82.963	ENSCPOG00000025999	MRPL27	100	81.081	Cavia_porcellus
ENSCJAG00000023356	-	100	95.270	ENSCCAG00000027809	-	100	95.270	Cebus_capucinus
ENSCJAG00000023356	-	86	81.102	ENSCCAG00000026459	-	100	81.102	Cebus_capucinus
ENSCJAG00000023356	-	100	90.541	ENSCATG00000028901	MRPL27	100	90.541	Cercocebus_atys
ENSCJAG00000023356	-	100	83.784	ENSCLAG00000012478	MRPL27	100	83.784	Chinchilla_lanigera
ENSCJAG00000023356	-	100	89.865	ENSCSAG00000005396	MRPL27	100	89.865	Chlorocebus_sabaeus
ENSCJAG00000023356	-	96	83.099	ENSCHOG00000005103	MRPL27	89	83.099	Choloepus_hoffmanni
ENSCJAG00000023356	-	89	65.909	ENSCPBG00000028179	MRPL27	95	65.152	Chrysemys_picta_bellii
ENSCJAG00000023356	-	91	38.406	ENSCSAVG00000011477	-	87	38.406	Ciona_savignyi
ENSCJAG00000023356	-	100	89.189	ENSCANG00000034874	MRPL27	100	91.398	Colobus_angolensis_palliatus
ENSCJAG00000023356	-	95	80.142	ENSCGRG00001018944	Mrpl27	89	80.142	Cricetulus_griseus_chok1gshd
ENSCJAG00000023356	-	100	81.757	ENSCGRG00000002582	-	100	81.757	Cricetulus_griseus_crigri
ENSCJAG00000023356	-	90	72.932	ENSCGRG00000008284	-	99	72.932	Cricetulus_griseus_crigri
ENSCJAG00000023356	-	100	57.333	ENSCSEG00000002853	mrpl27	100	57.333	Cynoglossus_semilaevis
ENSCJAG00000023356	-	100	58.108	ENSCVAG00000014436	mrpl27	62	58.108	Cyprinodon_variegatus
ENSCJAG00000023356	-	99	63.514	ENSDARG00000032985	mrpl27	99	63.514	Danio_rerio
ENSCJAG00000023356	-	100	82.432	ENSDNOG00000023845	MRPL27	100	82.432	Dasypus_novemcinctus
ENSCJAG00000023356	-	61	84.444	ENSDORG00000001026	Mrpl27	95	84.444	Dipodomys_ordii
ENSCJAG00000023356	-	80	79.832	ENSETEG00000004969	-	100	79.832	Echinops_telfairi
ENSCJAG00000023356	-	100	85.135	ENSETEG00000014252	-	100	85.135	Echinops_telfairi
ENSCJAG00000023356	-	100	82.432	ENSEASG00005018616	MRPL27	100	82.432	Equus_asinus_asinus
ENSCJAG00000023356	-	100	82.432	ENSECAG00000016779	MRPL27	100	82.432	Equus_caballus
ENSCJAG00000023356	-	72	74.528	ENSEEUG00000010178	-	100	74.528	Erinaceus_europaeus
ENSCJAG00000023356	-	89	72.727	ENSEEUG00000011738	-	100	72.727	Erinaceus_europaeus
ENSCJAG00000023356	-	100	82.432	ENSEEUG00000010549	-	100	82.432	Erinaceus_europaeus
ENSCJAG00000023356	-	90	62.687	ENSELUG00000023147	mrpl27	99	62.687	Esox_lucius
ENSCJAG00000023356	-	100	83.108	ENSFCAG00000037928	MRPL27	100	83.108	Felis_catus
ENSCJAG00000023356	-	89	65.152	ENSFALG00000001307	MRPL27	89	65.152	Ficedula_albicollis
ENSCJAG00000023356	-	100	82.432	ENSFDAG00000018359	MRPL27	100	82.432	Fukomys_damarensis
ENSCJAG00000023356	-	98	60.274	ENSFHEG00000007108	mrpl27	99	60.274	Fundulus_heteroclitus
ENSCJAG00000023356	-	100	58.000	ENSGMOG00000000545	mrpl27	100	58.000	Gadus_morhua
ENSCJAG00000023356	-	86	68.750	ENSGALG00000038812	MRPL27	92	68.750	Gallus_gallus
ENSCJAG00000023356	-	98	62.329	ENSGACG00000015241	mrpl27	99	62.329	Gasterosteus_aculeatus
ENSCJAG00000023356	-	57	68.235	ENSGAGG00000014297	MRPL27	92	68.235	Gopherus_agassizii
ENSCJAG00000023356	-	100	91.216	ENSGGOG00000011954	MRPL27	100	93.548	Gorilla_gorilla
ENSCJAG00000023356	-	97	61.806	ENSHBUG00000019735	mrpl27	97	61.806	Haplochromis_burtoni
ENSCJAG00000023356	-	100	83.784	ENSHGLG00000016030	MRPL27	100	83.784	Heterocephalus_glaber_female
ENSCJAG00000023356	-	100	83.784	ENSHGLG00100019037	MRPL27	100	83.784	Heterocephalus_glaber_male
ENSCJAG00000023356	-	100	56.376	ENSHCOG00000002137	mrpl27	99	59.124	Hippocampus_comes
ENSCJAG00000023356	-	99	58.219	ENSIPUG00000003799	mrpl27	99	58.219	Ictalurus_punctatus
ENSCJAG00000023356	-	100	81.757	ENSSTOG00000008896	MRPL27	100	81.757	Ictidomys_tridecemlineatus
ENSCJAG00000023356	-	100	83.108	ENSJJAG00000006271	Mrpl27	100	83.108	Jaculus_jaculus
ENSCJAG00000023356	-	99	62.162	ENSKMAG00000002075	mrpl27	99	62.162	Kryptolebias_marmoratus
ENSCJAG00000023356	-	99	61.486	ENSLBEG00000027521	mrpl27	99	61.486	Labrus_bergylta
ENSCJAG00000023356	-	97	61.806	ENSLACG00000015193	MRPL27	95	61.806	Latimeria_chalumnae
ENSCJAG00000023356	-	99	59.184	ENSLOCG00000011095	mrpl27	99	59.184	Lepisosteus_oculatus
ENSCJAG00000023356	-	93	88.321	ENSLAFG00000018289	MRPL27	100	86.486	Loxodonta_africana
ENSCJAG00000023356	-	100	85.811	ENSMFAG00000008788	-	100	85.811	Macaca_fascicularis
ENSCJAG00000023356	-	100	89.865	ENSMFAG00000031691	MRPL27	100	89.865	Macaca_fascicularis
ENSCJAG00000023356	-	100	85.811	ENSMMUG00000030700	-	100	85.811	Macaca_mulatta
ENSCJAG00000023356	-	96	88.811	ENSMMUG00000017231	-	88	88.811	Macaca_mulatta
ENSCJAG00000023356	-	100	90.541	ENSMNEG00000020495	MRPL27	100	93.548	Macaca_nemestrina
ENSCJAG00000023356	-	100	90.541	ENSMLEG00000038438	MRPL27	100	93.548	Mandrillus_leucophaeus
ENSCJAG00000023356	-	99	62.162	ENSMAMG00000020279	mrpl27	99	62.162	Mastacembelus_armatus
ENSCJAG00000023356	-	97	61.806	ENSMZEG00005003425	mrpl27	97	61.806	Maylandia_zebra
ENSCJAG00000023356	-	86	67.969	ENSMGAG00000009149	MRPL27	88	67.969	Meleagris_gallopavo
ENSCJAG00000023356	-	100	83.784	ENSMAUG00000015242	Mrpl27	100	86.567	Mesocricetus_auratus
ENSCJAG00000023356	-	100	89.865	ENSMICG00000009698	MRPL27	100	89.865	Microcebus_murinus
ENSCJAG00000023356	-	85	77.778	ENSMOCG00000013020	-	98	77.778	Microtus_ochrogaster
ENSCJAG00000023356	-	100	83.108	ENSMOCG00000013199	-	100	83.108	Microtus_ochrogaster
ENSCJAG00000023356	-	87	50.769	ENSMMOG00000000774	mrpl27	87	50.769	Mola_mola
ENSCJAG00000023356	-	100	74.324	ENSMODG00000020899	MRPL27	92	74.324	Monodelphis_domestica
ENSCJAG00000023356	-	98	56.849	ENSMALG00000015780	mrpl27	99	56.849	Monopterus_albus
ENSCJAG00000023356	-	100	83.108	MGP_CAROLIEiJ_G0016989	Mrpl27	100	83.108	Mus_caroli
ENSCJAG00000023356	-	100	83.108	ENSMUSG00000024414	Mrpl27	100	83.108	Mus_musculus
ENSCJAG00000023356	-	91	84.444	MGP_PahariEiJ_G0018120	Mrpl27	99	82.313	Mus_pahari
ENSCJAG00000023356	-	91	84.444	MGP_SPRETEiJ_G0017835	Mrpl27	99	82.313	Mus_spretus
ENSCJAG00000023356	-	100	83.108	ENSMPUG00000015445	MRPL27	100	83.108	Mustela_putorius_furo
ENSCJAG00000023356	-	100	84.459	ENSMLUG00000005539	MRPL27	100	84.459	Myotis_lucifugus
ENSCJAG00000023356	-	91	85.926	ENSNGAG00000011345	Mrpl27	100	84.459	Nannospalax_galili
ENSCJAG00000023356	-	97	61.111	ENSNBRG00000011848	mrpl27	95	63.433	Neolamprologus_brichardi
ENSCJAG00000023356	-	100	89.189	ENSNLEG00000009044	MRPL27	100	92.473	Nomascus_leucogenys
ENSCJAG00000023356	-	89	78.626	ENSMEUG00000004697	MRPL27	98	78.626	Notamacropus_eugenii
ENSCJAG00000023356	-	99	78.912	ENSOPRG00000013236	MRPL27	93	78.912	Ochotona_princeps
ENSCJAG00000023356	-	100	81.081	ENSODEG00000016720	MRPL27	100	81.081	Octodon_degus
ENSCJAG00000023356	-	98	60.959	ENSONIG00000019508	mrpl27	99	60.959	Oreochromis_niloticus
ENSCJAG00000023356	-	82	74.380	ENSOANG00000030806	MRPL27	80	73.282	Ornithorhynchus_anatinus
ENSCJAG00000023356	-	100	85.135	ENSOCUG00000004601	MRPL27	100	85.135	Oryctolagus_cuniculus
ENSCJAG00000023356	-	97	55.944	ENSORLG00000014738	mrpl27	97	55.944	Oryzias_latipes
ENSCJAG00000023356	-	98	55.862	ENSORLG00020015667	mrpl27	98	55.862	Oryzias_latipes_hni
ENSCJAG00000023356	-	98	55.172	ENSORLG00015013520	mrpl27	98	55.172	Oryzias_latipes_hsok
ENSCJAG00000023356	-	89	62.406	ENSOMEG00000018425	mrpl27	81	62.406	Oryzias_melastigma
ENSCJAG00000023356	-	97	75.524	ENSOGAG00000033367	-	97	75.524	Otolemur_garnettii
ENSCJAG00000023356	-	91	86.667	ENSOGAG00000005385	-	92	86.667	Otolemur_garnettii
ENSCJAG00000023356	-	100	81.757	ENSOGAG00000029263	-	100	81.757	Otolemur_garnettii
ENSCJAG00000023356	-	100	83.108	ENSOARG00000004651	MRPL27	100	83.108	Ovis_aries
ENSCJAG00000023356	-	100	90.541	ENSPPAG00000037578	MRPL27	100	90.541	Pan_paniscus
ENSCJAG00000023356	-	100	82.432	ENSPPRG00000009444	MRPL27	100	88.172	Panthera_pardus
ENSCJAG00000023356	-	63	88.172	ENSPTIG00000019684	MRPL27	100	88.172	Panthera_tigris_altaica
ENSCJAG00000023356	-	100	90.541	ENSPTRG00000009396	MRPL27	100	90.541	Pan_troglodytes
ENSCJAG00000023356	-	100	91.216	ENSPANG00000019883	-	100	91.216	Papio_anubis
ENSCJAG00000023356	-	100	90.541	ENSPANG00000022492	-	100	90.541	Papio_anubis
ENSCJAG00000023356	-	100	61.074	ENSPKIG00000009252	MRPL27	100	61.074	Paramormyrops_kingsleyae
ENSCJAG00000023356	-	100	61.074	ENSPKIG00000011006	mrpl27	100	61.074	Paramormyrops_kingsleyae
ENSCJAG00000023356	-	92	66.423	ENSPSIG00000006901	MRPL27	91	66.423	Pelodiscus_sinensis
ENSCJAG00000023356	-	82	63.934	ENSPMGG00000019079	mrpl27	99	60.274	Periophthalmus_magnuspinnatus
ENSCJAG00000023356	-	100	83.784	ENSPEMG00000020655	Mrpl27	100	83.784	Peromyscus_maniculatus_bairdii
ENSCJAG00000023356	-	99	56.849	ENSPFOG00000006380	mrpl27	96	56.849	Poecilia_formosa
ENSCJAG00000023356	-	99	56.849	ENSPFOG00000019153	-	96	56.849	Poecilia_formosa
ENSCJAG00000023356	-	99	57.534	ENSPLAG00000019989	mrpl27	96	57.534	Poecilia_latipinna
ENSCJAG00000023356	-	99	57.534	ENSPMEG00000002546	-	96	57.534	Poecilia_mexicana
ENSCJAG00000023356	-	99	57.534	ENSPMEG00000017133	mrpl27	96	57.534	Poecilia_mexicana
ENSCJAG00000023356	-	99	58.219	ENSPREG00000017321	mrpl27	96	58.219	Poecilia_reticulata
ENSCJAG00000023356	-	100	89.865	ENSPPYG00000008286	MRPL27	98	89.865	Pongo_abelii
ENSCJAG00000023356	-	91	83.582	ENSPCAG00000002469	MRPL27	100	83.582	Procavia_capensis
ENSCJAG00000023356	-	100	88.514	ENSPCOG00000014496	MRPL27	100	88.514	Propithecus_coquereli
ENSCJAG00000023356	-	91	82.963	ENSPVAG00000016582	MRPL27	94	79.054	Pteropus_vampyrus
ENSCJAG00000023356	-	97	61.806	ENSPNYG00000008975	mrpl27	97	61.806	Pundamilia_nyererei
ENSCJAG00000023356	-	86	63.281	ENSPNAG00000010722	mrpl27	86	63.281	Pygocentrus_nattereri
ENSCJAG00000023356	-	100	81.757	ENSRNOG00000003724	Mrpl27	100	81.757	Rattus_norvegicus
ENSCJAG00000023356	-	100	88.514	ENSRBIG00000033398	MRPL27	100	88.514	Rhinopithecus_bieti
ENSCJAG00000023356	-	100	88.514	ENSRROG00000030847	MRPL27	100	88.514	Rhinopithecus_roxellana
ENSCJAG00000023356	-	63	87.368	ENSSBOG00000033685	-	90	87.368	Saimiri_boliviensis_boliviensis
ENSCJAG00000023356	-	100	91.216	ENSSBOG00000016577	-	100	91.216	Saimiri_boliviensis_boliviensis
ENSCJAG00000023356	-	93	76.812	ENSSHAG00000004216	MRPL27	88	76.812	Sarcophilus_harrisii
ENSCJAG00000023356	-	100	60.135	ENSSFOG00015000879	mrpl27	100	60.135	Scleropages_formosus
ENSCJAG00000023356	-	98	59.589	ENSSMAG00000001706	mrpl27	99	61.765	Scophthalmus_maximus
ENSCJAG00000023356	-	89	58.647	ENSSDUG00000013202	mrpl27	96	60.000	Seriola_dumerili
ENSCJAG00000023356	-	89	58.647	ENSSLDG00000011922	mrpl27	96	60.000	Seriola_lalandi_dorsalis
ENSCJAG00000023356	-	91	58.209	ENSSARG00000000254	MRPL27	100	58.209	Sorex_araneus
ENSCJAG00000023356	-	89	61.594	ENSSPUG00000010135	MRPL27	91	61.594	Sphenodon_punctatus
ENSCJAG00000023356	-	98	60.274	ENSSPAG00000020495	mrpl27	99	60.274	Stegastes_partitus
ENSCJAG00000023356	-	100	84.459	ENSSSCG00000023783	MRPL27	100	84.459	Sus_scrofa
ENSCJAG00000023356	-	86	68.992	ENSTGUG00000008925	MRPL27	98	68.992	Taeniopygia_guttata
ENSCJAG00000023356	-	80	62.185	ENSTRUG00000024146	mrpl27	81	62.185	Takifugu_rubripes
ENSCJAG00000023356	-	82	65.323	ENSTNIG00000019792	mrpl27	99	65.323	Tetraodon_nigroviridis
ENSCJAG00000023356	-	100	87.838	ENSTBEG00000015816	MRPL27	100	87.838	Tupaia_belangeri
ENSCJAG00000023356	-	96	83.099	ENSTTRG00000000202	MRPL27	91	83.099	Tursiops_truncatus
ENSCJAG00000023356	-	100	81.081	ENSUAMG00000011300	MRPL27	100	81.081	Ursus_americanus
ENSCJAG00000023356	-	91	82.222	ENSUMAG00000014818	MRPL27	62	82.222	Ursus_maritimus
ENSCJAG00000023356	-	63	84.946	ENSVVUG00000000165	-	100	84.946	Vulpes_vulpes
ENSCJAG00000023356	-	89	60.606	ENSXETG00000027422	mrpl27	100	60.606	Xenopus_tropicalis
ENSCJAG00000023356	-	82	68.033	ENSXCOG00000003196	mrpl27	70	68.033	Xiphophorus_couchianus
ENSCJAG00000023356	-	99	59.589	ENSXMAG00000024261	mrpl27	96	59.589	Xiphophorus_maculatus