EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000031662 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 3760 bases
Position: chrNTIC01036611.1:30234286-30238045
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000046978	G-patch	PF01585.23	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000052223	-	435	-	ENSCJAP00000046978	144 (aa)	-	F7I161

Gene Model

Click here to download ENSCJAG00000031662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000031662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000031662	-	81	94.828	ENSCJAG00000006048	GPATCH4	92	94.643
ENSCJAG00000031662	-	82	84.746	ENSCJAG00000001883	-	96	84.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000031662	-	84	95.041	ENSG00000160818	GPATCH4	98	93.162	Homo_sapiens
ENSCJAG00000031662	-	69	46.078	ENSACIG00000017309	-	69	52.381	Amphilophus_citrinellus
ENSCJAG00000031662	-	79	45.902	ENSACLG00000010456	gpatch4	54	52.174	Astatotilapia_calliptera
ENSCJAG00000031662	-	79	45.902	ENSAMXG00000034049	gpatch4	73	41.844	Astyanax_mexicanus
ENSCJAG00000031662	-	83	78.992	ENSCAFG00020006707	-	97	78.992	Canis_lupus_dingo
ENSCJAG00000031662	-	78	82.143	ENSCAFG00020005274	-	88	82.143	Canis_lupus_dingo
ENSCJAG00000031662	-	77	89.189	ENSTSYG00000026904	-	78	89.189	Carlito_syrichta
ENSCJAG00000031662	-	81	82.051	ENSCPOG00000013701	-	98	82.051	Cavia_porcellus
ENSCJAG00000031662	-	82	93.220	ENSCCAG00000036114	GPATCH4	92	94.643	Cebus_capucinus
ENSCJAG00000031662	-	84	93.388	ENSCATG00000042152	GPATCH4	100	79.021	Cercocebus_atys
ENSCJAG00000031662	-	84	92.562	ENSCANG00000030031	GPATCH4	100	79.021	Colobus_angolensis_palliatus
ENSCJAG00000031662	-	84	45.736	ENSDARG00000091931	gpatch4	67	45.736	Danio_rerio
ENSCJAG00000031662	-	78	85.714	ENSDORG00000011332	-	76	85.714	Dipodomys_ordii
ENSCJAG00000031662	-	97	79.720	ENSGGOG00000000753	GPATCH4	100	79.720	Gorilla_gorilla
ENSCJAG00000031662	-	79	45.902	ENSHBUG00000009675	gpatch4	53	52.174	Haplochromis_burtoni
ENSCJAG00000031662	-	97	74.648	ENSHGLG00000011346	-	90	88.496	Heterocephalus_glaber_female
ENSCJAG00000031662	-	97	74.648	ENSHGLG00100018277	-	97	74.648	Heterocephalus_glaber_male
ENSCJAG00000031662	-	84	88.430	ENSSTOG00000020510	GPATCH4	95	81.600	Ictidomys_tridecemlineatus
ENSCJAG00000031662	-	97	79.720	ENSMFAG00000030965	GPATCH4	100	79.720	Macaca_fascicularis
ENSCJAG00000031662	-	84	94.215	ENSMMUG00000002624	GPATCH4	100	80.420	Macaca_mulatta
ENSCJAG00000031662	-	97	79.720	ENSMNEG00000028844	GPATCH4	100	79.720	Macaca_nemestrina
ENSCJAG00000031662	-	97	78.767	ENSMLEG00000037909	GPATCH4	100	78.767	Mandrillus_leucophaeus
ENSCJAG00000031662	-	78	83.036	ENSMAUG00000008406	-	93	83.036	Mesocricetus_auratus
ENSCJAG00000031662	-	84	74.380	ENSMICG00000038615	-	87	70.940	Microcebus_murinus
ENSCJAG00000031662	-	84	80.992	ENSMICG00000034025	-	96	80.702	Microcebus_murinus
ENSCJAG00000031662	-	68	86.735	ENSMICG00000047155	-	88	86.735	Microcebus_murinus
ENSCJAG00000031662	-	78	81.250	ENSMOCG00000008875	-	98	81.250	Microtus_ochrogaster
ENSCJAG00000031662	-	79	48.780	ENSMMOG00000017095	gpatch4	96	47.664	Mola_mola
ENSCJAG00000031662	-	84	61.290	ENSMODG00000014154	-	61	61.290	Monodelphis_domestica
ENSCJAG00000031662	-	98	55.556	ENSMODG00000016818	-	51	55.556	Monodelphis_domestica
ENSCJAG00000031662	-	84	82.645	MGP_CAROLIEiJ_G0025152	Gpatch4	51	82.645	Mus_caroli
ENSCJAG00000031662	-	84	81.818	ENSMUSG00000028069	Gpatch4	51	81.818	Mus_musculus
ENSCJAG00000031662	-	84	81.818	MGP_PahariEiJ_G0026595	-	51	81.818	Mus_pahari
ENSCJAG00000031662	-	84	81.818	MGP_SPRETEiJ_G0026093	Gpatch4	51	81.818	Mus_spretus
ENSCJAG00000031662	-	78	83.929	ENSNGAG00000019958	-	85	83.929	Nannospalax_galili
ENSCJAG00000031662	-	77	81.081	ENSODEG00000005222	-	97	81.081	Octodon_degus
ENSCJAG00000031662	-	58	86.905	ENSODEG00000016849	-	76	86.905	Octodon_degus
ENSCJAG00000031662	-	81	86.325	ENSODEG00000010437	-	98	86.325	Octodon_degus
ENSCJAG00000031662	-	71	43.689	ENSORLG00000016102	-	94	43.689	Oryzias_latipes
ENSCJAG00000031662	-	97	79.720	ENSPPAG00000028364	-	100	79.720	Pan_paniscus
ENSCJAG00000031662	-	84	88.430	ENSPTIG00000006717	GPATCH4	100	73.571	Panthera_tigris_altaica
ENSCJAG00000031662	-	97	79.720	ENSPTRG00000001464	GPATCH4	100	79.720	Pan_troglodytes
ENSCJAG00000031662	-	97	79.720	ENSPANG00000018543	GPATCH4	100	79.720	Papio_anubis
ENSCJAG00000031662	-	76	43.220	ENSPMGG00000019375	-	83	43.220	Periophthalmus_magnuspinnatus
ENSCJAG00000031662	-	84	81.818	ENSPCOG00000013948	-	85	81.818	Propithecus_coquereli
ENSCJAG00000031662	-	84	90.909	ENSPCOG00000023130	-	100	72.483	Propithecus_coquereli
ENSCJAG00000031662	-	84	94.215	ENSRBIG00000005742	GPATCH4	100	79.720	Rhinopithecus_bieti
ENSCJAG00000031662	-	84	94.215	ENSRROG00000044157	GPATCH4	100	79.720	Rhinopithecus_roxellana
ENSCJAG00000031662	-	79	46.774	ENSTRUG00000020638	-	88	46.774	Takifugu_rubripes
ENSCJAG00000031662	-	83	78.151	ENSVVUG00000006004	-	88	78.151	Vulpes_vulpes
ENSCJAG00000031662	-	83	74.790	ENSVVUG00000019904	-	97	74.790	Vulpes_vulpes