EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000035686 (Gene tree)
Gene ID: 100393438
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 27710 bases
Position: chrNTIC01036611.1:16299672-16327381
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000049862	RRM_1	PF00076.22	3.6e-18	1	2
ENSCJAP00000049862	RRM_1	PF00076.22	3.6e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000057999	RNPC3-201	1695	-	ENSCJAP00000049862	500 (aa)	-	F6YUS6

Gene Model

Click here to download ENSCJAG00000035686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000035686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000035686	RNPC3	100	94.391	ENSG00000185946	RNPC3	100	100.000	Homo_sapiens
ENSCJAG00000035686	RNPC3	95	56.048	ENSAPOG00000017371	rnpc3	97	56.048	Acanthochromis_polyacanthus
ENSCJAG00000035686	RNPC3	98	89.194	ENSAMEG00000001694	RNPC3	100	87.885	Ailuropoda_melanoleuca
ENSCJAG00000035686	RNPC3	95	52.400	ENSACIG00000021043	rnpc3	97	52.200	Amphilophus_citrinellus
ENSCJAG00000035686	RNPC3	95	55.711	ENSAOCG00000014052	rnpc3	95	55.711	Amphiprion_ocellaris
ENSCJAG00000035686	RNPC3	95	55.511	ENSAPEG00000008739	rnpc3	95	55.511	Amphiprion_percula
ENSCJAG00000035686	RNPC3	95	54.582	ENSATEG00000021263	rnpc3	97	54.582	Anabas_testudineus
ENSCJAG00000035686	RNPC3	87	66.740	ENSAPLG00000015605	RNPC3	99	67.401	Anas_platyrhynchos
ENSCJAG00000035686	RNPC3	95	67.755	ENSACAG00000002029	RNPC3	96	68.008	Anolis_carolinensis
ENSCJAG00000035686	RNPC3	100	94.971	ENSANAG00000019950	RNPC3	100	94.971	Aotus_nancymaae
ENSCJAG00000035686	RNPC3	94	54.656	ENSACLG00000014702	rnpc3	96	54.656	Astatotilapia_calliptera
ENSCJAG00000035686	RNPC3	94	56.735	ENSAMXG00000033372	rnpc3	96	55.306	Astyanax_mexicanus
ENSCJAG00000035686	RNPC3	100	88.588	ENSBTAG00000019091	RNPC3	100	88.201	Bos_taurus
ENSCJAG00000035686	RNPC3	100	88.224	ENSCAFG00000019972	RNPC3	100	87.838	Canis_familiaris
ENSCJAG00000035686	RNPC3	100	88.417	ENSCAFG00020011300	RNPC3	100	88.031	Canis_lupus_dingo
ENSCJAG00000035686	RNPC3	100	85.880	ENSCHIG00000020361	RNPC3	100	88.201	Capra_hircus
ENSCJAG00000035686	RNPC3	100	83.238	ENSTSYG00000030256	RNPC3	100	86.460	Carlito_syrichta
ENSCJAG00000035686	RNPC3	84	81.948	ENSCAPG00000013600	RNPC3	97	82.567	Cavia_aperea
ENSCJAG00000035686	RNPC3	100	86.267	ENSCPOG00000031638	RNPC3	100	87.041	Cavia_porcellus
ENSCJAG00000035686	RNPC3	100	94.971	ENSCCAG00000024301	RNPC3	100	94.971	Cebus_capucinus
ENSCJAG00000035686	RNPC3	99	69.804	ENSCATG00000035930	-	99	70.101	Cercocebus_atys
ENSCJAG00000035686	RNPC3	99	93.010	ENSCATG00000002086	RNPC3	99	92.621	Cercocebus_atys
ENSCJAG00000035686	RNPC3	100	84.302	ENSCLAG00000005169	RNPC3	100	84.302	Chinchilla_lanigera
ENSCJAG00000035686	RNPC3	99	92.816	ENSCSAG00000001519	RNPC3	99	92.427	Chlorocebus_sabaeus
ENSCJAG00000035686	RNPC3	95	69.416	ENSCPBG00000028311	RNPC3	95	69.416	Chrysemys_picta_bellii
ENSCJAG00000035686	RNPC3	93	39.186	ENSCSAVG00000002800	-	72	60.833	Ciona_savignyi
ENSCJAG00000035686	RNPC3	99	92.816	ENSCANG00000031444	RNPC3	99	92.427	Colobus_angolensis_palliatus
ENSCJAG00000035686	RNPC3	99	85.853	ENSCGRG00001019276	Rnpc3	100	85.465	Cricetulus_griseus_chok1gshd
ENSCJAG00000035686	RNPC3	87	86.062	ENSCGRG00000000053	Rnpc3	100	85.619	Cricetulus_griseus_crigri
ENSCJAG00000035686	RNPC3	94	54.082	ENSCSEG00000013475	rnpc3	95	54.132	Cynoglossus_semilaevis
ENSCJAG00000035686	RNPC3	94	54.076	ENSCVAG00000002645	rnpc3	96	54.274	Cyprinodon_variegatus
ENSCJAG00000035686	RNPC3	95	56.972	ENSDARG00000011247	rnpc3	94	65.517	Danio_rerio
ENSCJAG00000035686	RNPC3	100	86.847	ENSDNOG00000047498	-	100	86.460	Dasypus_novemcinctus
ENSCJAG00000035686	RNPC3	100	86.847	ENSDNOG00000044555	-	100	86.460	Dasypus_novemcinctus
ENSCJAG00000035686	RNPC3	99	86.047	ENSDORG00000027343	Rnpc3	99	85.659	Dipodomys_ordii
ENSCJAG00000035686	RNPC3	94	47.758	ENSEBUG00000002068	rnpc3	97	47.554	Eptatretus_burgeri
ENSCJAG00000035686	RNPC3	100	88.224	ENSEASG00005015957	RNPC3	100	87.838	Equus_asinus_asinus
ENSCJAG00000035686	RNPC3	100	88.224	ENSECAG00000021148	RNPC3	100	87.838	Equus_caballus
ENSCJAG00000035686	RNPC3	95	53.696	ENSELUG00000002264	rnpc3	97	53.502	Esox_lucius
ENSCJAG00000035686	RNPC3	100	88.417	ENSFCAG00000024312	RNPC3	100	88.031	Felis_catus
ENSCJAG00000035686	RNPC3	87	68.943	ENSFALG00000002580	RNPC3	99	72.249	Ficedula_albicollis
ENSCJAG00000035686	RNPC3	99	86.240	ENSFDAG00000019948	RNPC3	100	85.853	Fukomys_damarensis
ENSCJAG00000035686	RNPC3	95	51.116	ENSFHEG00000020647	rnpc3	98	51.116	Fundulus_heteroclitus
ENSCJAG00000035686	RNPC3	94	55.350	ENSGMOG00000019213	rnpc3	96	54.115	Gadus_morhua
ENSCJAG00000035686	RNPC3	95	69.293	ENSGALG00000005162	RNPC3	89	68.889	Gallus_gallus
ENSCJAG00000035686	RNPC3	94	51.984	ENSGAFG00000017236	rnpc3	96	52.600	Gambusia_affinis
ENSCJAG00000035686	RNPC3	94	55.306	ENSGACG00000002048	rnpc3	96	54.800	Gasterosteus_aculeatus
ENSCJAG00000035686	RNPC3	95	69.014	ENSGAGG00000008438	RNPC3	98	67.578	Gopherus_agassizii
ENSCJAG00000035686	RNPC3	99	73.386	ENSGGOG00000026201	-	99	73.190	Gorilla_gorilla
ENSCJAG00000035686	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSCJAG00000035686	RNPC3	100	87.041	ENSHGLG00000001708	RNPC3	100	86.654	Heterocephalus_glaber_female
ENSCJAG00000035686	RNPC3	100	87.041	ENSHGLG00100003005	RNPC3	100	86.654	Heterocephalus_glaber_male
ENSCJAG00000035686	RNPC3	95	55.289	ENSHCOG00000017135	rnpc3	97	55.090	Hippocampus_comes
ENSCJAG00000035686	RNPC3	93	56.674	ENSIPUG00000002916	rnpc3	95	56.263	Ictalurus_punctatus
ENSCJAG00000035686	RNPC3	100	87.814	ENSSTOG00000025020	RNPC3	100	87.621	Ictidomys_tridecemlineatus
ENSCJAG00000035686	RNPC3	99	83.527	ENSJJAG00000010203	Rnpc3	100	84.109	Jaculus_jaculus
ENSCJAG00000035686	RNPC3	94	56.442	ENSKMAG00000017358	rnpc3	98	56.301	Kryptolebias_marmoratus
ENSCJAG00000035686	RNPC3	95	55.200	ENSLBEG00000024901	rnpc3	95	55.511	Labrus_bergylta
ENSCJAG00000035686	RNPC3	93	62.963	ENSLACG00000005720	RNPC3	89	63.299	Latimeria_chalumnae
ENSCJAG00000035686	RNPC3	94	59.631	ENSLOCG00000007986	rnpc3	96	59.631	Lepisosteus_oculatus
ENSCJAG00000035686	RNPC3	99	85.078	ENSLAFG00000032342	RNPC3	100	84.690	Loxodonta_africana
ENSCJAG00000035686	RNPC3	99	92.816	ENSMFAG00000002004	RNPC3	99	92.427	Macaca_fascicularis
ENSCJAG00000035686	RNPC3	99	68.687	ENSMFAG00000002917	-	98	67.879	Macaca_fascicularis
ENSCJAG00000035686	RNPC3	85	87.442	ENSMMUG00000002098	-	88	87.442	Macaca_mulatta
ENSCJAG00000035686	RNPC3	99	92.816	ENSMMUG00000018039	RNPC3	99	92.427	Macaca_mulatta
ENSCJAG00000035686	RNPC3	99	87.961	ENSMNEG00000033950	RNPC3	99	87.573	Macaca_nemestrina
ENSCJAG00000035686	RNPC3	99	65.121	ENSMNEG00000029209	-	99	65.323	Macaca_nemestrina
ENSCJAG00000035686	RNPC3	99	93.010	ENSMLEG00000033628	RNPC3	99	92.621	Mandrillus_leucophaeus
ENSCJAG00000035686	RNPC3	98	69.800	ENSMLEG00000034644	-	98	69.400	Mandrillus_leucophaeus
ENSCJAG00000035686	RNPC3	95	51.411	ENSMAMG00000007496	rnpc3	96	51.633	Mastacembelus_armatus
ENSCJAG00000035686	RNPC3	94	53.360	ENSMZEG00005020233	rnpc3	97	53.360	Maylandia_zebra
ENSCJAG00000035686	RNPC3	87	67.692	ENSMGAG00000006381	RNPC3	99	67.912	Meleagris_gallopavo
ENSCJAG00000035686	RNPC3	96	87.174	ENSMAUG00000001358	Rnpc3	100	85.659	Mesocricetus_auratus
ENSCJAG00000035686	RNPC3	99	85.878	ENSMICG00000029591	RNPC3	99	89.147	Microcebus_murinus
ENSCJAG00000035686	RNPC3	97	86.800	ENSMOCG00000013423	Rnpc3	100	84.942	Microtus_ochrogaster
ENSCJAG00000035686	RNPC3	95	52.588	ENSMMOG00000005309	rnpc3	97	53.002	Mola_mola
ENSCJAG00000035686	RNPC3	99	76.550	ENSMODG00000002946	RNPC3	99	75.969	Monodelphis_domestica
ENSCJAG00000035686	RNPC3	94	52.305	ENSMALG00000015471	rnpc3	97	51.503	Monopterus_albus
ENSCJAG00000035686	RNPC3	99	83.527	MGP_CAROLIEiJ_G0025555	Rnpc3	100	83.140	Mus_caroli
ENSCJAG00000035686	RNPC3	99	84.109	ENSMUSG00000027981	Rnpc3	100	83.721	Mus_musculus
ENSCJAG00000035686	RNPC3	99	83.527	MGP_PahariEiJ_G0027001	Rnpc3	100	83.140	Mus_pahari
ENSCJAG00000035686	RNPC3	99	83.915	MGP_SPRETEiJ_G0026505	Rnpc3	100	83.527	Mus_spretus
ENSCJAG00000035686	RNPC3	100	87.861	ENSMPUG00000007349	RNPC3	100	87.476	Mustela_putorius_furo
ENSCJAG00000035686	RNPC3	100	85.300	ENSMLUG00000028743	RNPC3	100	84.913	Myotis_lucifugus
ENSCJAG00000035686	RNPC3	99	85.214	ENSNGAG00000010939	Rnpc3	100	84.884	Nannospalax_galili
ENSCJAG00000035686	RNPC3	94	54.453	ENSNBRG00000012196	rnpc3	93	54.379	Neolamprologus_brichardi
ENSCJAG00000035686	RNPC3	100	92.843	ENSNLEG00000012013	RNPC3	100	92.456	Nomascus_leucogenys
ENSCJAG00000035686	RNPC3	100	84.526	ENSODEG00000007612	RNPC3	100	84.913	Octodon_degus
ENSCJAG00000035686	RNPC3	94	54.858	ENSONIG00000004770	rnpc3	99	54.582	Oreochromis_niloticus
ENSCJAG00000035686	RNPC3	90	74.893	ENSOANG00000008220	RNPC3	99	74.893	Ornithorhynchus_anatinus
ENSCJAG00000035686	RNPC3	100	88.008	ENSOCUG00000004016	RNPC3	100	87.427	Oryctolagus_cuniculus
ENSCJAG00000035686	RNPC3	95	54.858	ENSORLG00000005694	rnpc3	97	53.441	Oryzias_latipes
ENSCJAG00000035686	RNPC3	95	55.668	ENSORLG00020005513	rnpc3	97	54.251	Oryzias_latipes_hni
ENSCJAG00000035686	RNPC3	95	55.061	ENSORLG00015002179	rnpc3	97	53.644	Oryzias_latipes_hsok
ENSCJAG00000035686	RNPC3	95	54.361	ENSOMEG00000017737	rnpc3	97	54.158	Oryzias_melastigma
ENSCJAG00000035686	RNPC3	100	86.667	ENSOGAG00000026182	RNPC3	100	88.781	Otolemur_garnettii
ENSCJAG00000035686	RNPC3	100	85.687	ENSOARG00000018719	RNPC3	100	88.008	Ovis_aries
ENSCJAG00000035686	RNPC3	100	75.242	ENSPPAG00000030278	-	100	76.015	Pan_paniscus
ENSCJAG00000035686	RNPC3	100	94.015	ENSPPAG00000037459	RNPC3	100	94.015	Pan_paniscus
ENSCJAG00000035686	RNPC3	100	88.417	ENSPPRG00000020246	RNPC3	100	88.031	Panthera_pardus
ENSCJAG00000035686	RNPC3	98	88.583	ENSPTIG00000009887	RNPC3	100	88.189	Panthera_tigris_altaica
ENSCJAG00000035686	RNPC3	100	74.468	ENSPTRG00000044227	-	100	74.275	Pan_troglodytes
ENSCJAG00000035686	RNPC3	100	94.197	ENSPTRG00000033902	RNPC3	100	94.197	Pan_troglodytes
ENSCJAG00000035686	RNPC3	99	92.816	ENSPANG00000012137	RNPC3	99	92.427	Papio_anubis
ENSCJAG00000035686	RNPC3	98	72.888	ENSPANG00000029957	-	100	72.672	Papio_anubis
ENSCJAG00000035686	RNPC3	94	52.515	ENSPKIG00000008828	rnpc3	95	52.642	Paramormyrops_kingsleyae
ENSCJAG00000035686	RNPC3	62	64.759	ENSPSIG00000007396	RNPC3	99	65.361	Pelodiscus_sinensis
ENSCJAG00000035686	RNPC3	93	51.967	ENSPMGG00000011742	rnpc3	95	52.697	Periophthalmus_magnuspinnatus
ENSCJAG00000035686	RNPC3	88	85.120	ENSPEMG00000020112	Rnpc3	100	85.398	Peromyscus_maniculatus_bairdii
ENSCJAG00000035686	RNPC3	95	43.353	ENSPMAG00000003778	rnpc3	51	47.080	Petromyzon_marinus
ENSCJAG00000035686	RNPC3	99	76.357	ENSPCIG00000004415	-	99	76.163	Phascolarctos_cinereus
ENSCJAG00000035686	RNPC3	95	52.121	ENSPFOG00000009895	rnpc3	97	52.209	Poecilia_formosa
ENSCJAG00000035686	RNPC3	95	52.008	ENSPLAG00000012023	rnpc3	97	52.209	Poecilia_latipinna
ENSCJAG00000035686	RNPC3	95	52.716	ENSPMEG00000003663	rnpc3	97	52.410	Poecilia_mexicana
ENSCJAG00000035686	RNPC3	96	51.896	ENSPREG00000010206	rnpc3	97	52.305	Poecilia_reticulata
ENSCJAG00000035686	RNPC3	83	90.323	ENSPPYG00000001102	RNPC3	99	90.323	Pongo_abelii
ENSCJAG00000035686	RNPC3	94	54.453	ENSPNYG00000020603	rnpc3	96	54.453	Pundamilia_nyererei
ENSCJAG00000035686	RNPC3	96	53.937	ENSPNAG00000000524	rnpc3	90	51.838	Pygocentrus_nattereri
ENSCJAG00000035686	RNPC3	99	83.527	ENSRNOG00000017310	Rnpc3	100	83.140	Rattus_norvegicus
ENSCJAG00000035686	RNPC3	99	87.791	ENSRBIG00000043897	RNPC3	99	87.403	Rhinopithecus_bieti
ENSCJAG00000035686	RNPC3	99	94.369	ENSRROG00000032334	RNPC3	99	94.369	Rhinopithecus_roxellana
ENSCJAG00000035686	RNPC3	100	92.843	ENSSBOG00000024473	RNPC3	100	92.456	Saimiri_boliviensis_boliviensis
ENSCJAG00000035686	RNPC3	99	76.550	ENSSHAG00000011859	RNPC3	99	75.969	Sarcophilus_harrisii
ENSCJAG00000035686	RNPC3	95	59.026	ENSSFOG00015013055	rnpc3	99	59.109	Scleropages_formosus
ENSCJAG00000035686	RNPC3	95	51.697	ENSSMAG00000020346	rnpc3	97	51.697	Scophthalmus_maximus
ENSCJAG00000035686	RNPC3	94	54.491	ENSSDUG00000006600	rnpc3	96	54.491	Seriola_dumerili
ENSCJAG00000035686	RNPC3	94	54.691	ENSSLDG00000007979	rnpc3	96	54.691	Seriola_lalandi_dorsalis
ENSCJAG00000035686	RNPC3	93	70.928	ENSSPUG00000008539	-	92	71.074	Sphenodon_punctatus
ENSCJAG00000035686	RNPC3	96	64.800	ENSSPUG00000003872	-	92	64.718	Sphenodon_punctatus
ENSCJAG00000035686	RNPC3	95	56.495	ENSSPAG00000005633	rnpc3	97	56.907	Stegastes_partitus
ENSCJAG00000035686	RNPC3	100	89.126	ENSSSCG00000037254	RNPC3	100	88.932	Sus_scrofa
ENSCJAG00000035686	RNPC3	87	68.212	ENSTGUG00000004795	-	99	67.770	Taeniopygia_guttata
ENSCJAG00000035686	RNPC3	95	54.949	ENSTNIG00000018963	rnpc3	97	54.747	Tetraodon_nigroviridis
ENSCJAG00000035686	RNPC3	98	89.370	ENSUMAG00000007775	RNPC3	100	88.976	Ursus_maritimus
ENSCJAG00000035686	RNPC3	100	88.417	ENSVVUG00000000331	RNPC3	100	88.031	Vulpes_vulpes
ENSCJAG00000035686	RNPC3	95	51.904	ENSXETG00000025027	rnpc3	96	51.406	Xenopus_tropicalis
ENSCJAG00000035686	RNPC3	96	50.000	ENSXCOG00000005013	rnpc3	97	52.174	Xiphophorus_couchianus
ENSCJAG00000035686	RNPC3	95	52.087	ENSXMAG00000006495	rnpc3	97	52.590	Xiphophorus_maculatus