EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000038388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 1128 bases
Position: chrNTIC01000001.1:117744345-117745472
Accession: 100388387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064873	KH_1	PF00013.29	1.6e-50	1	3
ENSCJAP00000064873	KH_1	PF00013.29	1.6e-50	2	3
ENSCJAP00000064873	KH_1	PF00013.29	1.6e-50	3	3
ENSCJAP00000064873	KH_2	PF07650.17	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000068518	-	1128	-	ENSCJAP00000064873	375 (aa)	XP_002742821	A0A2R8MTS4

Gene Model

Click here to download ENSCJAG00000038388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000038388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000038388	-	94	38.636	ENSCJAG00000039497	NOVA1	59	38.636
ENSCJAG00000038388	-	97	63.492	ENSCJAG00000005783	PCBP4	79	63.492
ENSCJAG00000038388	-	95	78.747	ENSCJAG00000018590	-	100	78.747
ENSCJAG00000038388	-	74	39.394	ENSCJAG00000020542	FUBP3	77	39.437
ENSCJAG00000038388	-	98	69.919	ENSCJAG00000034075	-	96	69.919
ENSCJAG00000038388	-	50	32.934	ENSCJAG00000014731	IGF2BP2	67	32.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000038388	-	95	94.382	ENSG00000169564	PCBP1	100	94.382	Homo_sapiens
ENSCJAG00000038388	-	95	91.573	ENSAMEG00000016094	PCBP1	100	91.573	Ailuropoda_melanoleuca
ENSCJAG00000038388	-	75	89.046	ENSANAG00000019364	-	100	89.046	Aotus_nancymaae
ENSCJAG00000038388	-	95	80.618	ENSANAG00000033377	-	100	80.618	Aotus_nancymaae
ENSCJAG00000038388	-	92	90.751	ENSANAG00000026989	-	99	90.751	Aotus_nancymaae
ENSCJAG00000038388	-	75	86.219	ENSANAG00000022494	-	100	86.219	Aotus_nancymaae
ENSCJAG00000038388	-	84	82.911	ENSANAG00000027108	-	100	82.911	Aotus_nancymaae
ENSCJAG00000038388	-	75	89.753	ENSANAG00000031745	-	100	89.753	Aotus_nancymaae
ENSCJAG00000038388	-	95	83.146	ENSANAG00000026077	-	100	83.146	Aotus_nancymaae
ENSCJAG00000038388	-	95	84.270	ENSANAG00000023938	-	100	84.270	Aotus_nancymaae
ENSCJAG00000038388	-	86	94.136	ENSBTAG00000008985	PCBP1	99	94.136	Bos_taurus
ENSCJAG00000038388	-	95	94.101	ENSCAFG00000003326	PCBP1	100	94.101	Canis_familiaris
ENSCJAG00000038388	-	95	94.382	ENSCHIG00000007923	PCBP1	100	94.382	Capra_hircus
ENSCJAG00000038388	-	95	93.820	ENSTSYG00000027848	PCBP1	100	93.820	Carlito_syrichta
ENSCJAG00000038388	-	95	94.382	ENSCPOG00000013511	PCBP1	100	94.382	Cavia_porcellus
ENSCJAG00000038388	-	95	94.382	ENSCCAG00000019842	-	100	94.382	Cebus_capucinus
ENSCJAG00000038388	-	95	85.994	ENSCCAG00000029186	-	99	85.994	Cebus_capucinus
ENSCJAG00000038388	-	95	94.382	ENSCATG00000015029	PCBP1	100	94.382	Cercocebus_atys
ENSCJAG00000038388	-	95	94.101	ENSCLAG00000017909	PCBP1	100	94.101	Chinchilla_lanigera
ENSCJAG00000038388	-	95	94.382	ENSCSAG00000019441	PCBP1	100	94.382	Chlorocebus_sabaeus
ENSCJAG00000038388	-	95	94.382	ENSCANG00000018039	-	100	94.382	Colobus_angolensis_palliatus
ENSCJAG00000038388	-	68	80.392	ENSCANG00000033810	-	87	80.392	Colobus_angolensis_palliatus
ENSCJAG00000038388	-	100	85.106	ENSCANG00000032470	-	100	85.106	Colobus_angolensis_palliatus
ENSCJAG00000038388	-	95	94.382	ENSCGRG00001015078	Pcbp1	100	94.382	Cricetulus_griseus_chok1gshd
ENSCJAG00000038388	-	95	94.382	ENSCGRG00000018899	Pcbp1	100	94.382	Cricetulus_griseus_crigri
ENSCJAG00000038388	-	76	93.333	ENSDNOG00000036372	PCBP1	99	93.333	Dasypus_novemcinctus
ENSCJAG00000038388	-	95	94.382	ENSDORG00000008216	Pcbp1	100	94.382	Dipodomys_ordii
ENSCJAG00000038388	-	95	94.382	ENSFCAG00000022238	PCBP1	100	94.382	Felis_catus
ENSCJAG00000038388	-	95	94.101	ENSFDAG00000019637	PCBP1	100	94.101	Fukomys_damarensis
ENSCJAG00000038388	-	95	94.382	ENSGGOG00000028130	PCBP1	100	94.382	Gorilla_gorilla
ENSCJAG00000038388	-	95	94.101	ENSHGLG00000020345	Pcbp1	100	94.101	Heterocephalus_glaber_female
ENSCJAG00000038388	-	95	92.416	ENSHGLG00000020243	-	100	92.416	Heterocephalus_glaber_female
ENSCJAG00000038388	-	95	93.820	ENSHGLG00100019620	-	100	93.820	Heterocephalus_glaber_male
ENSCJAG00000038388	-	95	94.101	ENSHGLG00100019761	Pcbp1	100	94.101	Heterocephalus_glaber_male
ENSCJAG00000038388	-	95	94.382	ENSSTOG00000026002	PCBP1	100	94.382	Ictidomys_tridecemlineatus
ENSCJAG00000038388	-	95	94.382	ENSJJAG00000000737	Pcbp1	100	94.382	Jaculus_jaculus
ENSCJAG00000038388	-	90	82.493	ENSMFAG00000003400	PCBP1	100	82.493	Macaca_fascicularis
ENSCJAG00000038388	-	95	94.382	ENSMMUG00000038295	PCBP1	100	94.382	Macaca_mulatta
ENSCJAG00000038388	-	95	94.382	ENSMNEG00000002934	PCBP1	100	94.382	Macaca_nemestrina
ENSCJAG00000038388	-	95	94.382	ENSMLEG00000027389	PCBP1	100	94.382	Mandrillus_leucophaeus
ENSCJAG00000038388	-	95	94.101	ENSMAUG00000009843	Pcbp1	100	94.101	Mesocricetus_auratus
ENSCJAG00000038388	-	95	94.382	ENSMICG00000038221	PCBP1	100	94.382	Microcebus_murinus
ENSCJAG00000038388	-	95	94.382	ENSMOCG00000008102	Pcbp1	100	94.382	Microtus_ochrogaster
ENSCJAG00000038388	-	95	94.382	MGP_CAROLIEiJ_G0028598	Pcbp1	100	94.382	Mus_caroli
ENSCJAG00000038388	-	95	94.382	ENSMUSG00000051695	Pcbp1	100	94.382	Mus_musculus
ENSCJAG00000038388	-	95	94.382	MGP_PahariEiJ_G0022335	Pcbp1	100	94.382	Mus_pahari
ENSCJAG00000038388	-	95	94.382	MGP_SPRETEiJ_G0029609	Pcbp1	100	94.382	Mus_spretus
ENSCJAG00000038388	-	95	91.573	ENSMPUG00000007175	PCBP1	100	91.573	Mustela_putorius_furo
ENSCJAG00000038388	-	95	94.382	ENSMLUG00000014173	PCBP1	100	94.382	Myotis_lucifugus
ENSCJAG00000038388	-	95	94.382	ENSNGAG00000014909	-	100	94.382	Nannospalax_galili
ENSCJAG00000038388	-	95	94.382	ENSNGAG00000011957	-	100	94.382	Nannospalax_galili
ENSCJAG00000038388	-	95	94.382	ENSNLEG00000018722	PCBP1	100	94.382	Nomascus_leucogenys
ENSCJAG00000038388	-	95	78.652	ENSODEG00000000263	PCBP1	100	78.652	Octodon_degus
ENSCJAG00000038388	-	95	94.382	ENSOCUG00000003634	PCBP1	100	94.382	Oryctolagus_cuniculus
ENSCJAG00000038388	-	95	91.573	ENSOGAG00000028946	PCBP1	100	91.573	Otolemur_garnettii
ENSCJAG00000038388	-	95	94.382	ENSOARG00000019516	PCBP1	100	94.382	Ovis_aries
ENSCJAG00000038388	-	95	92.416	ENSPPAG00000036116	PCBP1	99	92.997	Pan_paniscus
ENSCJAG00000038388	-	95	94.382	ENSPPRG00000020533	PCBP1	100	94.382	Panthera_pardus
ENSCJAG00000038388	-	95	94.382	ENSPTIG00000007318	PCBP1	100	94.382	Panthera_tigris_altaica
ENSCJAG00000038388	-	95	94.382	ENSPTRG00000012025	PCBP1	100	94.382	Pan_troglodytes
ENSCJAG00000038388	-	95	94.382	ENSPANG00000011314	PCBP1	100	94.382	Papio_anubis
ENSCJAG00000038388	-	95	94.382	ENSPPYG00000012328	PCBP1	100	94.382	Pongo_abelii
ENSCJAG00000038388	-	95	94.382	ENSPCOG00000026934	PCBP1	100	94.382	Propithecus_coquereli
ENSCJAG00000038388	-	88	93.072	ENSRROG00000012514	-	100	93.072	Rhinopithecus_roxellana
ENSCJAG00000038388	-	100	93.085	ENSRROG00000009684	-	100	93.085	Rhinopithecus_roxellana
ENSCJAG00000038388	-	100	79.521	ENSSBOG00000035309	-	100	79.521	Saimiri_boliviensis_boliviensis
ENSCJAG00000038388	-	95	94.101	ENSSSCG00000027224	PCBP1	100	94.101	Sus_scrofa
ENSCJAG00000038388	-	86	93.808	ENSVVUG00000028033	PCBP1	99	93.808	Vulpes_vulpes