EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000038506 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 1278 bases
Position: chrNTIC01008890.1:21832390-21833667
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000055219	RRM_1	PF00076.22	4.9e-41	1	2
ENSCJAP00000055219	RRM_1	PF00076.22	4.9e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000081736	-	525	-	ENSCJAP00000055219	174 (aa)	-	A0A2R8M7W1

Gene Model

Click here to download ENSCJAG00000038506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000038506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000038506	-	95	67.500	ENSCJAG00000003665	PABPC5	94	66.467
ENSCJAG00000038506	-	100	89.655	ENSCJAG00000015833	PABPC1	58	89.655
ENSCJAG00000038506	-	94	34.940	ENSCJAG00000046587	ELAVL1	84	34.940
ENSCJAG00000038506	-	100	88.953	ENSCJAG00000041162	-	73	88.953
ENSCJAG00000038506	-	88	30.323	ENSCJAG00000013725	ELAVL4	57	35.616
ENSCJAG00000038506	-	100	63.793	ENSCJAG00000045332	PABPC4L	80	63.793
ENSCJAG00000038506	-	100	75.287	ENSCJAG00000017628	PABPC1L	57	75.287
ENSCJAG00000038506	-	95	74.545	ENSCJAG00000041326	-	81	74.545
ENSCJAG00000038506	-	91	31.429	ENSCJAG00000008064	ELAVL2	60	31.429
ENSCJAG00000038506	-	92	35.185	ENSCJAG00000019278	TIA1	85	35.185
ENSCJAG00000038506	-	95	35.928	ENSCJAG00000019682	TIAL1	71	35.928
ENSCJAG00000038506	-	95	80.606	ENSCJAG00000045282	-	66	80.606
ENSCJAG00000038506	-	100	83.908	ENSCJAG00000002512	-	58	83.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000038506	-	100	76.437	ENSG00000101104	PABPC1L	80	76.437	Homo_sapiens
ENSCJAG00000038506	-	100	78.161	ENSAPOG00000010842	pabpc1l	60	78.161	Acanthochromis_polyacanthus
ENSCJAG00000038506	-	100	78.736	ENSAMEG00000004099	PABPC1L	57	78.736	Ailuropoda_melanoleuca
ENSCJAG00000038506	-	100	81.034	ENSACIG00000021004	-	68	81.208	Amphilophus_citrinellus
ENSCJAG00000038506	-	100	78.161	ENSAOCG00000006167	-	58	78.161	Amphiprion_ocellaris
ENSCJAG00000038506	-	100	78.235	ENSAPEG00000010558	-	84	78.235	Amphiprion_percula
ENSCJAG00000038506	-	100	80.460	ENSATEG00000007428	pabpc1l	60	80.460	Anabas_testudineus
ENSCJAG00000038506	-	95	79.394	ENSAPLG00000008415	PABPC1L	58	78.613	Anas_platyrhynchos
ENSCJAG00000038506	-	100	81.034	ENSACAG00000011841	PABPC1L	58	81.034	Anolis_carolinensis
ENSCJAG00000038506	-	100	75.287	ENSANAG00000026826	PABPC1L	57	75.287	Aotus_nancymaae
ENSCJAG00000038506	-	100	81.034	ENSACLG00000024791	pabpc1l	58	81.034	Astatotilapia_calliptera
ENSCJAG00000038506	-	100	78.736	ENSAMXG00000013552	pabpc1l	59	78.736	Astyanax_mexicanus
ENSCJAG00000038506	-	98	78.363	ENSBTAG00000055300	-	100	78.363	Bos_taurus
ENSCJAG00000038506	-	100	77.586	ENSCAFG00000009573	PABPC1L	57	77.586	Canis_familiaris
ENSCJAG00000038506	-	100	77.586	ENSCAFG00020013828	PABPC1L	60	77.586	Canis_lupus_dingo
ENSCJAG00000038506	-	100	78.736	ENSCHIG00000025759	PABPC1L	56	78.736	Capra_hircus
ENSCJAG00000038506	-	100	77.011	ENSTSYG00000006645	PABPC1L	60	77.011	Carlito_syrichta
ENSCJAG00000038506	-	94	72.816	ENSCAPG00000014519	PABPC1L	56	72.816	Cavia_aperea
ENSCJAG00000038506	-	100	74.713	ENSCPOG00000013633	PABPC1L	59	74.713	Cavia_porcellus
ENSCJAG00000038506	-	100	75.287	ENSCCAG00000023338	PABPC1L	57	75.287	Cebus_capucinus
ENSCJAG00000038506	-	100	77.011	ENSCATG00000034065	PABPC1L	60	77.011	Cercocebus_atys
ENSCJAG00000038506	-	100	73.563	ENSCLAG00000005298	PABPC1L	59	73.563	Chinchilla_lanigera
ENSCJAG00000038506	-	100	76.437	ENSCSAG00000014242	PABPC1L	60	76.437	Chlorocebus_sabaeus
ENSCJAG00000038506	-	72	88.000	ENSCPBG00000007810	-	75	88.000	Chrysemys_picta_bellii
ENSCJAG00000038506	-	100	80.460	ENSCPBG00000017755	-	82	80.460	Chrysemys_picta_bellii
ENSCJAG00000038506	-	99	80.745	ENSCSAVG00000004246	-	62	80.745	Ciona_savignyi
ENSCJAG00000038506	-	100	74.157	ENSCSAVG00000003102	-	100	78.289	Ciona_savignyi
ENSCJAG00000038506	-	100	77.011	ENSCANG00000037530	PABPC1L	60	77.011	Colobus_angolensis_palliatus
ENSCJAG00000038506	-	100	70.115	ENSCGRG00001021938	Pabpc1l	60	70.115	Cricetulus_griseus_chok1gshd
ENSCJAG00000038506	-	100	70.115	ENSCGRG00000007946	Pabpc1l	60	70.115	Cricetulus_griseus_crigri
ENSCJAG00000038506	-	98	78.363	ENSCSEG00000021295	pabpc1l	66	78.363	Cynoglossus_semilaevis
ENSCJAG00000038506	-	100	79.310	ENSCVAG00000015943	-	86	77.444	Cyprinodon_variegatus
ENSCJAG00000038506	-	100	78.736	ENSDARG00000002597	pabpc1l	88	75.188	Danio_rerio
ENSCJAG00000038506	-	100	77.011	ENSDNOG00000048450	PABPC1L	60	77.011	Dasypus_novemcinctus
ENSCJAG00000038506	-	100	74.138	ENSDORG00000001067	Pabpc1l	60	74.138	Dipodomys_ordii
ENSCJAG00000038506	-	98	76.023	ENSEASG00005023408	-	100	76.023	Equus_asinus_asinus
ENSCJAG00000038506	-	86	44.000	ENSECAG00000040139	-	58	44.000	Equus_caballus
ENSCJAG00000038506	-	100	75.862	ENSEEUG00000005978	PABPC1L	60	75.862	Erinaceus_europaeus
ENSCJAG00000038506	-	100	78.736	ENSELUG00000001811	pabpc1l	66	78.736	Esox_lucius
ENSCJAG00000038506	-	100	77.586	ENSFCAG00000011692	PABPC1L	60	77.586	Felis_catus
ENSCJAG00000038506	-	100	79.885	ENSFALG00000005372	PABPC1L	62	79.885	Ficedula_albicollis
ENSCJAG00000038506	-	100	74.713	ENSFDAG00000008291	PABPC1L	61	74.713	Fukomys_damarensis
ENSCJAG00000038506	-	100	80.460	ENSFHEG00000003398	pabpc1l	65	80.117	Fundulus_heteroclitus
ENSCJAG00000038506	-	98	81.333	ENSGMOG00000004437	pabpc1l	59	77.586	Gadus_morhua
ENSCJAG00000038506	-	100	81.034	ENSGALG00000004123	PABPC1L	87	81.034	Gallus_gallus
ENSCJAG00000038506	-	100	80.117	ENSGAFG00000021057	pabpc1l	53	80.117	Gambusia_affinis
ENSCJAG00000038506	-	100	79.310	ENSGACG00000002792	pabpc1l	59	79.310	Gasterosteus_aculeatus
ENSCJAG00000038506	-	100	80.460	ENSGAGG00000000589	PABPC1L	66	80.460	Gopherus_agassizii
ENSCJAG00000038506	-	100	76.437	ENSGGOG00000004584	PABPC1L	60	76.437	Gorilla_gorilla
ENSCJAG00000038506	-	100	81.034	ENSHBUG00000006134	pabpc1l	65	81.034	Haplochromis_burtoni
ENSCJAG00000038506	-	100	74.713	ENSHGLG00000008434	PABPC1L	60	74.713	Heterocephalus_glaber_female
ENSCJAG00000038506	-	100	74.713	ENSHGLG00100012151	PABPC1L	60	74.713	Heterocephalus_glaber_male
ENSCJAG00000038506	-	100	88.506	ENSHGLG00100019506	-	96	88.506	Heterocephalus_glaber_male
ENSCJAG00000038506	-	100	78.736	ENSHCOG00000009270	pabpc1l	64	78.736	Hippocampus_comes
ENSCJAG00000038506	-	76	57.143	ENSIPUG00000005537	-	100	57.143	Ictalurus_punctatus
ENSCJAG00000038506	-	93	57.407	ENSIPUG00000006780	-	77	57.407	Ictalurus_punctatus
ENSCJAG00000038506	-	100	79.885	ENSIPUG00000012602	pabpc1l	63	79.885	Ictalurus_punctatus
ENSCJAG00000038506	-	93	57.407	ENSIPUG00000006760	-	80	57.407	Ictalurus_punctatus
ENSCJAG00000038506	-	100	75.287	ENSSTOG00000003739	PABPC1L	60	75.287	Ictidomys_tridecemlineatus
ENSCJAG00000038506	-	97	43.878	ENSJJAG00000022406	Pabpc1l	54	43.878	Jaculus_jaculus
ENSCJAG00000038506	-	100	80.460	ENSKMAG00000016847	pabpc1l	65	80.460	Kryptolebias_marmoratus
ENSCJAG00000038506	-	100	78.161	ENSLBEG00000010084	pabpc1l	61	78.161	Labrus_bergylta
ENSCJAG00000038506	-	100	81.609	ENSLACG00000005762	PABPC1L	67	81.609	Latimeria_chalumnae
ENSCJAG00000038506	-	100	79.885	ENSLOCG00000007519	pabpc1l	58	79.885	Lepisosteus_oculatus
ENSCJAG00000038506	-	100	77.586	ENSLAFG00000003553	PABPC1L	59	77.586	Loxodonta_africana
ENSCJAG00000038506	-	100	77.011	ENSMFAG00000040365	PABPC1L	60	77.011	Macaca_fascicularis
ENSCJAG00000038506	-	100	77.011	ENSMNEG00000032298	PABPC1L	59	77.011	Macaca_nemestrina
ENSCJAG00000038506	-	100	77.011	ENSMLEG00000043139	PABPC1L	60	77.011	Mandrillus_leucophaeus
ENSCJAG00000038506	-	100	77.586	ENSMAMG00000011854	pabpc1l	60	77.586	Mastacembelus_armatus
ENSCJAG00000038506	-	100	81.034	ENSMZEG00005023713	pabpc1l	58	81.034	Maylandia_zebra
ENSCJAG00000038506	-	100	81.609	ENSMGAG00000003674	PABPC1L	58	81.609	Meleagris_gallopavo
ENSCJAG00000038506	-	100	71.264	ENSMOCG00000013186	Pabpc1l	60	71.264	Microtus_ochrogaster
ENSCJAG00000038506	-	100	79.885	ENSMMOG00000020574	-	90	78.195	Mola_mola
ENSCJAG00000038506	-	100	78.161	ENSMODG00000016198	PABPC1L	62	78.161	Monodelphis_domestica
ENSCJAG00000038506	-	100	77.586	ENSMALG00000021622	pabpc1l	61	77.586	Monopterus_albus
ENSCJAG00000038506	-	100	70.115	MGP_CAROLIEiJ_G0024627	Pabpc1l	60	70.115	Mus_caroli
ENSCJAG00000038506	-	100	70.115	ENSMUSG00000054582	Pabpc1l	60	70.115	Mus_musculus
ENSCJAG00000038506	-	95	72.727	MGP_PahariEiJ_G0026071	Pabpc1l	59	72.727	Mus_pahari
ENSCJAG00000038506	-	100	70.115	MGP_SPRETEiJ_G0025549	Pabpc1l	60	70.115	Mus_spretus
ENSCJAG00000038506	-	100	78.736	ENSMPUG00000017646	PABPC1L	59	78.736	Mustela_putorius_furo
ENSCJAG00000038506	-	100	76.301	ENSMLUG00000006324	PABPC1L	58	76.301	Myotis_lucifugus
ENSCJAG00000038506	-	100	71.264	ENSNGAG00000010458	Pabpc1l	60	71.264	Nannospalax_galili
ENSCJAG00000038506	-	100	81.034	ENSNBRG00000016633	pabpc1l	68	81.208	Neolamprologus_brichardi
ENSCJAG00000038506	-	100	77.011	ENSMEUG00000007905	-	60	77.011	Notamacropus_eugenii
ENSCJAG00000038506	-	100	75.862	ENSOPRG00000011846	PABPC1L	60	75.862	Ochotona_princeps
ENSCJAG00000038506	-	94	80.368	ENSODEG00000002920	-	96	80.368	Octodon_degus
ENSCJAG00000038506	-	100	75.287	ENSODEG00000015482	PABPC1L	68	75.287	Octodon_degus
ENSCJAG00000038506	-	100	81.034	ENSONIG00000017314	pabpc1l	58	81.034	Oreochromis_niloticus
ENSCJAG00000038506	-	100	74.713	ENSOANG00000015793	-	56	75.294	Ornithorhynchus_anatinus
ENSCJAG00000038506	-	100	76.437	ENSOCUG00000003005	PABPC1L	56	76.437	Oryctolagus_cuniculus
ENSCJAG00000038506	-	100	80.460	ENSORLG00000010322	pabpc1l	69	80.537	Oryzias_latipes
ENSCJAG00000038506	-	100	80.460	ENSORLG00020021193	pabpc1l	69	80.537	Oryzias_latipes_hni
ENSCJAG00000038506	-	100	80.460	ENSORLG00015017018	pabpc1l	69	80.537	Oryzias_latipes_hsok
ENSCJAG00000038506	-	100	80.702	ENSOMEG00000010789	pabpc1l	53	80.702	Oryzias_melastigma
ENSCJAG00000038506	-	100	74.713	ENSOGAG00000032999	PABPC1L	59	74.713	Otolemur_garnettii
ENSCJAG00000038506	-	100	78.161	ENSOARG00000004578	PABPC1L	60	78.161	Ovis_aries
ENSCJAG00000038506	-	100	76.437	ENSPPAG00000039677	PABPC1L	60	76.437	Pan_paniscus
ENSCJAG00000038506	-	100	77.586	ENSPPRG00000019327	-	87	77.586	Panthera_pardus
ENSCJAG00000038506	-	97	77.976	ENSPTIG00000006524	PABPC1L	60	77.976	Panthera_tigris_altaica
ENSCJAG00000038506	-	100	76.437	ENSPTRG00000013531	PABPC1L	80	76.437	Pan_troglodytes
ENSCJAG00000038506	-	100	77.011	ENSPANG00000018788	PABPC1L	60	77.011	Papio_anubis
ENSCJAG00000038506	-	50	70.115	ENSPKIG00000016801	-	96	70.115	Paramormyrops_kingsleyae
ENSCJAG00000038506	-	100	78.161	ENSPKIG00000007322	pabpc1l	64	77.326	Paramormyrops_kingsleyae
ENSCJAG00000038506	-	77	80.597	ENSPKIG00000016810	-	92	80.597	Paramormyrops_kingsleyae
ENSCJAG00000038506	-	100	80.460	ENSPSIG00000013289	PABPC1L	86	80.460	Pelodiscus_sinensis
ENSCJAG00000038506	-	100	79.885	ENSPMGG00000023117	pabpc1l	92	76.296	Periophthalmus_magnuspinnatus
ENSCJAG00000038506	-	100	70.690	ENSPEMG00000020671	Pabpc1l	60	70.690	Peromyscus_maniculatus_bairdii
ENSCJAG00000038506	-	100	80.460	ENSPFOG00000013241	pabpc1l	59	80.460	Poecilia_formosa
ENSCJAG00000038506	-	100	80.460	ENSPLAG00000017490	-	65	80.460	Poecilia_latipinna
ENSCJAG00000038506	-	76	78.195	ENSPLAG00000023686	-	92	78.195	Poecilia_latipinna
ENSCJAG00000038506	-	76	78.195	ENSPMEG00000009185	-	88	78.195	Poecilia_mexicana
ENSCJAG00000038506	-	100	80.460	ENSPMEG00000007677	pabpc1l	59	80.460	Poecilia_mexicana
ENSCJAG00000038506	-	100	80.460	ENSPREG00000015886	pabpc1l	89	80.460	Poecilia_reticulata
ENSCJAG00000038506	-	100	76.437	ENSPPYG00000011042	PABPC1L	60	76.437	Pongo_abelii
ENSCJAG00000038506	-	100	77.011	ENSPCOG00000020630	PABPC1L	60	77.011	Propithecus_coquereli
ENSCJAG00000038506	-	100	77.586	ENSPVAG00000012663	PABPC1L	60	77.586	Pteropus_vampyrus
ENSCJAG00000038506	-	100	81.034	ENSPNYG00000004101	pabpc1l	68	81.208	Pundamilia_nyererei
ENSCJAG00000038506	-	100	69.540	ENSRNOG00000012750	Pabpc1l	60	69.540	Rattus_norvegicus
ENSCJAG00000038506	-	100	76.437	ENSRBIG00000035381	PABPC1L	60	76.437	Rhinopithecus_bieti
ENSCJAG00000038506	-	100	75.862	ENSRROG00000044498	PABPC1L	60	75.862	Rhinopithecus_roxellana
ENSCJAG00000038506	-	100	76.437	ENSSBOG00000009532	-	57	76.437	Saimiri_boliviensis_boliviensis
ENSCJAG00000038506	-	100	80.460	ENSSFOG00015017304	pabpc1l	59	80.460	Scleropages_formosus
ENSCJAG00000038506	-	100	78.736	ENSSMAG00000010516	pabpc1l	98	74.820	Scophthalmus_maximus
ENSCJAG00000038506	-	100	79.310	ENSSDUG00000014743	pabpc1l	59	79.310	Seriola_dumerili
ENSCJAG00000038506	-	100	79.310	ENSSLDG00000006981	pabpc1l	71	79.310	Seriola_lalandi_dorsalis
ENSCJAG00000038506	-	100	79.885	ENSSPUG00000004233	PABPC1L	58	79.885	Sphenodon_punctatus
ENSCJAG00000038506	-	100	78.736	ENSSPAG00000017137	pabpc1l	66	78.736	Stegastes_partitus
ENSCJAG00000038506	-	100	77.586	ENSSSCG00000007382	PABPC1L	60	77.586	Sus_scrofa
ENSCJAG00000038506	-	100	81.034	ENSTGUG00000005114	PABPC1L	60	81.034	Taeniopygia_guttata
ENSCJAG00000038506	-	100	79.885	ENSTRUG00000011085	pabpc1l	59	79.885	Takifugu_rubripes
ENSCJAG00000038506	-	100	72.989	ENSTNIG00000017903	pabpc1l	58	72.989	Tetraodon_nigroviridis
ENSCJAG00000038506	-	100	77.586	ENSTTRG00000007618	PABPC1L	62	77.586	Tursiops_truncatus
ENSCJAG00000038506	-	100	78.736	ENSUAMG00000017682	PABPC1L	62	78.736	Ursus_americanus
ENSCJAG00000038506	-	98	72.414	ENSUMAG00000025436	PABPC1L	79	72.414	Ursus_maritimus
ENSCJAG00000038506	-	100	78.161	ENSVVUG00000018939	PABPC1L	61	78.161	Vulpes_vulpes
ENSCJAG00000038506	-	100	79.310	ENSXETG00000022831	pabpc1l	55	79.310	Xenopus_tropicalis
ENSCJAG00000038506	-	100	80.460	ENSXCOG00000005459	pabpc1l	99	74.306	Xiphophorus_couchianus
ENSCJAG00000038506	-	100	80.460	ENSXMAG00000017135	pabpc1l	65	80.460	Xiphophorus_maculatus