EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000038886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 3267 bases
Position: chrNTIC01011113.1:17625579-17628845
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000063120	Fox-1_C	PF12414.8	3.5e-40	1	1
ENSCJAP00000063120	RRM_1	PF00076.22	7.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000080490	-	1167	-	ENSCJAP00000063120	388 (aa)	-	A0A2R8MPM6

Gene Model

Click here to download ENSCJAG00000038886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000038886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000038886	-	96	97.884	ENSCJAG00000019456	-	99	97.884
ENSCJAG00000038886	-	84	55.294	ENSCJAG00000009563	RBFOX3	100	53.980
ENSCJAG00000038886	-	95	62.745	ENSCJAG00000017351	RBFOX1	94	63.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000038886	-	96	98.930	ENSG00000100320	RBFOX2	100	99.573	Homo_sapiens
ENSCJAG00000038886	-	71	68.013	ENSAPOG00000021561	-	81	61.622	Acanthochromis_polyacanthus
ENSCJAG00000038886	-	75	66.877	ENSAPOG00000004877	rbfox2	72	60.763	Acanthochromis_polyacanthus
ENSCJAG00000038886	-	75	97.973	ENSAMEG00000007228	RBFOX2	99	97.973	Ailuropoda_melanoleuca
ENSCJAG00000038886	-	62	59.449	ENSACIG00000001690	rbfox2	90	56.835	Amphilophus_citrinellus
ENSCJAG00000038886	-	88	59.726	ENSAOCG00000015358	-	82	61.685	Amphiprion_ocellaris
ENSCJAG00000038886	-	70	71.875	ENSAOCG00000013752	rbfox2	72	61.035	Amphiprion_ocellaris
ENSCJAG00000038886	-	70	71.875	ENSAPEG00000022359	rbfox2	72	61.035	Amphiprion_percula
ENSCJAG00000038886	-	88	59.726	ENSAPEG00000013905	-	72	61.685	Amphiprion_percula
ENSCJAG00000038886	-	71	67.797	ENSATEG00000009959	-	81	59.730	Anabas_testudineus
ENSCJAG00000038886	-	70	70.383	ENSATEG00000021951	rbfox2	72	60.882	Anabas_testudineus
ENSCJAG00000038886	-	96	95.710	ENSAPLG00000007609	RBFOX2	99	95.710	Anas_platyrhynchos
ENSCJAG00000038886	-	96	94.385	ENSACAG00000016535	RBFOX2	83	94.385	Anolis_carolinensis
ENSCJAG00000038886	-	75	99.658	ENSANAG00000015245	RBFOX2	97	99.658	Aotus_nancymaae
ENSCJAG00000038886	-	70	71.379	ENSACLG00000009744	rbfox2	72	60.976	Astatotilapia_calliptera
ENSCJAG00000038886	-	88	59.783	ENSACLG00000017380	-	81	59.946	Astatotilapia_calliptera
ENSCJAG00000038886	-	88	60.215	ENSAMXG00000011451	rbfox2	89	58.791	Astyanax_mexicanus
ENSCJAG00000038886	-	95	97.581	ENSBTAG00000020125	RBFOX2	100	97.581	Bos_taurus
ENSCJAG00000038886	-	96	99.194	ENSCAFG00000001701	RBFOX2	99	99.194	Canis_familiaris
ENSCJAG00000038886	-	96	86.472	ENSCAFG00020004541	RBFOX2	92	86.575	Canis_lupus_dingo
ENSCJAG00000038886	-	96	97.855	ENSCHIG00000014027	RBFOX2	99	95.467	Capra_hircus
ENSCJAG00000038886	-	96	98.396	ENSTSYG00000014123	RBFOX2	99	98.396	Carlito_syrichta
ENSCJAG00000038886	-	91	86.236	ENSCAPG00000014308	RBFOX2	93	83.193	Cavia_aperea
ENSCJAG00000038886	-	95	97.574	ENSCPOG00000022180	RBFOX2	97	97.574	Cavia_porcellus
ENSCJAG00000038886	-	96	99.198	ENSCCAG00000036584	RBFOX2	99	99.198	Cebus_capucinus
ENSCJAG00000038886	-	96	98.930	ENSCATG00000038655	RBFOX2	99	98.930	Cercocebus_atys
ENSCJAG00000038886	-	96	94.149	ENSCLAG00000017106	RBFOX2	99	94.149	Chinchilla_lanigera
ENSCJAG00000038886	-	79	96.129	ENSCSAG00000008110	RBFOX2	85	96.129	Chlorocebus_sabaeus
ENSCJAG00000038886	-	73	94.792	ENSCHOG00000002887	RBFOX2	96	94.604	Choloepus_hoffmanni
ENSCJAG00000038886	-	92	98.039	ENSCPBG00000023144	RBFOX2	100	98.039	Chrysemys_picta_bellii
ENSCJAG00000038886	-	96	98.930	ENSCANG00000035832	RBFOX2	100	99.160	Colobus_angolensis_palliatus
ENSCJAG00000038886	-	95	98.098	ENSCGRG00001017727	Rbfox2	98	98.098	Cricetulus_griseus_chok1gshd
ENSCJAG00000038886	-	96	96.306	ENSCGRG00000014237	Rbfox2	99	96.306	Cricetulus_griseus_crigri
ENSCJAG00000038886	-	70	66.667	ENSCSEG00000007360	-	76	59.896	Cynoglossus_semilaevis
ENSCJAG00000038886	-	70	70.447	ENSCSEG00000007748	rbfox2	73	60.106	Cynoglossus_semilaevis
ENSCJAG00000038886	-	60	65.079	ENSCVAG00000004491	rbfox2	100	66.403	Cyprinodon_variegatus
ENSCJAG00000038886	-	97	56.218	ENSCVAG00000016503	-	99	57.364	Cyprinodon_variegatus
ENSCJAG00000038886	-	64	64.706	ENSDARG00000052182	rbfox2	100	65.074	Danio_rerio
ENSCJAG00000038886	-	95	98.370	ENSDNOG00000004372	RBFOX2	93	98.370	Dasypus_novemcinctus
ENSCJAG00000038886	-	92	92.997	ENSDORG00000015003	Rbfox2	100	92.997	Dipodomys_ordii
ENSCJAG00000038886	-	96	86.096	ENSETEG00000005638	RBFOX2	97	86.096	Echinops_telfairi
ENSCJAG00000038886	-	96	96.791	ENSEASG00005018920	RBFOX2	84	96.791	Equus_asinus_asinus
ENSCJAG00000038886	-	96	96.791	ENSECAG00000018923	RBFOX2	84	96.791	Equus_caballus
ENSCJAG00000038886	-	93	91.460	ENSEEUG00000004549	RBFOX2	97	91.460	Erinaceus_europaeus
ENSCJAG00000038886	-	74	57.329	ENSELUG00000000102	rbfox2	100	61.887	Esox_lucius
ENSCJAG00000038886	-	79	60.278	ENSELUG00000009404	-	75	57.556	Esox_lucius
ENSCJAG00000038886	-	95	97.051	ENSFCAG00000010061	RBFOX2	99	93.316	Felis_catus
ENSCJAG00000038886	-	95	96.496	ENSFALG00000013111	RBFOX2	97	96.496	Ficedula_albicollis
ENSCJAG00000038886	-	82	75.851	ENSFDAG00000006204	RBFOX2	86	78.431	Fukomys_damarensis
ENSCJAG00000038886	-	71	69.492	ENSFHEG00000010546	rbfox2	72	60.270	Fundulus_heteroclitus
ENSCJAG00000038886	-	71	66.786	ENSGMOG00000005278	rbfox2	79	63.000	Gadus_morhua
ENSCJAG00000038886	-	75	94.845	ENSGALG00000012540	RBFOX2	79	94.845	Gallus_gallus
ENSCJAG00000038886	-	60	66.000	ENSGAFG00000008448	rbfox2	100	67.331	Gambusia_affinis
ENSCJAG00000038886	-	70	68.772	ENSGACG00000007174	-	99	58.333	Gasterosteus_aculeatus
ENSCJAG00000038886	-	81	61.562	ENSGACG00000015968	rbfox2	87	61.562	Gasterosteus_aculeatus
ENSCJAG00000038886	-	96	97.333	ENSGAGG00000025884	RBFOX2	99	97.333	Gopherus_agassizii
ENSCJAG00000038886	-	96	98.930	ENSGGOG00000037332	RBFOX2	99	98.930	Gorilla_gorilla
ENSCJAG00000038886	-	70	71.379	ENSHBUG00000004356	rbfox2	76	60.976	Haplochromis_burtoni
ENSCJAG00000038886	-	88	59.946	ENSHBUG00000000856	-	75	60.000	Haplochromis_burtoni
ENSCJAG00000038886	-	96	97.861	ENSHGLG00000012907	RBFOX2	99	97.861	Heterocephalus_glaber_female
ENSCJAG00000038886	-	96	96.306	ENSHGLG00100009986	RBFOX2	99	96.306	Heterocephalus_glaber_male
ENSCJAG00000038886	-	71	67.327	ENSHCOG00000005662	-	71	60.647	Hippocampus_comes
ENSCJAG00000038886	-	70	70.000	ENSHCOG00000016102	rbfox2	63	65.831	Hippocampus_comes
ENSCJAG00000038886	-	88	57.258	ENSIPUG00000016896	rbfox2	89	58.602	Ictalurus_punctatus
ENSCJAG00000038886	-	96	95.213	ENSSTOG00000014841	RBFOX2	99	95.213	Ictidomys_tridecemlineatus
ENSCJAG00000038886	-	96	93.351	ENSJJAG00000014885	Rbfox2	99	93.085	Jaculus_jaculus
ENSCJAG00000038886	-	77	67.405	ENSKMAG00000021880	-	72	60.942	Kryptolebias_marmoratus
ENSCJAG00000038886	-	96	57.215	ENSKMAG00000013354	-	99	60.349	Kryptolebias_marmoratus
ENSCJAG00000038886	-	51	61.215	ENSLBEG00000026187	rbfox2	82	62.326	Labrus_bergylta
ENSCJAG00000038886	-	58	46.639	ENSLBEG00000028310	-	69	47.479	Labrus_bergylta
ENSCJAG00000038886	-	95	76.053	ENSLACG00000003339	RBFOX2	98	76.316	Latimeria_chalumnae
ENSCJAG00000038886	-	95	96.237	ENSLAFG00000027140	RBFOX2	100	96.237	Loxodonta_africana
ENSCJAG00000038886	-	96	98.930	ENSMFAG00000031994	RBFOX2	99	98.930	Macaca_fascicularis
ENSCJAG00000038886	-	100	95.116	ENSMMUG00000014010	RBFOX2	100	99.160	Macaca_mulatta
ENSCJAG00000038886	-	96	98.930	ENSMNEG00000034388	RBFOX2	99	98.930	Macaca_nemestrina
ENSCJAG00000038886	-	96	98.930	ENSMLEG00000005854	RBFOX2	99	98.930	Mandrillus_leucophaeus
ENSCJAG00000038886	-	71	66.554	ENSMAMG00000008980	-	75	61.930	Mastacembelus_armatus
ENSCJAG00000038886	-	70	70.790	ENSMAMG00000004293	rbfox2	84	63.924	Mastacembelus_armatus
ENSCJAG00000038886	-	70	69.097	ENSMZEG00005023838	rbfox2	89	59.128	Maylandia_zebra
ENSCJAG00000038886	-	88	57.065	ENSMZEG00005004959	-	81	59.946	Maylandia_zebra
ENSCJAG00000038886	-	50	79.024	ENSMGAG00000012724	RBFOX2	100	79.024	Meleagris_gallopavo
ENSCJAG00000038886	-	96	94.415	ENSMAUG00000018816	Rbfox2	99	94.415	Mesocricetus_auratus
ENSCJAG00000038886	-	96	97.354	ENSMICG00000035417	RBFOX2	99	97.354	Microcebus_murinus
ENSCJAG00000038886	-	77	86.532	ENSMICG00000046341	-	79	87.119	Microcebus_murinus
ENSCJAG00000038886	-	96	94.947	ENSMOCG00000009327	Rbfox2	99	94.947	Microtus_ochrogaster
ENSCJAG00000038886	-	89	52.151	ENSMMOG00000008287	rbfox2	100	61.303	Mola_mola
ENSCJAG00000038886	-	95	93.176	ENSMODG00000001122	RBFOX2	100	93.176	Monodelphis_domestica
ENSCJAG00000038886	-	64	68.421	ENSMALG00000000623	rbfox2	100	69.663	Monopterus_albus
ENSCJAG00000038886	-	96	97.600	MGP_CAROLIEiJ_G0019957	Rbfox2	99	97.600	Mus_caroli
ENSCJAG00000038886	-	96	97.600	ENSMUSG00000033565	Rbfox2	99	97.600	Mus_musculus
ENSCJAG00000038886	-	96	97.600	MGP_PahariEiJ_G0019967	Rbfox2	99	97.600	Mus_pahari
ENSCJAG00000038886	-	96	97.600	MGP_SPRETEiJ_G0020860	Rbfox2	99	97.600	Mus_spretus
ENSCJAG00000038886	-	96	96.561	ENSMPUG00000012555	RBFOX2	94	96.561	Mustela_putorius_furo
ENSCJAG00000038886	-	96	95.013	ENSMLUG00000002676	RBFOX2	95	95.013	Myotis_lucifugus
ENSCJAG00000038886	-	96	94.149	ENSNGAG00000020528	Rbfox2	99	94.149	Nannospalax_galili
ENSCJAG00000038886	-	71	59.184	ENSNBRG00000001568	-	68	59.661	Neolamprologus_brichardi
ENSCJAG00000038886	-	70	71.626	ENSNBRG00000018155	rbfox2	72	60.870	Neolamprologus_brichardi
ENSCJAG00000038886	-	96	98.663	ENSNLEG00000034979	RBFOX2	99	98.663	Nomascus_leucogenys
ENSCJAG00000038886	-	96	91.005	ENSMEUG00000001547	RBFOX2	100	92.162	Notamacropus_eugenii
ENSCJAG00000038886	-	96	85.714	ENSOPRG00000014878	RBFOX2	83	85.714	Ochotona_princeps
ENSCJAG00000038886	-	96	95.503	ENSODEG00000009937	RBFOX2	99	94.415	Octodon_degus
ENSCJAG00000038886	-	70	75.352	ENSONIG00000017998	rbfox2	88	63.636	Oreochromis_niloticus
ENSCJAG00000038886	-	88	60.882	ENSONIG00000008341	-	90	64.286	Oreochromis_niloticus
ENSCJAG00000038886	-	78	94.408	ENSOANG00000007489	RBFOX2	98	94.408	Ornithorhynchus_anatinus
ENSCJAG00000038886	-	96	85.714	ENSOCUG00000001349	RBFOX2	94	85.714	Oryctolagus_cuniculus
ENSCJAG00000038886	-	95	58.987	ENSORLG00000014948	-	78	61.307	Oryzias_latipes
ENSCJAG00000038886	-	70	71.379	ENSORLG00000028082	rbfox2	80	67.188	Oryzias_latipes
ENSCJAG00000038886	-	70	71.379	ENSORLG00020008976	rbfox2	80	67.188	Oryzias_latipes_hni
ENSCJAG00000038886	-	95	57.722	ENSORLG00020005676	-	78	61.055	Oryzias_latipes_hni
ENSCJAG00000038886	-	70	71.379	ENSORLG00015007027	rbfox2	80	67.188	Oryzias_latipes_hsok
ENSCJAG00000038886	-	95	58.734	ENSORLG00015000797	-	78	61.055	Oryzias_latipes_hsok
ENSCJAG00000038886	-	70	71.280	ENSOMEG00000015966	rbfox2	63	65.312	Oryzias_melastigma
ENSCJAG00000038886	-	88	60.598	ENSOMEG00000007909	-	78	60.697	Oryzias_melastigma
ENSCJAG00000038886	-	96	97.867	ENSOGAG00000033250	RBFOX2	100	97.867	Otolemur_garnettii
ENSCJAG00000038886	-	95	95.968	ENSOARG00000018669	RBFOX2	98	95.968	Ovis_aries
ENSCJAG00000038886	-	96	98.930	ENSPPAG00000035653	RBFOX2	99	98.930	Pan_paniscus
ENSCJAG00000038886	-	96	96.032	ENSPPRG00000015635	RBFOX2	100	98.319	Panthera_pardus
ENSCJAG00000038886	-	96	96.570	ENSPTIG00000019147	RBFOX2	99	96.570	Panthera_tigris_altaica
ENSCJAG00000038886	-	96	98.930	ENSPTRG00000014305	RBFOX2	99	98.930	Pan_troglodytes
ENSCJAG00000038886	-	96	96.561	ENSPANG00000007030	RBFOX2	99	94.211	Papio_anubis
ENSCJAG00000038886	-	88	55.108	ENSPKIG00000006854	-	73	56.077	Paramormyrops_kingsleyae
ENSCJAG00000038886	-	76	59.813	ENSPKIG00000010816	-	79	61.371	Paramormyrops_kingsleyae
ENSCJAG00000038886	-	96	97.067	ENSPSIG00000017828	RBFOX2	99	97.067	Pelodiscus_sinensis
ENSCJAG00000038886	-	64	66.160	ENSPMGG00000007138	rbfox2	100	68.182	Periophthalmus_magnuspinnatus
ENSCJAG00000038886	-	53	71.429	ENSPMGG00000016969	-	79	61.324	Periophthalmus_magnuspinnatus
ENSCJAG00000038886	-	96	94.947	ENSPEMG00000012542	Rbfox2	99	94.947	Peromyscus_maniculatus_bairdii
ENSCJAG00000038886	-	96	96.011	ENSPCIG00000021550	RBFOX2	100	96.648	Phascolarctos_cinereus
ENSCJAG00000038886	-	81	61.357	ENSPFOG00000001869	-	100	69.338	Poecilia_formosa
ENSCJAG00000038886	-	70	71.379	ENSPFOG00000014209	rbfox2	72	60.976	Poecilia_formosa
ENSCJAG00000038886	-	64	68.421	ENSPLAG00000017308	rbfox2	100	68.421	Poecilia_latipinna
ENSCJAG00000038886	-	64	65.185	ENSPLAG00000002710	-	100	68.132	Poecilia_latipinna
ENSCJAG00000038886	-	64	66.052	ENSPMEG00000013663	-	100	67.883	Poecilia_mexicana
ENSCJAG00000038886	-	64	68.914	ENSPMEG00000007320	rbfox2	100	68.914	Poecilia_mexicana
ENSCJAG00000038886	-	64	68.421	ENSPREG00000012955	rbfox2	100	68.421	Poecilia_reticulata
ENSCJAG00000038886	-	96	96.825	ENSPPYG00000011766	RBFOX2	84	96.825	Pongo_abelii
ENSCJAG00000038886	-	73	100.000	ENSPCAG00000016806	RBFOX2	76	100.000	Procavia_capensis
ENSCJAG00000038886	-	95	94.005	ENSPCOG00000016273	RBFOX2	98	94.005	Propithecus_coquereli
ENSCJAG00000038886	-	63	96.371	ENSPVAG00000015844	RBFOX2	66	96.371	Pteropus_vampyrus
ENSCJAG00000038886	-	70	71.379	ENSPNYG00000016161	rbfox2	72	61.918	Pundamilia_nyererei
ENSCJAG00000038886	-	88	59.783	ENSPNYG00000020595	-	82	62.264	Pundamilia_nyererei
ENSCJAG00000038886	-	88	54.396	ENSPNAG00000000168	rbfox2	70	55.220	Pygocentrus_nattereri
ENSCJAG00000038886	-	80	65.432	ENSPNAG00000014196	-	69	65.123	Pygocentrus_nattereri
ENSCJAG00000038886	-	95	96.515	ENSRNOG00000004688	Rbfox2	93	94.865	Rattus_norvegicus
ENSCJAG00000038886	-	96	98.930	ENSRBIG00000033696	RBFOX2	99	98.930	Rhinopithecus_bieti
ENSCJAG00000038886	-	96	98.930	ENSRROG00000035715	RBFOX2	99	98.930	Rhinopithecus_roxellana
ENSCJAG00000038886	-	96	99.198	ENSSBOG00000028291	RBFOX2	99	99.198	Saimiri_boliviensis_boliviensis
ENSCJAG00000038886	-	97	95.225	ENSSHAG00000006835	RBFOX2	96	95.225	Sarcophilus_harrisii
ENSCJAG00000038886	-	88	65.014	ENSSFOG00015010482	-	90	63.187	Scleropages_formosus
ENSCJAG00000038886	-	58	56.780	ENSSFOG00015013291	-	64	63.317	Scleropages_formosus
ENSCJAG00000038886	-	70	66.333	ENSSMAG00000004317	-	81	58.445	Scophthalmus_maximus
ENSCJAG00000038886	-	70	71.181	ENSSMAG00000013662	rbfox2	66	64.759	Scophthalmus_maximus
ENSCJAG00000038886	-	70	71.626	ENSSDUG00000004292	rbfox2	72	60.870	Seriola_dumerili
ENSCJAG00000038886	-	88	58.743	ENSSDUG00000009511	-	72	62.060	Seriola_dumerili
ENSCJAG00000038886	-	71	67.230	ENSSLDG00000018052	-	72	62.060	Seriola_lalandi_dorsalis
ENSCJAG00000038886	-	52	67.727	ENSSLDG00000023983	rbfox2	56	55.518	Seriola_lalandi_dorsalis
ENSCJAG00000038886	-	62	97.727	ENSSARG00000001081	-	62	97.727	Sorex_araneus
ENSCJAG00000038886	-	67	95.802	ENSSPUG00000011797	RBFOX2	78	96.014	Sphenodon_punctatus
ENSCJAG00000038886	-	70	71.875	ENSSPAG00000013681	rbfox2	72	61.035	Stegastes_partitus
ENSCJAG00000038886	-	71	67.003	ENSSPAG00000016272	-	72	61.789	Stegastes_partitus
ENSCJAG00000038886	-	96	98.128	ENSSSCG00000000152	RBFOX2	99	98.128	Sus_scrofa
ENSCJAG00000038886	-	95	96.477	ENSTGUG00000010808	RBFOX2	100	96.477	Taeniopygia_guttata
ENSCJAG00000038886	-	95	57.784	ENSTRUG00000007739	-	96	56.992	Takifugu_rubripes
ENSCJAG00000038886	-	63	99.145	ENSTBEG00000003297	-	63	99.145	Tupaia_belangeri
ENSCJAG00000038886	-	96	96.296	ENSTTRG00000006922	RBFOX2	99	97.568	Tursiops_truncatus
ENSCJAG00000038886	-	93	96.995	ENSUAMG00000010612	RBFOX2	95	96.995	Ursus_americanus
ENSCJAG00000038886	-	78	98.689	ENSUMAG00000016785	RBFOX2	81	96.610	Ursus_maritimus
ENSCJAG00000038886	-	96	90.212	ENSVPAG00000002824	RBFOX2	99	91.351	Vicugna_pacos
ENSCJAG00000038886	-	96	98.123	ENSVVUG00000023561	RBFOX2	99	97.067	Vulpes_vulpes
ENSCJAG00000038886	-	96	82.713	ENSXETG00000000231	rbfox2	100	82.713	Xenopus_tropicalis
ENSCJAG00000038886	-	59	61.290	ENSXCOG00000013643	rbfox2	100	61.290	Xiphophorus_couchianus
ENSCJAG00000038886	-	66	83.721	ENSXCOG00000015905	-	60	63.684	Xiphophorus_couchianus
ENSCJAG00000038886	-	70	71.134	ENSXMAG00000029498	rbfox2	83	61.186	Xiphophorus_maculatus
ENSCJAG00000038886	-	88	60.541	ENSXMAG00000026769	-	73	61.394	Xiphophorus_maculatus