EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000039083 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 4495 bases
Position: chrNTIC01022223.1:116068198-116072692
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000054411	RRM_1	PF00076.22	4.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000076476	-	918	-	ENSCJAP00000054411	305 (aa)	-	A0A2R8M692

Gene Model

Click here to download ENSCJAG00000039083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000039083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000039083	-	93	64.220	ENSCJAG00000004422	CSTF2	66	62.422
ENSCJAG00000039083	-	93	91.438	ENSCJAG00000011554	-	97	91.781

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000039083	-	93	79.939	ENSG00000177613	CSTF2T	53	80.243	Homo_sapiens
ENSCJAG00000039083	-	93	75.229	ENSAMEG00000015766	CSTF2T	53	74.468	Ailuropoda_melanoleuca
ENSCJAG00000039083	-	93	91.497	ENSANAG00000027508	-	89	91.497	Aotus_nancymaae
ENSCJAG00000039083	-	93	75.841	ENSBTAG00000018406	CSTF2T	51	78.593	Bos_taurus
ENSCJAG00000039083	-	93	56.881	ENSCAFG00000015567	CSTF2T	58	72.959	Canis_familiaris
ENSCJAG00000039083	-	93	66.765	ENSCAFG00020026426	CSTF2T	53	68.129	Canis_lupus_dingo
ENSCJAG00000039083	-	93	75.535	ENSCHIG00000016590	CSTF2T	52	78.287	Capra_hircus
ENSCJAG00000039083	-	95	87.667	ENSTSYG00000007750	CSTF2T	98	87.333	Carlito_syrichta
ENSCJAG00000039083	-	93	72.472	ENSCPOG00000004195	CSTF2T	57	72.159	Cavia_porcellus
ENSCJAG00000039083	-	93	89.527	ENSCCAG00000020816	-	88	91.554	Cebus_capucinus
ENSCJAG00000039083	-	93	90.203	ENSCATG00000041868	-	96	89.933	Cercocebus_atys
ENSCJAG00000039083	-	93	71.955	ENSCLAG00000017916	CSTF2T	55	71.955	Chinchilla_lanigera
ENSCJAG00000039083	-	93	79.580	ENSCSAG00000018437	CSTF2T	54	79.880	Chlorocebus_sabaeus
ENSCJAG00000039083	-	91	87.629	ENSCANG00000005843	-	92	90.034	Colobus_angolensis_palliatus
ENSCJAG00000039083	-	93	73.235	ENSCGRG00001003222	Cstf2t	53	73.235	Cricetulus_griseus_chok1gshd
ENSCJAG00000039083	-	93	73.235	ENSCGRG00000008682	Cstf2t	54	73.235	Cricetulus_griseus_crigri
ENSCJAG00000039083	-	69	61.446	ENSCSEG00000002596	-	68	53.916	Cynoglossus_semilaevis
ENSCJAG00000039083	-	93	77.134	ENSDNOG00000003283	CSTF2T	53	77.744	Dasypus_novemcinctus
ENSCJAG00000039083	-	93	78.248	ENSDORG00000011245	Cstf2t	53	77.039	Dipodomys_ordii
ENSCJAG00000039083	-	93	78.287	ENSEASG00005012929	CSTF2T	53	78.287	Equus_asinus_asinus
ENSCJAG00000039083	-	93	78.287	ENSECAG00000004701	CSTF2T	52	78.287	Equus_caballus
ENSCJAG00000039083	-	51	69.744	ENSELUG00000004079	-	62	54.518	Esox_lucius
ENSCJAG00000039083	-	93	79.205	ENSFCAG00000046300	CSTF2T	53	79.205	Felis_catus
ENSCJAG00000039083	-	93	75.942	ENSFDAG00000021170	CSTF2T	53	76.522	Fukomys_damarensis
ENSCJAG00000039083	-	91	89.691	ENSGGOG00000042388	-	96	89.691	Gorilla_gorilla
ENSCJAG00000039083	-	91	89.691	ENSGGOG00000036416	-	96	89.691	Gorilla_gorilla
ENSCJAG00000039083	-	93	74.063	ENSHGLG00000015478	CSTF2T	54	72.046	Heterocephalus_glaber_female
ENSCJAG00000039083	-	93	74.063	ENSHGLG00100000336	CSTF2T	54	72.046	Heterocephalus_glaber_male
ENSCJAG00000039083	-	93	74.854	ENSSTOG00000026303	CSTF2T	55	75.953	Ictidomys_tridecemlineatus
ENSCJAG00000039083	-	55	76.214	ENSJJAG00000019881	Cstf2t	52	61.162	Jaculus_jaculus
ENSCJAG00000039083	-	93	77.676	ENSLAFG00000002058	CSTF2T	57	77.370	Loxodonta_africana
ENSCJAG00000039083	-	90	90.559	ENSMFAG00000042009	-	97	90.244	Macaca_fascicularis
ENSCJAG00000039083	-	93	90.816	ENSMMUG00000042906	-	99	90.816	Macaca_mulatta
ENSCJAG00000039083	-	90	90.559	ENSMNEG00000031410	-	97	90.244	Macaca_nemestrina
ENSCJAG00000039083	-	93	74.118	ENSMAUG00000006359	Cstf2t	55	72.353	Mesocricetus_auratus
ENSCJAG00000039083	-	93	88.255	ENSMICG00000000867	-	80	88.255	Microcebus_murinus
ENSCJAG00000039083	-	94	85.479	ENSMICG00000030551	-	80	85.479	Microcebus_murinus
ENSCJAG00000039083	-	93	73.900	ENSMOCG00000020428	Cstf2t	54	73.607	Microtus_ochrogaster
ENSCJAG00000039083	-	69	61.847	ENSMALG00000008842	-	61	53.172	Monopterus_albus
ENSCJAG00000039083	-	93	73.529	MGP_CAROLIEiJ_G0022872	Cstf2t	54	72.353	Mus_caroli
ENSCJAG00000039083	-	93	73.529	ENSMUSG00000053536	Cstf2t	54	73.529	Mus_musculus
ENSCJAG00000039083	-	93	71.470	MGP_PahariEiJ_G0014365	Cstf2t	54	71.470	Mus_pahari
ENSCJAG00000039083	-	93	73.235	MGP_SPRETEiJ_G0023790	Cstf2t	53	73.235	Mus_spretus
ENSCJAG00000039083	-	93	77.177	ENSMPUG00000020141	CSTF2T	55	77.477	Mustela_putorius_furo
ENSCJAG00000039083	-	93	77.064	ENSMLUG00000011187	-	51	77.064	Myotis_lucifugus
ENSCJAG00000039083	-	93	71.903	ENSMLUG00000027140	-	55	70.091	Myotis_lucifugus
ENSCJAG00000039083	-	93	75.073	ENSNGAG00000003304	Cstf2t	55	74.780	Nannospalax_galili
ENSCJAG00000039083	-	93	73.952	ENSNLEG00000012025	CSTF2T	54	73.952	Nomascus_leucogenys
ENSCJAG00000039083	-	95	70.889	ENSODEG00000012386	CSTF2T	62	67.655	Octodon_degus
ENSCJAG00000039083	-	93	75.841	ENSOCUG00000004647	-	58	75.841	Oryctolagus_cuniculus
ENSCJAG00000039083	-	93	79.817	ENSOGAG00000014565	CSTF2T	54	79.511	Otolemur_garnettii
ENSCJAG00000039083	-	93	75.535	ENSOARG00000019124	-	52	78.287	Ovis_aries
ENSCJAG00000039083	-	93	75.535	ENSOARG00000013688	-	51	78.287	Ovis_aries
ENSCJAG00000039083	-	91	89.965	ENSPPAG00000032242	-	96	89.965	Pan_paniscus
ENSCJAG00000039083	-	93	78.593	ENSPPRG00000018659	CSTF2T	53	78.287	Panthera_pardus
ENSCJAG00000039083	-	93	75.535	ENSPTIG00000021145	CSTF2T	54	75.535	Panthera_tigris_altaica
ENSCJAG00000039083	-	91	89.965	ENSPTRG00000043097	-	96	89.965	Pan_troglodytes
ENSCJAG00000039083	-	90	90.559	ENSPANG00000029734	-	97	90.244	Papio_anubis
ENSCJAG00000039083	-	51	70.256	ENSPFOG00000016756	CSTF2T	98	51.906	Poecilia_formosa
ENSCJAG00000039083	-	93	78.979	ENSPPYG00000002441	CSTF2T	53	79.279	Pongo_abelii
ENSCJAG00000039083	-	93	76.133	ENSPCAG00000000046	CSTF2T	54	77.341	Procavia_capensis
ENSCJAG00000039083	-	93	80.428	ENSPCOG00000010982	CSTF2T	54	80.428	Propithecus_coquereli
ENSCJAG00000039083	-	93	80.122	ENSPVAG00000006274	CSTF2T	54	79.205	Pteropus_vampyrus
ENSCJAG00000039083	-	93	73.900	ENSRNOG00000050289	Cstf2t	54	71.848	Rattus_norvegicus
ENSCJAG00000039083	-	91	89.347	ENSRBIG00000029324	CSTF2T	96	89.347	Rhinopithecus_bieti
ENSCJAG00000039083	-	91	89.691	ENSRROG00000042507	CSTF2T	96	89.691	Rhinopithecus_roxellana
ENSCJAG00000039083	-	93	88.591	ENSSBOG00000022638	CSTF2T	93	90.940	Saimiri_boliviensis_boliviensis
ENSCJAG00000039083	-	51	70.769	ENSSDUG00000001049	-	62	52.367	Seriola_dumerili
ENSCJAG00000039083	-	51	70.769	ENSSLDG00000010056	-	62	52.367	Seriola_lalandi_dorsalis
ENSCJAG00000039083	-	69	61.044	ENSSPAG00000009247	-	58	55.892	Stegastes_partitus
ENSCJAG00000039083	-	93	79.027	ENSSSCG00000010430	CSTF2T	53	79.027	Sus_scrofa
ENSCJAG00000039083	-	71	60.156	ENSTRUG00000004323	-	57	54.037	Takifugu_rubripes
ENSCJAG00000039083	-	93	78.287	ENSTTRG00000003341	CSTF2T	53	77.982	Tursiops_truncatus
ENSCJAG00000039083	-	93	78.593	ENSUMAG00000011141	CSTF2T	51	78.593	Ursus_maritimus
ENSCJAG00000039083	-	53	73.134	ENSVVUG00000002575	CSTF2T	66	59.801	Vulpes_vulpes