EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000039713 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 2376 bases
Position: chrNTIC01035287.1:254-2629
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000058788	LSM	PF01423.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000086102	-	249	-	ENSCJAP00000058788	82 (aa)	-	A0A2R8MFD5

Gene Model

Click here to download ENSCJAG00000039713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000039713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000039713	-	62	42.308	ENSCJAG00000019313	SNRPG	57	46.154
ENSCJAG00000039713	-	56	47.826	ENSCJAG00000019624	-	60	47.826
ENSCJAG00000039713	-	71	38.983	ENSCJAG00000022419	-	79	38.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000039713	-	68	100.000	ENSG00000130332	LSM7	94	96.970	Homo_sapiens
ENSCJAG00000039713	-	66	94.444	ENSAPOG00000015573	lsm7	59	76.812	Acanthochromis_polyacanthus
ENSCJAG00000039713	-	68	94.643	ENSAMEG00000005484	LSM7	54	94.643	Ailuropoda_melanoleuca
ENSCJAG00000039713	-	85	75.714	ENSACIG00000006498	lsm7	56	75.714	Amphilophus_citrinellus
ENSCJAG00000039713	-	66	94.444	ENSAOCG00000001077	lsm7	63	76.812	Amphiprion_ocellaris
ENSCJAG00000039713	-	87	74.648	ENSAPEG00000024447	lsm7	63	76.812	Amphiprion_percula
ENSCJAG00000039713	-	87	77.465	ENSAPEG00000000694	lsm7	69	77.465	Amphiprion_percula
ENSCJAG00000039713	-	87	77.465	ENSATEG00000008557	lsm7	69	77.465	Anabas_testudineus
ENSCJAG00000039713	-	68	100.000	ENSANAG00000037196	-	54	100.000	Aotus_nancymaae
ENSCJAG00000039713	-	60	97.959	ENSANAG00000022222	-	51	97.959	Aotus_nancymaae
ENSCJAG00000039713	-	87	76.056	ENSACLG00000021021	lsm7	69	76.056	Astatotilapia_calliptera
ENSCJAG00000039713	-	68	94.643	ENSAMXG00000037622	lsm7	54	94.643	Astyanax_mexicanus
ENSCJAG00000039713	-	68	100.000	ENSBTAG00000004521	LSM7	54	100.000	Bos_taurus
ENSCJAG00000039713	-	66	66.667	WBGene00003081	lsm-7	52	66.667	Caenorhabditis_elegans
ENSCJAG00000039713	-	66	98.148	ENSCAFG00000019409	LSM7	52	98.148	Canis_familiaris
ENSCJAG00000039713	-	68	96.429	ENSCHIG00000023663	LSM7	54	96.429	Capra_hircus
ENSCJAG00000039713	-	68	100.000	ENSCPOG00000014025	LSM7	54	100.000	Cavia_porcellus
ENSCJAG00000039713	-	66	100.000	ENSCCAG00000035456	LSM7	53	100.000	Cebus_capucinus
ENSCJAG00000039713	-	68	100.000	ENSCATG00000023543	LSM7	54	100.000	Cercocebus_atys
ENSCJAG00000039713	-	68	100.000	ENSCLAG00000011635	LSM7	54	100.000	Chinchilla_lanigera
ENSCJAG00000039713	-	68	100.000	ENSCSAG00000011599	LSM7	54	100.000	Chlorocebus_sabaeus
ENSCJAG00000039713	-	63	78.846	ENSCING00000022134	-	53	78.846	Ciona_intestinalis
ENSCJAG00000039713	-	68	100.000	ENSCANG00000035525	LSM7	54	100.000	Colobus_angolensis_palliatus
ENSCJAG00000039713	-	68	100.000	ENSCGRG00001000807	-	54	100.000	Cricetulus_griseus_chok1gshd
ENSCJAG00000039713	-	66	90.741	ENSCGRG00001016005	-	56	90.741	Cricetulus_griseus_chok1gshd
ENSCJAG00000039713	-	66	100.000	ENSCGRG00000014355	-	52	100.000	Cricetulus_griseus_crigri
ENSCJAG00000039713	-	66	90.741	ENSCGRG00000006821	-	56	90.741	Cricetulus_griseus_crigri
ENSCJAG00000039713	-	66	94.444	ENSCSEG00000014900	lsm7	58	76.812	Cynoglossus_semilaevis
ENSCJAG00000039713	-	66	96.296	ENSCVAG00000021091	lsm7	50	96.296	Cyprinodon_variegatus
ENSCJAG00000039713	-	68	92.857	ENSDARG00000058328	lsm7	54	92.857	Danio_rerio
ENSCJAG00000039713	-	67	98.182	ENSDORG00000024460	Lsm7	54	98.182	Dipodomys_ordii
ENSCJAG00000039713	-	66	96.296	ENSETEG00000012788	LSM7	53	96.296	Echinops_telfairi
ENSCJAG00000039713	-	68	83.929	ENSEBUG00000016992	lsm7	54	83.929	Eptatretus_burgeri
ENSCJAG00000039713	-	68	98.214	ENSFCAG00000003445	LSM7	54	98.214	Felis_catus
ENSCJAG00000039713	-	66	98.148	ENSFALG00000011912	LSM7	53	98.148	Ficedula_albicollis
ENSCJAG00000039713	-	60	100.000	ENSFDAG00000007661	LSM7	51	100.000	Fukomys_damarensis
ENSCJAG00000039713	-	84	78.261	ENSFHEG00000006349	lsm7	62	78.261	Fundulus_heteroclitus
ENSCJAG00000039713	-	87	74.648	ENSGMOG00000013320	lsm7	69	74.648	Gadus_morhua
ENSCJAG00000039713	-	87	78.873	ENSGAFG00000013902	lsm7	69	78.873	Gambusia_affinis
ENSCJAG00000039713	-	87	74.648	ENSGACG00000010390	lsm7	69	74.648	Gasterosteus_aculeatus
ENSCJAG00000039713	-	68	100.000	ENSGGOG00000010172	LSM7	54	100.000	Gorilla_gorilla
ENSCJAG00000039713	-	87	76.056	ENSHBUG00000004616	lsm7	69	76.056	Haplochromis_burtoni
ENSCJAG00000039713	-	68	100.000	ENSHGLG00000010587	LSM7	54	100.000	Heterocephalus_glaber_female
ENSCJAG00000039713	-	68	100.000	ENSHGLG00100000852	LSM7	54	100.000	Heterocephalus_glaber_male
ENSCJAG00000039713	-	84	75.362	ENSHCOG00000020252	lsm7	68	75.362	Hippocampus_comes
ENSCJAG00000039713	-	68	96.429	ENSIPUG00000024724	lsm7	54	96.429	Ictalurus_punctatus
ENSCJAG00000039713	-	66	100.000	ENSSTOG00000028372	LSM7	53	100.000	Ictidomys_tridecemlineatus
ENSCJAG00000039713	-	66	100.000	ENSJJAG00000001936	Lsm7	52	100.000	Jaculus_jaculus
ENSCJAG00000039713	-	87	78.873	ENSKMAG00000022151	lsm7	69	78.873	Kryptolebias_marmoratus
ENSCJAG00000039713	-	87	76.056	ENSLBEG00000005203	lsm7	69	76.056	Labrus_bergylta
ENSCJAG00000039713	-	68	96.429	ENSLACG00000015700	LSM7	54	96.429	Latimeria_chalumnae
ENSCJAG00000039713	-	68	94.643	ENSLOCG00000004356	lsm7	54	94.643	Lepisosteus_oculatus
ENSCJAG00000039713	-	66	100.000	ENSLAFG00000029302	LSM7	52	100.000	Loxodonta_africana
ENSCJAG00000039713	-	68	100.000	ENSMFAG00000044572	LSM7	54	100.000	Macaca_fascicularis
ENSCJAG00000039713	-	68	100.000	ENSMMUG00000000452	LSM7	54	100.000	Macaca_mulatta
ENSCJAG00000039713	-	68	100.000	ENSMNEG00000004393	LSM7	54	100.000	Macaca_nemestrina
ENSCJAG00000039713	-	68	100.000	ENSMLEG00000030852	LSM7	54	100.000	Mandrillus_leucophaeus
ENSCJAG00000039713	-	87	76.056	ENSMAMG00000005410	lsm7	69	76.056	Mastacembelus_armatus
ENSCJAG00000039713	-	87	76.056	ENSMZEG00005028055	lsm7	69	76.056	Maylandia_zebra
ENSCJAG00000039713	-	68	100.000	ENSMAUG00000009276	Lsm7	54	100.000	Mesocricetus_auratus
ENSCJAG00000039713	-	68	98.214	ENSMICG00000009988	-	54	98.214	Microcebus_murinus
ENSCJAG00000039713	-	68	100.000	ENSMICG00000028619	-	54	100.000	Microcebus_murinus
ENSCJAG00000039713	-	68	100.000	ENSMOCG00000016925	Lsm7	54	100.000	Microtus_ochrogaster
ENSCJAG00000039713	-	68	94.643	ENSMMOG00000019645	lsm7	53	94.643	Mola_mola
ENSCJAG00000039713	-	68	100.000	ENSMODG00000004722	LSM7	54	100.000	Monodelphis_domestica
ENSCJAG00000039713	-	68	98.214	MGP_CAROLIEiJ_G0015607	Lsm7	54	98.214	Mus_caroli
ENSCJAG00000039713	-	76	95.161	ENSMUSG00000035215	Lsm7	79	95.161	Mus_musculus
ENSCJAG00000039713	-	68	98.214	MGP_PahariEiJ_G0031020	Lsm7	54	98.214	Mus_pahari
ENSCJAG00000039713	-	68	98.214	MGP_SPRETEiJ_G0016425	Lsm7	54	98.214	Mus_spretus
ENSCJAG00000039713	-	68	96.429	ENSMLUG00000013097	-	54	96.429	Myotis_lucifugus
ENSCJAG00000039713	-	68	92.857	ENSMLUG00000024002	-	51	92.857	Myotis_lucifugus
ENSCJAG00000039713	-	68	98.214	ENSNGAG00000021637	Lsm7	54	98.214	Nannospalax_galili
ENSCJAG00000039713	-	68	100.000	ENSNLEG00000002265	LSM7	54	100.000	Nomascus_leucogenys
ENSCJAG00000039713	-	90	58.108	ENSODEG00000008190	-	69	58.108	Octodon_degus
ENSCJAG00000039713	-	68	100.000	ENSODEG00000013590	-	54	100.000	Octodon_degus
ENSCJAG00000039713	-	68	91.071	ENSODEG00000018769	-	54	91.071	Octodon_degus
ENSCJAG00000039713	-	87	77.465	ENSORLG00000023951	lsm7	69	77.465	Oryzias_latipes
ENSCJAG00000039713	-	87	77.465	ENSORLG00020022226	lsm7	69	77.465	Oryzias_latipes_hni
ENSCJAG00000039713	-	68	91.071	ENSORLG00015020044	lsm7	64	76.812	Oryzias_latipes_hsok
ENSCJAG00000039713	-	87	77.465	ENSOMEG00000012806	lsm7	69	77.465	Oryzias_melastigma
ENSCJAG00000039713	-	87	76.056	ENSOGAG00000024373	-	69	76.056	Otolemur_garnettii
ENSCJAG00000039713	-	66	100.000	ENSOGAG00000000144	-	53	100.000	Otolemur_garnettii
ENSCJAG00000039713	-	68	96.429	ENSOARG00000014013	LSM7	54	96.429	Ovis_aries
ENSCJAG00000039713	-	68	100.000	ENSPPAG00000026500	LSM7	54	100.000	Pan_paniscus
ENSCJAG00000039713	-	68	98.214	ENSPPRG00000008624	LSM7	54	98.214	Panthera_pardus
ENSCJAG00000039713	-	66	98.148	ENSPTIG00000016252	LSM7	52	98.148	Panthera_tigris_altaica
ENSCJAG00000039713	-	68	100.000	ENSPTRG00000010233	LSM7	54	100.000	Pan_troglodytes
ENSCJAG00000039713	-	68	100.000	ENSPANG00000020668	LSM7	54	100.000	Papio_anubis
ENSCJAG00000039713	-	68	96.429	ENSPKIG00000011325	lsm7	54	96.429	Paramormyrops_kingsleyae
ENSCJAG00000039713	-	87	77.465	ENSPMGG00000006498	lsm7	69	77.465	Periophthalmus_magnuspinnatus
ENSCJAG00000039713	-	68	100.000	ENSPCIG00000030454	LSM7	54	100.000	Phascolarctos_cinereus
ENSCJAG00000039713	-	87	76.056	ENSPFOG00000012467	lsm7	63	76.056	Poecilia_formosa
ENSCJAG00000039713	-	87	76.056	ENSPLAG00000000252	lsm7	51	94.545	Poecilia_latipinna
ENSCJAG00000039713	-	87	76.056	ENSPMEG00000000587	lsm7	51	94.545	Poecilia_mexicana
ENSCJAG00000039713	-	94	69.663	ENSPREG00000016718	lsm7	71	69.663	Poecilia_reticulata
ENSCJAG00000039713	-	68	100.000	ENSPCOG00000017177	LSM7	54	100.000	Propithecus_coquereli
ENSCJAG00000039713	-	87	76.056	ENSPNYG00000006938	lsm7	69	76.056	Pundamilia_nyererei
ENSCJAG00000039713	-	68	94.643	ENSPNAG00000010141	lsm7	54	94.643	Pygocentrus_nattereri
ENSCJAG00000039713	-	68	100.000	ENSRNOG00000019552	Lsm7	54	100.000	Rattus_norvegicus
ENSCJAG00000039713	-	68	100.000	ENSRBIG00000035978	LSM7	54	100.000	Rhinopithecus_bieti
ENSCJAG00000039713	-	68	100.000	ENSRROG00000034044	LSM7	54	100.000	Rhinopithecus_roxellana
ENSCJAG00000039713	-	68	100.000	ENSSBOG00000034899	LSM7	54	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000039713	-	68	94.643	ENSSFOG00015006728	lsm7	54	94.643	Scleropages_formosus
ENSCJAG00000039713	-	87	74.648	ENSSMAG00000004195	lsm7	50	94.444	Scophthalmus_maximus
ENSCJAG00000039713	-	95	74.359	ENSSDUG00000001863	lsm7	78	74.359	Seriola_dumerili
ENSCJAG00000039713	-	87	77.465	ENSSLDG00000016339	lsm7	69	77.465	Seriola_lalandi_dorsalis
ENSCJAG00000039713	-	87	77.465	ENSSPAG00000015221	lsm7	69	77.465	Stegastes_partitus
ENSCJAG00000039713	-	66	100.000	ENSSSCG00000013463	LSM7	53	100.000	Sus_scrofa
ENSCJAG00000039713	-	66	98.148	ENSTGUG00000000067	LSM7	53	98.148	Taeniopygia_guttata
ENSCJAG00000039713	-	68	94.643	ENSTRUG00000022913	lsm7	54	94.643	Takifugu_rubripes
ENSCJAG00000039713	-	68	94.643	ENSTNIG00000015525	lsm7	54	94.643	Tetraodon_nigroviridis
ENSCJAG00000039713	-	66	96.296	ENSXETG00000022166	lsm7	53	96.296	Xenopus_tropicalis
ENSCJAG00000039713	-	67	94.545	ENSXCOG00000002572	lsm7	69	77.143	Xiphophorus_couchianus
ENSCJAG00000039713	-	87	78.873	ENSXMAG00000018630	lsm7	69	78.873	Xiphophorus_maculatus