EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000039915 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 3682 bases
Position: chrNTIC01001113.1:40728712-40732393
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000066676	zf-U11-48K	PF05253.12	9e-20	1	2
ENSCJAP00000066676	zf-U11-48K	PF05253.12	9e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000071573	-	549	-	ENSCJAP00000066676	182 (aa)	-	A0A2R8PLZ0

Gene Model

Click here to download ENSCJAG00000039915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000039915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000039915	-	88	94.012	ENSCJAG00000018968	-	100	94.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000039915	-	88	92.216	ENSG00000170627	GTSF1	100	92.216	Homo_sapiens
ENSCJAG00000039915	-	77	45.578	ENSAPOG00000022724	-	95	45.578	Acanthochromis_polyacanthus
ENSCJAG00000039915	-	87	86.667	ENSAMEG00000000939	GTSF1	98	86.667	Ailuropoda_melanoleuca
ENSCJAG00000039915	-	77	44.898	ENSAOCG00000022214	-	74	42.767	Amphiprion_ocellaris
ENSCJAG00000039915	-	65	55.556	ENSAPLG00000004814	GTSF1	93	55.556	Anas_platyrhynchos
ENSCJAG00000039915	-	86	58.025	ENSACAG00000014260	-	94	58.025	Anolis_carolinensis
ENSCJAG00000039915	-	60	46.429	ENSACAG00000029590	-	95	46.429	Anolis_carolinensis
ENSCJAG00000039915	-	88	91.617	ENSANAG00000024529	GTSF1	100	91.617	Aotus_nancymaae
ENSCJAG00000039915	-	88	87.425	ENSBTAG00000018085	GTSF1	100	87.425	Bos_taurus
ENSCJAG00000039915	-	88	87.425	ENSCAFG00000006465	-	100	87.425	Canis_familiaris
ENSCJAG00000039915	-	94	87.571	ENSCAFG00020020373	-	95	87.571	Canis_lupus_dingo
ENSCJAG00000039915	-	86	87.117	ENSCHIG00000012215	-	95	87.117	Capra_hircus
ENSCJAG00000039915	-	88	67.066	ENSTSYG00000035266	-	100	67.066	Carlito_syrichta
ENSCJAG00000039915	-	88	83.735	ENSTSYG00000004679	-	100	83.735	Carlito_syrichta
ENSCJAG00000039915	-	88	85.629	ENSCPOG00000008743	GTSF1	100	85.629	Cavia_porcellus
ENSCJAG00000039915	-	85	73.548	ENSCCAG00000032808	GTSF1	100	73.548	Cebus_capucinus
ENSCJAG00000039915	-	88	92.216	ENSCATG00000036328	GTSF1	100	92.216	Cercocebus_atys
ENSCJAG00000039915	-	99	80.645	ENSCLAG00000012811	GTSF1	100	85.629	Chinchilla_lanigera
ENSCJAG00000039915	-	84	90.506	ENSCSAG00000005394	GTSF1	100	90.506	Chlorocebus_sabaeus
ENSCJAG00000039915	-	88	85.629	ENSCHOG00000001659	GTSF1	100	85.629	Choloepus_hoffmanni
ENSCJAG00000039915	-	91	63.584	ENSCPBG00000005134	-	75	63.584	Chrysemys_picta_bellii
ENSCJAG00000039915	-	84	55.000	ENSCPBG00000024905	-	86	55.000	Chrysemys_picta_bellii
ENSCJAG00000039915	-	88	85.629	ENSCANG00000031776	-	100	85.629	Colobus_angolensis_palliatus
ENSCJAG00000039915	-	88	91.018	ENSCANG00000033118	GTSF1	100	91.018	Colobus_angolensis_palliatus
ENSCJAG00000039915	-	88	87.425	ENSCGRG00001013814	Gtsf1	100	87.425	Cricetulus_griseus_chok1gshd
ENSCJAG00000039915	-	88	87.425	ENSCGRG00000007733	Gtsf1	100	87.425	Cricetulus_griseus_crigri
ENSCJAG00000039915	-	83	85.350	ENSDNOG00000001438	-	81	85.350	Dasypus_novemcinctus
ENSCJAG00000039915	-	88	86.826	ENSDORG00000003228	Gtsf1	100	86.826	Dipodomys_ordii
ENSCJAG00000039915	-	88	83.832	ENSETEG00000009310	GTSF1	100	83.832	Echinops_telfairi
ENSCJAG00000039915	-	96	85.635	ENSEASG00005010260	GTSF1	97	85.635	Equus_asinus_asinus
ENSCJAG00000039915	-	88	87.425	ENSECAG00000013618	GTSF1	100	87.425	Equus_caballus
ENSCJAG00000039915	-	88	88.024	ENSEEUG00000005185	GTSF1	100	88.024	Erinaceus_europaeus
ENSCJAG00000039915	-	95	84.831	ENSFCAG00000010156	-	100	87.425	Felis_catus
ENSCJAG00000039915	-	100	64.130	ENSFCAG00000023672	-	100	64.130	Felis_catus
ENSCJAG00000039915	-	65	51.587	ENSFALG00000007613	-	100	51.587	Ficedula_albicollis
ENSCJAG00000039915	-	96	80.000	ENSFDAG00000009383	GTSF1	100	82.635	Fukomys_damarensis
ENSCJAG00000039915	-	85	49.068	ENSGALG00000001109	GTSF1	99	49.068	Gallus_gallus
ENSCJAG00000039915	-	77	48.980	ENSGACG00000010783	-	80	48.980	Gasterosteus_aculeatus
ENSCJAG00000039915	-	88	61.078	ENSGAGG00000011062	GTSF1	86	61.078	Gopherus_agassizii
ENSCJAG00000039915	-	52	51.961	ENSGAGG00000016342	-	95	51.961	Gopherus_agassizii
ENSCJAG00000039915	-	58	47.619	ENSGAGG00000018216	-	89	47.619	Gopherus_agassizii
ENSCJAG00000039915	-	88	92.216	ENSGGOG00000016063	GTSF1	100	92.216	Gorilla_gorilla
ENSCJAG00000039915	-	99	79.570	ENSHGLG00000002436	GTSF1	100	83.832	Heterocephalus_glaber_female
ENSCJAG00000039915	-	99	79.570	ENSHGLG00100017301	GTSF1	100	83.832	Heterocephalus_glaber_male
ENSCJAG00000039915	-	83	48.148	ENSIPUG00000002483	-	84	48.148	Ictalurus_punctatus
ENSCJAG00000039915	-	94	85.876	ENSSTOG00000025170	GTSF1	100	86.826	Ictidomys_tridecemlineatus
ENSCJAG00000039915	-	89	80.952	ENSJJAG00000003323	-	100	81.437	Jaculus_jaculus
ENSCJAG00000039915	-	88	75.449	ENSJJAG00000017442	-	100	75.449	Jaculus_jaculus
ENSCJAG00000039915	-	77	48.966	ENSKMAG00000006038	-	80	48.966	Kryptolebias_marmoratus
ENSCJAG00000039915	-	85	60.000	ENSLACG00000008870	GTSF1	83	60.000	Latimeria_chalumnae
ENSCJAG00000039915	-	86	87.654	ENSLAFG00000016318	GTSF1	97	87.654	Loxodonta_africana
ENSCJAG00000039915	-	88	92.216	ENSMFAG00000041178	GTSF1	100	92.216	Macaca_fascicularis
ENSCJAG00000039915	-	95	91.573	ENSMMUG00000003758	GTSF1	100	92.216	Macaca_mulatta
ENSCJAG00000039915	-	88	92.216	ENSMNEG00000036779	GTSF1	100	92.216	Macaca_nemestrina
ENSCJAG00000039915	-	88	91.617	ENSMLEG00000028375	GTSF1	100	91.617	Mandrillus_leucophaeus
ENSCJAG00000039915	-	64	54.472	ENSMGAG00000000685	GTSF1	87	54.472	Meleagris_gallopavo
ENSCJAG00000039915	-	88	64.072	ENSMAUG00000018746	Gtsf1	99	64.072	Mesocricetus_auratus
ENSCJAG00000039915	-	88	87.425	ENSMICG00000008444	-	100	87.425	Microcebus_murinus
ENSCJAG00000039915	-	88	87.425	ENSMOCG00000018889	Gtsf1	100	87.425	Microtus_ochrogaster
ENSCJAG00000039915	-	88	80.240	ENSMODG00000019422	GTSF1	100	80.240	Monodelphis_domestica
ENSCJAG00000039915	-	99	81.818	MGP_CAROLIEiJ_G0020379	Gtsf1	100	87.425	Mus_caroli
ENSCJAG00000039915	-	100	81.383	ENSMUSG00000022487	Gtsf1	100	87.425	Mus_musculus
ENSCJAG00000039915	-	95	84.270	MGP_PahariEiJ_G0020378	Gtsf1	100	87.425	Mus_pahari
ENSCJAG00000039915	-	100	81.383	MGP_SPRETEiJ_G0021272	Gtsf1	100	87.425	Mus_spretus
ENSCJAG00000039915	-	88	80.240	ENSMPUG00000019140	-	100	80.240	Mustela_putorius_furo
ENSCJAG00000039915	-	88	86.228	ENSMPUG00000019323	-	100	86.228	Mustela_putorius_furo
ENSCJAG00000039915	-	87	87.195	ENSMPUG00000005669	-	98	87.195	Mustela_putorius_furo
ENSCJAG00000039915	-	88	83.832	ENSMLUG00000026557	-	100	83.832	Myotis_lucifugus
ENSCJAG00000039915	-	88	86.228	ENSMLUG00000012961	-	100	86.228	Myotis_lucifugus
ENSCJAG00000039915	-	99	81.183	ENSNGAG00000014213	Gtsf1	100	86.826	Nannospalax_galili
ENSCJAG00000039915	-	88	91.617	ENSNLEG00000017635	GTSF1	100	91.617	Nomascus_leucogenys
ENSCJAG00000039915	-	88	70.060	ENSMEUG00000016206	GTSF1	100	70.060	Notamacropus_eugenii
ENSCJAG00000039915	-	88	66.467	ENSOPRG00000017277	GTSF1	100	66.467	Ochotona_princeps
ENSCJAG00000039915	-	88	85.030	ENSODEG00000014220	GTSF1	100	85.030	Octodon_degus
ENSCJAG00000039915	-	87	61.212	ENSOANG00000011386	GTSF1	99	61.212	Ornithorhynchus_anatinus
ENSCJAG00000039915	-	88	85.629	ENSOCUG00000024495	GTSF1	100	85.629	Oryctolagus_cuniculus
ENSCJAG00000039915	-	63	48.276	ENSORLG00015005017	-	70	49.550	Oryzias_latipes_hsok
ENSCJAG00000039915	-	84	85.535	ENSOGAG00000017227	GTSF1	94	85.535	Otolemur_garnettii
ENSCJAG00000039915	-	88	88.024	ENSOARG00000016162	GTSF1	100	88.024	Ovis_aries
ENSCJAG00000039915	-	88	92.216	ENSPPAG00000028506	GTSF1	100	92.216	Pan_paniscus
ENSCJAG00000039915	-	94	78.531	ENSPPRG00000017612	-	96	78.531	Panthera_pardus
ENSCJAG00000039915	-	88	87.425	ENSPPRG00000004344	-	100	87.425	Panthera_pardus
ENSCJAG00000039915	-	94	79.096	ENSPTIG00000010868	-	96	79.096	Panthera_tigris_altaica
ENSCJAG00000039915	-	88	87.425	ENSPTIG00000020415	-	100	87.425	Panthera_tigris_altaica
ENSCJAG00000039915	-	88	92.216	ENSPTRG00000005041	GTSF1	100	92.216	Pan_troglodytes
ENSCJAG00000039915	-	88	92.216	ENSPANG00000020579	GTSF1	100	92.216	Papio_anubis
ENSCJAG00000039915	-	58	47.458	ENSPSIG00000009839	-	71	47.458	Pelodiscus_sinensis
ENSCJAG00000039915	-	94	60.221	ENSPSIG00000009968	GTSF1	89	60.221	Pelodiscus_sinensis
ENSCJAG00000039915	-	88	87.425	ENSPEMG00000009595	Gtsf1	100	87.425	Peromyscus_maniculatus_bairdii
ENSCJAG00000039915	-	88	76.647	ENSPCIG00000006731	GTSF1	100	76.647	Phascolarctos_cinereus
ENSCJAG00000039915	-	88	92.216	ENSPPYG00000004605	GTSF1	100	92.216	Pongo_abelii
ENSCJAG00000039915	-	88	86.826	ENSPCOG00000016907	-	100	86.826	Propithecus_coquereli
ENSCJAG00000039915	-	87	73.964	ENSPCOG00000015201	-	99	73.964	Propithecus_coquereli
ENSCJAG00000039915	-	88	87.425	ENSPVAG00000000333	GTSF1	100	87.425	Pteropus_vampyrus
ENSCJAG00000039915	-	79	48.684	ENSPNAG00000005737	-	82	48.684	Pygocentrus_nattereri
ENSCJAG00000039915	-	100	81.383	ENSRNOG00000036831	Gtsf1	99	81.383	Rattus_norvegicus
ENSCJAG00000039915	-	94	83.616	ENSRBIG00000039916	-	94	83.616	Rhinopithecus_bieti
ENSCJAG00000039915	-	88	92.216	ENSRBIG00000043438	-	100	92.216	Rhinopithecus_bieti
ENSCJAG00000039915	-	88	92.216	ENSRROG00000008137	GTSF1	100	92.216	Rhinopithecus_roxellana
ENSCJAG00000039915	-	88	94.012	ENSSBOG00000029460	GTSF1	100	94.012	Saimiri_boliviensis_boliviensis
ENSCJAG00000039915	-	88	80.240	ENSSHAG00000011633	GTSF1	100	80.240	Sarcophilus_harrisii
ENSCJAG00000039915	-	68	86.154	ENSSARG00000004928	GTSF1	78	86.154	Sorex_araneus
ENSCJAG00000039915	-	86	50.318	ENSSPUG00000010064	GTSF1	94	69.369	Sphenodon_punctatus
ENSCJAG00000039915	-	88	86.826	ENSSSCG00000026333	GTSF1	100	86.826	Sus_scrofa
ENSCJAG00000039915	-	66	52.344	ENSTGUG00000002008	-	100	52.344	Taeniopygia_guttata
ENSCJAG00000039915	-	85	85.714	ENSTBEG00000006154	GTSF1	100	85.714	Tupaia_belangeri
ENSCJAG00000039915	-	88	85.030	ENSTTRG00000004470	GTSF1	100	85.030	Tursiops_truncatus
ENSCJAG00000039915	-	94	87.006	ENSUAMG00000021669	GTSF1	95	87.006	Ursus_americanus
ENSCJAG00000039915	-	88	88.024	ENSUMAG00000011279	GTSF1	100	88.024	Ursus_maritimus
ENSCJAG00000039915	-	88	85.629	ENSVPAG00000007016	GTSF1	100	85.629	Vicugna_pacos
ENSCJAG00000039915	-	94	87.571	ENSVVUG00000023687	-	89	87.571	Vulpes_vulpes
ENSCJAG00000039915	-	97	57.143	ENSXETG00000033546	gtsf1	81	57.143	Xenopus_tropicalis