EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000039942 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 3443 bases
Position: chrNTIC01034389.1:151850220-151853662
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064668	RRM_1	PF00076.22	1.8e-13	1	1
ENSCJAP00000064908	RRM_1	PF00076.22	8.8e-13	1	1
ENSCJAP00000063712	RRM_1	PF00076.22	1.5e-12	1	1
ENSCJAP00000064668	FYTT	PF07078.11	0.00023	1	1
ENSCJAP00000064908	FYTT	PF07078.11	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000067230	ALYREF-202	765	-	ENSCJAP00000064908	254 (aa)	-	A0A2R8MTV4
ENSCJAT00000074704	ALYREF-203	570	-	ENSCJAP00000063712	189 (aa)	-	A0A2R8MQW3
ENSCJAT00000068960	ALYREF-201	795	-	ENSCJAP00000064668	264 (aa)	-	U3DEP7

Gene Model

Click here to download ENSCJAG00000039942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000039942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000039942	ALYREF	100	98.485	ENSG00000183684	ALYREF	100	98.485	Homo_sapiens
ENSCJAG00000039942	ALYREF	97	67.626	ENSAPOG00000018455	ALYREF	100	70.504	Acanthochromis_polyacanthus
ENSCJAG00000039942	ALYREF	78	85.714	ENSAMEG00000017463	ALYREF	74	90.761	Ailuropoda_melanoleuca
ENSCJAG00000039942	ALYREF	97	74.809	ENSACAG00000010526	ALYREF	100	72.519	Anolis_carolinensis
ENSCJAG00000039942	ALYREF	67	97.175	ENSANAG00000022638	-	75	97.175	Aotus_nancymaae
ENSCJAG00000039942	ALYREF	100	81.818	ENSANAG00000028229	-	80	83.712	Aotus_nancymaae
ENSCJAG00000039942	ALYREF	97	97.276	ENSBTAG00000008498	ALYREF	100	97.276	Bos_taurus
ENSCJAG00000039942	ALYREF	97	96.498	ENSCAFG00000005877	ALYREF	100	96.498	Canis_familiaris
ENSCJAG00000039942	ALYREF	97	96.498	ENSCAFG00020009815	ALYREF	100	96.498	Canis_lupus_dingo
ENSCJAG00000039942	ALYREF	97	96.512	ENSCHIG00000017396	ALYREF	97	96.512	Capra_hircus
ENSCJAG00000039942	ALYREF	85	82.684	ENSTSYG00000002272	ALYREF	69	97.714	Carlito_syrichta
ENSCJAG00000039942	ALYREF	51	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSCJAG00000039942	ALYREF	97	96.498	ENSCPOG00000013710	ALYREF	100	96.498	Cavia_porcellus
ENSCJAG00000039942	ALYREF	93	85.714	ENSCCAG00000030237	-	100	71.984	Cebus_capucinus
ENSCJAG00000039942	ALYREF	100	98.942	ENSCCAG00000020578	-	100	98.942	Cebus_capucinus
ENSCJAG00000039942	ALYREF	100	98.485	ENSCATG00000033169	ALYREF	100	98.485	Cercocebus_atys
ENSCJAG00000039942	ALYREF	97	87.938	ENSCLAG00000015026	ALYREF	100	87.938	Chinchilla_lanigera
ENSCJAG00000039942	ALYREF	100	98.485	ENSCSAG00000002216	ALYREF	100	98.485	Chlorocebus_sabaeus
ENSCJAG00000039942	ALYREF	69	96.133	ENSCANG00000034056	ALYREF	89	88.701	Colobus_angolensis_palliatus
ENSCJAG00000039942	ALYREF	97	93.385	ENSCGRG00001018191	-	100	90.661	Cricetulus_griseus_chok1gshd
ENSCJAG00000039942	ALYREF	72	91.099	ENSCGRG00000015871	-	90	85.484	Cricetulus_griseus_crigri
ENSCJAG00000039942	ALYREF	100	52.284	ENSCSEG00000015438	-	98	54.187	Cynoglossus_semilaevis
ENSCJAG00000039942	ALYREF	67	95.506	ENSDNOG00000002563	ALYREF	75	95.506	Dasypus_novemcinctus
ENSCJAG00000039942	ALYREF	85	82.667	ENSDORG00000025849	-	73	96.111	Dipodomys_ordii
ENSCJAG00000039942	ALYREF	67	93.820	ENSETEG00000016596	ALYREF	100	92.135	Echinops_telfairi
ENSCJAG00000039942	ALYREF	100	96.212	ENSEASG00005005824	ALYREF	98	96.212	Equus_asinus_asinus
ENSCJAG00000039942	ALYREF	100	96.212	ENSECAG00000018754	ALYREF	98	96.212	Equus_caballus
ENSCJAG00000039942	ALYREF	91	97.674	ENSEEUG00000010164	ALYREF	100	97.674	Erinaceus_europaeus
ENSCJAG00000039942	ALYREF	99	96.947	ENSFCAG00000022549	ALYREF	99	96.947	Felis_catus
ENSCJAG00000039942	ALYREF	78	86.893	ENSFDAG00000001213	ALYREF	93	85.437	Fukomys_damarensis
ENSCJAG00000039942	ALYREF	97	83.398	ENSGALG00000007237	ALYREF	100	82.625	Gallus_gallus
ENSCJAG00000039942	ALYREF	97	70.566	ENSGACG00000013328	ALYREF	100	71.321	Gasterosteus_aculeatus
ENSCJAG00000039942	ALYREF	97	82.443	ENSGAGG00000008536	ALYREF	100	81.679	Gopherus_agassizii
ENSCJAG00000039942	ALYREF	100	98.942	ENSGGOG00000013935	ALYREF	100	98.942	Gorilla_gorilla
ENSCJAG00000039942	ALYREF	100	96.825	ENSHGLG00000008293	ALYREF	100	96.825	Heterocephalus_glaber_female
ENSCJAG00000039942	ALYREF	78	80.176	ENSHGLG00100006949	ALYREF	77	93.370	Heterocephalus_glaber_male
ENSCJAG00000039942	ALYREF	97	68.165	ENSHCOG00000015046	ALYREF	100	69.118	Hippocampus_comes
ENSCJAG00000039942	ALYREF	97	93.385	ENSJJAG00000004134	-	100	92.607	Jaculus_jaculus
ENSCJAG00000039942	ALYREF	97	70.455	ENSLACG00000005694	ALYREF	100	70.833	Latimeria_chalumnae
ENSCJAG00000039942	ALYREF	71	94.149	ENSLAFG00000003083	ALYREF	98	91.848	Loxodonta_africana
ENSCJAG00000039942	ALYREF	100	96.212	ENSMFAG00000001394	ALYREF	100	96.212	Macaca_fascicularis
ENSCJAG00000039942	ALYREF	100	98.485	ENSMMUG00000012884	ALYREF	100	98.485	Macaca_mulatta
ENSCJAG00000039942	ALYREF	100	98.485	ENSMNEG00000043666	ALYREF	100	98.485	Macaca_nemestrina
ENSCJAG00000039942	ALYREF	70	88.421	ENSMLEG00000043353	ALYREF	82	88.827	Mandrillus_leucophaeus
ENSCJAG00000039942	ALYREF	97	78.599	ENSMAUG00000020552	-	100	75.486	Mesocricetus_auratus
ENSCJAG00000039942	ALYREF	100	97.884	ENSMICG00000017403	ALYREF	100	97.884	Microcebus_murinus
ENSCJAG00000039942	ALYREF	97	83.462	ENSMOCG00000016792	-	100	80.303	Microtus_ochrogaster
ENSCJAG00000039942	ALYREF	97	92.996	ENSMODG00000003030	ALYREF	84	92.607	Monodelphis_domestica
ENSCJAG00000039942	ALYREF	97	68.727	ENSMALG00000019408	ALYREF	100	69.818	Monopterus_albus
ENSCJAG00000039942	ALYREF	97	73.930	MGP_CAROLIEiJ_G0014874	Alyref2	100	69.261	Mus_caroli
ENSCJAG00000039942	ALYREF	97	95.720	MGP_CAROLIEiJ_G0017529	Alyref	100	95.720	Mus_caroli
ENSCJAG00000039942	ALYREF	91	65.698	ENSMUSG00000112931	Gm4303	62	63.861	Mus_musculus
ENSCJAG00000039942	ALYREF	97	62.105	ENSMUSG00000097550	Gm21304	100	53.521	Mus_musculus
ENSCJAG00000039942	ALYREF	91	65.698	ENSMUSG00000112856	Gm4305	62	63.861	Mus_musculus
ENSCJAG00000039942	ALYREF	97	73.256	ENSMUSG00000060244	Alyref2	100	70.930	Mus_musculus
ENSCJAG00000039942	ALYREF	91	64.535	ENSMUSG00000096640	Gm4312	62	62.376	Mus_musculus
ENSCJAG00000039942	ALYREF	98	61.888	ENSMUSG00000097427	Gm6763	99	59.880	Mus_musculus
ENSCJAG00000039942	ALYREF	97	62.105	ENSMUSG00000091779	Gm21293	100	53.521	Mus_musculus
ENSCJAG00000039942	ALYREF	91	64.535	ENSMUSG00000094314	Gm4301	62	62.376	Mus_musculus
ENSCJAG00000039942	ALYREF	98	61.034	ENSMUSG00000090854	Gm4340	100	51.736	Mus_musculus
ENSCJAG00000039942	ALYREF	97	95.720	ENSMUSG00000025134	Alyref	100	95.720	Mus_musculus
ENSCJAG00000039942	ALYREF	98	61.888	ENSMUSG00000097878	Gm8764	99	59.880	Mus_musculus
ENSCJAG00000039942	ALYREF	91	65.698	ENSMUSG00000091101	Gm4302	61	63.861	Mus_musculus
ENSCJAG00000039942	ALYREF	97	61.278	ENSMUSG00000086727	4931428L18Rik	100	53.788	Mus_musculus
ENSCJAG00000039942	ALYREF	98	61.888	ENSMUSG00000094144	Gm21312	100	53.521	Mus_musculus
ENSCJAG00000039942	ALYREF	98	61.888	ENSMUSG00000095022	Gm20765	100	53.521	Mus_musculus
ENSCJAG00000039942	ALYREF	91	65.698	ENSMUSG00000096744	Gm4307	62	63.861	Mus_musculus
ENSCJAG00000039942	ALYREF	97	60.902	ENSMUSG00000117091	AC153137.1	100	57.197	Mus_musculus
ENSCJAG00000039942	ALYREF	97	95.720	MGP_PahariEiJ_G0018655	-	100	95.720	Mus_pahari
ENSCJAG00000039942	ALYREF	95	92.179	MGP_PahariEiJ_G0018656	-	99	96.825	Mus_pahari
ENSCJAG00000039942	ALYREF	91	64.535	MGP_PahariEiJ_G0027254	-	83	65.366	Mus_pahari
ENSCJAG00000039942	ALYREF	91	64.535	MGP_PahariEiJ_G0027255	-	81	65.366	Mus_pahari
ENSCJAG00000039942	ALYREF	97	95.720	MGP_SPRETEiJ_G0018373	Alyref	100	95.720	Mus_spretus
ENSCJAG00000039942	ALYREF	55	72.115	MGP_SPRETEiJ_G0016590	-	54	77.049	Mus_spretus
ENSCJAG00000039942	ALYREF	97	72.868	MGP_SPRETEiJ_G0015679	Alyref2	100	70.543	Mus_spretus
ENSCJAG00000039942	ALYREF	97	62.295	ENSMLUG00000025677	-	77	60.392	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	95	61.905	ENSMLUG00000024976	-	79	58.498	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	97	60.656	ENSMLUG00000030407	-	77	59.216	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	80	82.710	ENSMLUG00000009555	-	66	92.135	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	97	55.435	ENSMLUG00000015043	-	98	51.737	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	95	61.111	ENSMLUG00000024447	-	76	59.524	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	95	69.444	ENSMLUG00000027516	-	78	65.873	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	82	58.447	ENSMLUG00000028343	-	85	64.045	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	97	61.202	ENSMLUG00000026271	-	79	60.956	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	97	58.696	ENSMLUG00000022869	-	71	61.353	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	90	62.791	ENSMLUG00000023213	-	72	53.476	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	97	56.522	ENSMLUG00000024471	-	82	52.107	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	95	62.698	ENSMLUG00000027352	-	77	59.684	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	97	64.865	ENSMLUG00000002626	-	98	62.791	Myotis_lucifugus
ENSCJAG00000039942	ALYREF	100	98.942	ENSNLEG00000010313	ALYREF	100	98.942	Nomascus_leucogenys
ENSCJAG00000039942	ALYREF	80	73.333	ENSMEUG00000002210	ALYREF	91	73.206	Notamacropus_eugenii
ENSCJAG00000039942	ALYREF	51	91.045	ENSOPRG00000005551	-	52	88.806	Ochotona_princeps
ENSCJAG00000039942	ALYREF	97	95.385	ENSODEG00000008359	ALYREF	100	95.385	Octodon_degus
ENSCJAG00000039942	ALYREF	97	69.091	ENSORLG00000012331	ALYREF	100	70.803	Oryzias_latipes
ENSCJAG00000039942	ALYREF	75	89.394	ENSOGAG00000012409	ALYREF	76	93.333	Otolemur_garnettii
ENSCJAG00000039942	ALYREF	67	97.191	ENSOARG00000017932	ALYREF	67	97.191	Ovis_aries
ENSCJAG00000039942	ALYREF	99	96.947	ENSPPRG00000010829	ALYREF	99	96.947	Panthera_pardus
ENSCJAG00000039942	ALYREF	55	97.241	ENSPTIG00000006399	ALYREF	81	97.241	Panthera_tigris_altaica
ENSCJAG00000039942	ALYREF	100	98.942	ENSPTRG00000009774	ALYREF	100	98.942	Pan_troglodytes
ENSCJAG00000039942	ALYREF	100	98.485	ENSPANG00000019265	ALYREF	100	98.485	Papio_anubis
ENSCJAG00000039942	ALYREF	50	91.729	ENSPSIG00000017541	ALYREF	98	92.481	Pelodiscus_sinensis
ENSCJAG00000039942	ALYREF	100	99.242	ENSPPYG00000008749	ALYREF	100	99.242	Pongo_abelii
ENSCJAG00000039942	ALYREF	100	97.884	ENSPCOG00000020874	ALYREF	100	97.884	Propithecus_coquereli
ENSCJAG00000039942	ALYREF	97	78.988	ENSPVAG00000017866	ALYREF	100	78.988	Pteropus_vampyrus
ENSCJAG00000039942	ALYREF	100	96.825	ENSRNOG00000036687	Alyref	100	96.825	Rattus_norvegicus
ENSCJAG00000039942	ALYREF	69	96.133	ENSRBIG00000039651	ALYREF	74	96.133	Rhinopithecus_bieti
ENSCJAG00000039942	ALYREF	88	90.948	ENSRROG00000045364	ALYREF	81	98.058	Rhinopithecus_roxellana
ENSCJAG00000039942	ALYREF	73	92.746	ENSSHAG00000010459	ALYREF	95	94.565	Sarcophilus_harrisii
ENSCJAG00000039942	ALYREF	97	52.158	ENSSDUG00000003992	-	100	53.025	Seriola_dumerili
ENSCJAG00000039942	ALYREF	97	53.091	ENSSLDG00000005386	-	100	53.597	Seriola_lalandi_dorsalis
ENSCJAG00000039942	ALYREF	97	82.443	ENSSPUG00000004600	ALYREF	100	80.534	Sphenodon_punctatus
ENSCJAG00000039942	ALYREF	97	68.100	ENSSPAG00000011178	ALYREF	97	69.176	Stegastes_partitus
ENSCJAG00000039942	ALYREF	97	96.498	ENSSSCG00000032655	ALYREF	100	96.498	Sus_scrofa
ENSCJAG00000039942	ALYREF	50	93.182	ENSTGUG00000003513	ALYREF	100	91.111	Taeniopygia_guttata
ENSCJAG00000039942	ALYREF	97	69.118	ENSTRUG00000008828	ALYREF	100	68.132	Takifugu_rubripes
ENSCJAG00000039942	ALYREF	67	95.506	ENSTBEG00000005834	ALYREF	100	95.506	Tupaia_belangeri
ENSCJAG00000039942	ALYREF	97	95.331	ENSTTRG00000012275	ALYREF	100	95.331	Tursiops_truncatus
ENSCJAG00000039942	ALYREF	66	86.228	ENSUAMG00000016931	ALYREF	66	83.832	Ursus_americanus
ENSCJAG00000039942	ALYREF	66	88.623	ENSUMAG00000016384	ALYREF	65	86.228	Ursus_maritimus
ENSCJAG00000039942	ALYREF	97	75.581	ENSXETG00000005391	alyref	100	73.745	Xenopus_tropicalis