EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000041780 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 4934 bases
Position: chrNTIC01000002.1:70523079-70528012
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000063170	MMR_HSR1	PF01926.23	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000073940	RAB5B-202	525	-	ENSCJAP00000054964	174 (aa)	-	U3F4J3
ENSCJAT00000068464	RAB5B-201	684	-	ENSCJAP00000063170	227 (aa)	-	A0A2R8MPR4
ENSCJAT00000078674	RAB5B-203	222	-	ENSCJAP00000060237	73 (aa)	-	A0A2R8N5H0

Gene Model

Click here to download ENSCJAG00000041780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000041780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000041780	RAB5B	85	35.323	ENSCJAG00000003347	RAB9B	97	35.323
ENSCJAG00000041780	RAB5B	86	43.689	ENSCJAG00000010778	RAB11B	91	47.531
ENSCJAG00000041780	RAB5B	66	33.333	ENSCJAG00000042173	-	87	34.783
ENSCJAG00000041780	RAB5B	78	39.344	ENSCJAG00000040200	RAB33B	86	38.119
ENSCJAG00000041780	RAB5B	78	37.705	ENSCJAG00000002524	RAB33A	77	37.705
ENSCJAG00000041780	RAB5B	78	45.198	ENSCJAG00000001599	-	87	45.198
ENSCJAG00000041780	RAB5B	66	32.000	ENSCJAG00000039507	-	90	33.333
ENSCJAG00000041780	RAB5B	74	42.442	ENSCJAG00000017521	RAB7A	86	42.604
ENSCJAG00000041780	RAB5B	78	44.633	ENSCJAG00000047933	-	87	44.633
ENSCJAG00000041780	RAB5B	74	35.882	ENSCJAG00000047802	RAB39B	80	35.882
ENSCJAG00000041780	RAB5B	71	44.720	ENSCJAG00000042020	RAB14	75	44.720
ENSCJAG00000041780	RAB5B	95	81.860	ENSCJAG00000048394	RAB5A	100	81.860
ENSCJAG00000041780	RAB5B	70	38.125	ENSCJAG00000010247	RAB23	67	38.125
ENSCJAG00000041780	RAB5B	59	30.282	ENSCJAG00000005865	ARL8A	73	30.282
ENSCJAG00000041780	RAB5B	69	34.375	ENSCJAG00000009762	RAB36	60	34.375
ENSCJAG00000041780	RAB5B	79	30.556	ENSCJAG00000036517	NRAS	93	32.530
ENSCJAG00000041780	RAB5B	75	42.938	ENSCJAG00000045749	RAB18	93	39.691
ENSCJAG00000041780	RAB5B	78	33.333	ENSCJAG00000042669	RHEB	93	33.333
ENSCJAG00000041780	RAB5B	88	35.294	ENSCJAG00000003973	RAB9A	99	35.294
ENSCJAG00000041780	RAB5B	71	40.994	ENSCJAG00000009933	-	95	36.458
ENSCJAG00000041780	RAB5B	71	47.205	ENSCJAG00000042037	RAB11A	75	47.205
ENSCJAG00000041780	RAB5B	73	45.181	ENSCJAG00000039039	RAB6A	80	45.181
ENSCJAG00000041780	RAB5B	81	41.304	ENSCJAG00000008981	RAB2B	85	41.304
ENSCJAG00000041780	RAB5B	85	41.667	ENSCJAG00000007715	RAB25	96	41.584
ENSCJAG00000041780	RAB5B	59	30.986	ENSCJAG00000046554	ARL8B	73	30.986
ENSCJAG00000041780	RAB5B	85	37.949	ENSCJAG00000008955	RAB35	96	37.949
ENSCJAG00000041780	RAB5B	52	38.983	ENSCJAG00000018414	-	51	39.130
ENSCJAG00000041780	RAB5B	72	32.727	ENSCJAG00000044757	KRAS	90	31.579
ENSCJAG00000041780	RAB5B	74	31.395	ENSCJAG00000021602	RERG	84	31.395
ENSCJAG00000041780	RAB5B	78	36.932	ENSCJAG00000019696	RAB15	82	41.837
ENSCJAG00000041780	RAB5B	78	32.787	ENSCJAG00000012199	HRAS	89	32.164
ENSCJAG00000041780	RAB5B	74	42.857	ENSCJAG00000041773	RAB30	83	42.857
ENSCJAG00000041780	RAB5B	85	47.938	ENSCJAG00000044464	RAB22A	98	47.938
ENSCJAG00000041780	RAB5B	85	43.367	ENSCJAG00000046275	RAB1A	98	43.367
ENSCJAG00000041780	RAB5B	81	34.783	ENSCJAG00000015468	RAB12	53	36.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000041780	RAB5B	95	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSCJAG00000041780	RAB5B	95	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSCJAG00000041780	RAB5B	95	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSCJAG00000041780	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	100	100.000	Aotus_nancymaae
ENSCJAG00000041780	RAB5B	95	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSCJAG00000041780	RAB5B	95	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSCJAG00000041780	RAB5B	95	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSCJAG00000041780	RAB5B	92	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSCJAG00000041780	RAB5B	95	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSCJAG00000041780	RAB5B	95	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSCJAG00000041780	RAB5B	95	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSCJAG00000041780	RAB5B	79	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSCJAG00000041780	RAB5B	95	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSCJAG00000041780	RAB5B	95	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSCJAG00000041780	RAB5B	95	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSCJAG00000041780	RAB5B	95	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSCJAG00000041780	RAB5B	95	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSCJAG00000041780	RAB5B	95	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSCJAG00000041780	RAB5B	95	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSCJAG00000041780	RAB5B	95	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSCJAG00000041780	RAB5B	95	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSCJAG00000041780	RAB5B	95	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSCJAG00000041780	RAB5B	95	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSCJAG00000041780	RAB5B	95	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSCJAG00000041780	RAB5B	99	98.684	ENSLAFG00000018009	RAB5B	99	98.684	Loxodonta_africana
ENSCJAG00000041780	RAB5B	95	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSCJAG00000041780	RAB5B	95	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSCJAG00000041780	RAB5B	95	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSCJAG00000041780	RAB5B	95	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSCJAG00000041780	RAB5B	95	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSCJAG00000041780	RAB5B	95	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSCJAG00000041780	RAB5B	95	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSCJAG00000041780	RAB5B	95	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSCJAG00000041780	RAB5B	95	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSCJAG00000041780	RAB5B	99	97.807	ENSMPUG00000000946	RAB5B	93	97.807	Mustela_putorius_furo
ENSCJAG00000041780	RAB5B	95	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSCJAG00000041780	RAB5B	95	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSCJAG00000041780	RAB5B	95	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSCJAG00000041780	RAB5B	100	99.559	ENSOCUG00000013895	RAB5B	100	99.559	Oryctolagus_cuniculus
ENSCJAG00000041780	RAB5B	100	99.559	ENSOARG00000010651	RAB5B	100	99.559	Ovis_aries
ENSCJAG00000041780	RAB5B	95	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSCJAG00000041780	RAB5B	100	99.559	ENSPTRG00000005071	RAB5B	100	99.559	Pan_troglodytes
ENSCJAG00000041780	RAB5B	94	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSCJAG00000041780	RAB5B	95	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSCJAG00000041780	RAB5B	95	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSCJAG00000041780	RAB5B	95	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSCJAG00000041780	RAB5B	95	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSCJAG00000041780	RAB5B	95	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSCJAG00000041780	RAB5B	95	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSCJAG00000041780	RAB5B	95	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSCJAG00000041780	RAB5B	95	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSCJAG00000041780	RAB5B	95	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSCJAG00000041780	RAB5B	95	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSCJAG00000041780	RAB5B	95	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSCJAG00000041780	RAB5B	64	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes