EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000042173 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 552 bases
Position: chrNTIC01035500.1:123948057-123948608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000041250	MMR_HSR1	PF01926.23	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000043642	-	552	-	ENSCJAP00000041250	183 (aa)	-	H9KXT5

Gene Model

Click here to download ENSCJAG00000042173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000042173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000042173	-	87	33.742	ENSCJAG00000047802	RAB39B	71	33.553
ENSCJAG00000042173	-	84	32.468	ENSCJAG00000008955	RAB35	70	31.469
ENSCJAG00000042173	-	84	32.692	ENSCJAG00000040200	RAB33B	63	31.724
ENSCJAG00000042173	-	90	37.870	ENSCJAG00000046275	RAB1A	79	37.342
ENSCJAG00000042173	-	87	32.121	ENSCJAG00000010778	RAB11B	82	30.464
ENSCJAG00000042173	-	84	35.032	ENSCJAG00000019696	RAB15	66	34.177
ENSCJAG00000042173	-	86	33.742	ENSCJAG00000017521	RAB7A	77	31.579
ENSCJAG00000042173	-	93	35.795	ENSCJAG00000047933	-	82	35.152
ENSCJAG00000042173	-	98	43.243	ENSCJAG00000012199	HRAS	97	43.243
ENSCJAG00000042173	-	87	32.919	ENSCJAG00000009933	-	73	32.000
ENSCJAG00000042173	-	80	42.466	ENSCJAG00000021602	RERG	66	42.424
ENSCJAG00000042173	-	90	47.561	ENSCJAG00000044757	KRAS	87	47.561
ENSCJAG00000042173	-	78	36.913	ENSCJAG00000019369	RASL11A	57	34.783
ENSCJAG00000042173	-	85	33.962	ENSCJAG00000041773	RAB30	71	32.432
ENSCJAG00000042173	-	82	41.722	ENSCJAG00000042669	RHEB	76	41.429
ENSCJAG00000042173	-	79	34.932	ENSCJAG00000002524	RAB33A	59	34.286
ENSCJAG00000042173	-	86	36.709	ENSCJAG00000039039	RAB6A	70	35.616
ENSCJAG00000042173	-	87	33.540	ENSCJAG00000048394	RAB5A	69	32.000
ENSCJAG00000042173	-	100	94.536	ENSCJAG00000039507	-	100	94.536
ENSCJAG00000042173	-	93	36.364	ENSCJAG00000001599	-	82	35.758
ENSCJAG00000042173	-	87	34.161	ENSCJAG00000008981	RAB2B	69	33.333
ENSCJAG00000042173	-	80	41.892	ENSCJAG00000044294	MRAS	71	41.892
ENSCJAG00000042173	-	87	34.783	ENSCJAG00000045749	RAB18	72	34.000
ENSCJAG00000042173	-	93	37.714	ENSCJAG00000003973	RAB9A	80	35.366
ENSCJAG00000042173	-	97	32.258	ENSCJAG00000042037	RAB11A	79	30.286
ENSCJAG00000042173	-	87	34.783	ENSCJAG00000041780	RAB5B	66	33.333
ENSCJAG00000042173	-	87	31.677	ENSCJAG00000042020	RAB14	69	30.667
ENSCJAG00000042173	-	92	44.643	ENSCJAG00000036517	NRAS	94	44.643
ENSCJAG00000042173	-	87	38.182	ENSCJAG00000003347	RAB9B	76	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000042173	-	68	84.800	ENSGAGG00000016932	-	96	85.000	Gopherus_agassizii