EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000042216 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 12488 bases
Position: chrNTIC01035500.1:31867635-31880122
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000065802	RNA_pol_Rpb4	PF03874.16	6.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000077896	-	333	-	ENSCJAP00000052955	110 (aa)	-	A0A2R8P135
ENSCJAT00000076470	-	429	-	ENSCJAP00000065802	142 (aa)	-	U3DV70

Gene Model

Click here to download ENSCJAG00000042216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000042216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000042216	-	100	99.296	ENSCJAG00000021814	-	100	99.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000042216	-	100	100.000	ENSG00000144231	POLR2D	100	100.000	Homo_sapiens
ENSCJAG00000042216	-	99	90.071	ENSAPOG00000023553	polr2d	98	90.071	Acanthochromis_polyacanthus
ENSCJAG00000042216	-	100	98.611	ENSAMEG00000011746	POLR2D	100	98.611	Ailuropoda_melanoleuca
ENSCJAG00000042216	-	99	90.071	ENSAOCG00000007295	polr2d	98	90.071	Amphiprion_ocellaris
ENSCJAG00000042216	-	99	90.071	ENSAPEG00000018714	polr2d	98	90.071	Amphiprion_percula
ENSCJAG00000042216	-	100	90.972	ENSATEG00000020416	polr2d	100	90.972	Anabas_testudineus
ENSCJAG00000042216	-	100	96.479	ENSACAG00000005255	POLR2D	100	96.479	Anolis_carolinensis
ENSCJAG00000042216	-	100	100.000	ENSANAG00000019959	POLR2D	100	100.000	Aotus_nancymaae
ENSCJAG00000042216	-	100	90.278	ENSACLG00000009919	polr2d	100	70.139	Astatotilapia_calliptera
ENSCJAG00000042216	-	94	94.737	ENSAMXG00000008954	polr2d	100	90.210	Astyanax_mexicanus
ENSCJAG00000042216	-	100	99.296	ENSBTAG00000053244	POLR2D	100	99.296	Bos_taurus
ENSCJAG00000042216	-	99	57.639	WBGene00018391	rpb-4	100	57.639	Caenorhabditis_elegans
ENSCJAG00000042216	-	100	100.000	ENSCAFG00000004311	POLR2D	100	100.000	Canis_familiaris
ENSCJAG00000042216	-	100	100.000	ENSCAFG00020003617	POLR2D	100	100.000	Canis_lupus_dingo
ENSCJAG00000042216	-	100	98.592	ENSCHIG00000025995	POLR2D	100	98.592	Capra_hircus
ENSCJAG00000042216	-	82	99.145	ENSTSYG00000036021	POLR2D	100	99.145	Carlito_syrichta
ENSCJAG00000042216	-	100	98.592	ENSCPOG00000002571	POLR2D	100	98.592	Cavia_porcellus
ENSCJAG00000042216	-	100	100.000	ENSCCAG00000037709	POLR2D	100	100.000	Cebus_capucinus
ENSCJAG00000042216	-	100	99.296	ENSCATG00000036749	POLR2D	100	99.296	Cercocebus_atys
ENSCJAG00000042216	-	100	99.296	ENSCLAG00000004449	POLR2D	100	99.296	Chinchilla_lanigera
ENSCJAG00000042216	-	100	99.296	ENSCSAG00000016861	POLR2D	100	99.296	Chlorocebus_sabaeus
ENSCJAG00000042216	-	82	100.000	ENSCHOG00000013850	POLR2D	100	100.000	Choloepus_hoffmanni
ENSCJAG00000042216	-	100	95.775	ENSCPBG00000019132	POLR2D	51	95.775	Chrysemys_picta_bellii
ENSCJAG00000042216	-	90	86.719	ENSCING00000011474	-	96	86.719	Ciona_intestinalis
ENSCJAG00000042216	-	90	86.719	ENSCSAVG00000008353	-	88	86.719	Ciona_savignyi
ENSCJAG00000042216	-	100	100.000	ENSCANG00000043665	POLR2D	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000042216	-	100	100.000	ENSCGRG00001013608	Polr2d	100	100.000	Cricetulus_griseus_chok1gshd
ENSCJAG00000042216	-	82	100.000	ENSCGRG00000012624	Polr2d	100	100.000	Cricetulus_griseus_crigri
ENSCJAG00000042216	-	100	90.278	ENSCSEG00000006147	polr2d	100	90.278	Cynoglossus_semilaevis
ENSCJAG00000042216	-	100	90.972	ENSCVAG00000000779	polr2d	100	90.972	Cyprinodon_variegatus
ENSCJAG00000042216	-	100	92.254	ENSDARG00000076509	polr2d	100	92.254	Danio_rerio
ENSCJAG00000042216	-	100	97.887	ENSDNOG00000008527	POLR2D	100	97.887	Dasypus_novemcinctus
ENSCJAG00000042216	-	100	99.296	ENSDORG00000026897	Polr2d	100	99.296	Dipodomys_ordii
ENSCJAG00000042216	-	92	77.692	FBgn0263757	Rpb4	94	77.692	Drosophila_melanogaster
ENSCJAG00000042216	-	100	92.254	ENSEBUG00000007675	polr2d	100	92.254	Eptatretus_burgeri
ENSCJAG00000042216	-	100	99.296	ENSEASG00005007103	POLR2D	100	99.296	Equus_asinus_asinus
ENSCJAG00000042216	-	100	100.000	ENSECAG00000000556	POLR2D	100	100.000	Equus_caballus
ENSCJAG00000042216	-	99	91.489	ENSELUG00000005928	polr2d	99	91.489	Esox_lucius
ENSCJAG00000042216	-	100	100.000	ENSFCAG00000027816	POLR2D	100	100.000	Felis_catus
ENSCJAG00000042216	-	100	97.887	ENSFALG00000003528	POLR2D	100	97.887	Ficedula_albicollis
ENSCJAG00000042216	-	100	98.592	ENSFDAG00000007217	POLR2D	100	98.592	Fukomys_damarensis
ENSCJAG00000042216	-	100	93.706	ENSGMOG00000001823	polr2d	99	93.706	Gadus_morhua
ENSCJAG00000042216	-	100	97.183	ENSGALG00000002057	POLR2D	100	97.183	Gallus_gallus
ENSCJAG00000042216	-	100	91.667	ENSGAFG00000016932	polr2d	71	91.667	Gambusia_affinis
ENSCJAG00000042216	-	100	90.278	ENSGACG00000004639	polr2d	100	90.278	Gasterosteus_aculeatus
ENSCJAG00000042216	-	100	95.775	ENSGAGG00000021308	POLR2D	100	95.775	Gopherus_agassizii
ENSCJAG00000042216	-	100	100.000	ENSGGOG00000004723	POLR2D	100	100.000	Gorilla_gorilla
ENSCJAG00000042216	-	100	99.296	ENSHGLG00000016570	Polr2d	100	99.296	Heterocephalus_glaber_female
ENSCJAG00000042216	-	100	99.296	ENSHGLG00100013785	Polr2d	100	99.296	Heterocephalus_glaber_male
ENSCJAG00000042216	-	100	88.732	ENSHCOG00000006425	polr2d	100	88.732	Hippocampus_comes
ENSCJAG00000042216	-	100	91.549	ENSIPUG00000011192	polr2d	100	91.549	Ictalurus_punctatus
ENSCJAG00000042216	-	100	97.887	ENSSTOG00000023329	POLR2D	100	97.887	Ictidomys_tridecemlineatus
ENSCJAG00000042216	-	100	98.592	ENSJJAG00000015053	-	100	98.592	Jaculus_jaculus
ENSCJAG00000042216	-	82	94.017	ENSJJAG00000005723	-	94	94.017	Jaculus_jaculus
ENSCJAG00000042216	-	100	89.437	ENSJJAG00000000783	-	100	89.437	Jaculus_jaculus
ENSCJAG00000042216	-	85	90.909	ENSKMAG00000010677	polr2d	68	90.909	Kryptolebias_marmoratus
ENSCJAG00000042216	-	100	96.479	ENSLACG00000017253	POLR2D	100	96.479	Latimeria_chalumnae
ENSCJAG00000042216	-	100	91.667	ENSLOCG00000009106	polr2d	100	91.667	Lepisosteus_oculatus
ENSCJAG00000042216	-	100	99.296	ENSLAFG00000001848	POLR2D	100	99.296	Loxodonta_africana
ENSCJAG00000042216	-	100	99.296	ENSMFAG00000031937	POLR2D	100	99.296	Macaca_fascicularis
ENSCJAG00000042216	-	100	99.296	ENSMMUG00000001989	POLR2D	100	99.296	Macaca_mulatta
ENSCJAG00000042216	-	100	99.296	ENSMNEG00000035505	POLR2D	100	99.296	Macaca_nemestrina
ENSCJAG00000042216	-	100	99.296	ENSMLEG00000035827	POLR2D	100	99.296	Mandrillus_leucophaeus
ENSCJAG00000042216	-	100	97.183	ENSMGAG00000001248	POLR2D	100	97.183	Meleagris_gallopavo
ENSCJAG00000042216	-	100	99.296	ENSMAUG00000014518	Polr2d	100	99.296	Mesocricetus_auratus
ENSCJAG00000042216	-	100	99.296	ENSMICG00000009931	POLR2D	100	99.296	Microcebus_murinus
ENSCJAG00000042216	-	100	97.183	ENSMOCG00000019367	Polr2d	100	97.183	Microtus_ochrogaster
ENSCJAG00000042216	-	100	81.690	ENSMODG00000025026	-	100	81.690	Monodelphis_domestica
ENSCJAG00000042216	-	100	81.690	ENSMODG00000025027	-	100	81.690	Monodelphis_domestica
ENSCJAG00000042216	-	100	98.592	ENSMODG00000018653	-	100	98.592	Monodelphis_domestica
ENSCJAG00000042216	-	100	81.690	ENSMODG00000025028	-	100	81.690	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.986	ENSMODG00000025029	-	100	80.986	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.986	ENSMODG00000025031	-	100	80.986	Monodelphis_domestica
ENSCJAG00000042216	-	100	81.690	ENSMODG00000025030	-	100	81.690	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.986	ENSMODG00000025033	-	100	80.986	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.282	ENSMODG00000025032	-	100	80.282	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.986	ENSMODG00000025035	-	100	80.986	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.986	ENSMODG00000025034	-	100	80.986	Monodelphis_domestica
ENSCJAG00000042216	-	100	80.986	ENSMODG00000025036	-	100	80.986	Monodelphis_domestica
ENSCJAG00000042216	-	100	90.972	ENSMALG00000018266	polr2d	100	90.972	Monopterus_albus
ENSCJAG00000042216	-	100	100.000	MGP_CAROLIEiJ_G0022066	Polr2d	100	100.000	Mus_caroli
ENSCJAG00000042216	-	100	100.000	ENSMUSG00000024258	Polr2d	100	100.000	Mus_musculus
ENSCJAG00000042216	-	100	100.000	MGP_PahariEiJ_G0018800	Polr2d	100	100.000	Mus_pahari
ENSCJAG00000042216	-	100	100.000	MGP_SPRETEiJ_G0022977	Polr2d	100	100.000	Mus_spretus
ENSCJAG00000042216	-	100	100.000	ENSMPUG00000016685	POLR2D	100	100.000	Mustela_putorius_furo
ENSCJAG00000042216	-	83	100.000	ENSMLUG00000006862	POLR2D	100	100.000	Myotis_lucifugus
ENSCJAG00000042216	-	100	100.000	ENSNGAG00000014862	Polr2d	100	100.000	Nannospalax_galili
ENSCJAG00000042216	-	100	100.000	ENSNLEG00000027191	POLR2D	100	100.000	Nomascus_leucogenys
ENSCJAG00000042216	-	82	99.145	ENSOPRG00000005327	POLR2D	100	99.145	Ochotona_princeps
ENSCJAG00000042216	-	100	99.296	ENSODEG00000005262	POLR2D	100	99.296	Octodon_degus
ENSCJAG00000042216	-	100	90.972	ENSONIG00000017290	polr2d	100	90.972	Oreochromis_niloticus
ENSCJAG00000042216	-	83	99.153	ENSOANG00000013216	POLR2D	100	99.153	Ornithorhynchus_anatinus
ENSCJAG00000042216	-	100	92.308	ENSOCUG00000021449	-	100	92.308	Oryctolagus_cuniculus
ENSCJAG00000042216	-	100	97.183	ENSOCUG00000023403	-	100	97.183	Oryctolagus_cuniculus
ENSCJAG00000042216	-	100	88.194	ENSORLG00000005266	polr2d	100	88.194	Oryzias_latipes
ENSCJAG00000042216	-	100	88.194	ENSORLG00020006647	polr2d	100	88.194	Oryzias_latipes_hni
ENSCJAG00000042216	-	100	88.194	ENSORLG00015003222	polr2d	100	88.194	Oryzias_latipes_hsok
ENSCJAG00000042216	-	100	88.889	ENSOMEG00000018915	polr2d	100	88.889	Oryzias_melastigma
ENSCJAG00000042216	-	100	97.917	ENSOGAG00000017118	POLR2D	100	97.917	Otolemur_garnettii
ENSCJAG00000042216	-	100	98.592	ENSOARG00000015995	POLR2D	100	98.592	Ovis_aries
ENSCJAG00000042216	-	100	100.000	ENSPPRG00000020222	POLR2D	100	100.000	Panthera_pardus
ENSCJAG00000042216	-	100	100.000	ENSPTIG00000018618	POLR2D	100	100.000	Panthera_tigris_altaica
ENSCJAG00000042216	-	100	100.000	ENSPTRG00000012436	POLR2D	100	100.000	Pan_troglodytes
ENSCJAG00000042216	-	100	99.296	ENSPANG00000018602	POLR2D	100	99.296	Papio_anubis
ENSCJAG00000042216	-	99	92.958	ENSPKIG00000012166	polr2d	99	92.958	Paramormyrops_kingsleyae
ENSCJAG00000042216	-	83	99.153	ENSPSIG00000002873	POLR2D	100	99.153	Pelodiscus_sinensis
ENSCJAG00000042216	-	100	100.000	ENSPEMG00000018244	Polr2d	100	100.000	Peromyscus_maniculatus_bairdii
ENSCJAG00000042216	-	100	88.028	ENSPMAG00000005021	polr2d	99	88.028	Petromyzon_marinus
ENSCJAG00000042216	-	100	91.667	ENSPFOG00000008969	polr2d	100	91.667	Poecilia_formosa
ENSCJAG00000042216	-	100	91.667	ENSPLAG00000017210	polr2d	100	91.667	Poecilia_latipinna
ENSCJAG00000042216	-	100	91.667	ENSPMEG00000005160	polr2d	100	91.667	Poecilia_mexicana
ENSCJAG00000042216	-	73	95.192	ENSPREG00000021862	polr2d	100	95.192	Poecilia_reticulata
ENSCJAG00000042216	-	100	100.000	ENSPPYG00000012759	POLR2D	100	100.000	Pongo_abelii
ENSCJAG00000042216	-	100	99.296	ENSPCAG00000001396	POLR2D	100	99.296	Procavia_capensis
ENSCJAG00000042216	-	100	99.296	ENSPCOG00000022076	POLR2D	100	99.296	Propithecus_coquereli
ENSCJAG00000042216	-	100	99.296	ENSPVAG00000004002	POLR2D	100	99.296	Pteropus_vampyrus
ENSCJAG00000042216	-	100	91.608	ENSPNAG00000018246	polr2d	100	91.608	Pygocentrus_nattereri
ENSCJAG00000042216	-	100	100.000	ENSRNOG00000016231	Polr2d	100	100.000	Rattus_norvegicus
ENSCJAG00000042216	-	100	100.000	ENSRBIG00000039326	POLR2D	100	100.000	Rhinopithecus_bieti
ENSCJAG00000042216	-	100	100.000	ENSRROG00000023289	POLR2D	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000042216	-	100	97.887	ENSSHAG00000014817	-	100	97.887	Sarcophilus_harrisii
ENSCJAG00000042216	-	92	96.183	ENSSFOG00015024204	polr2d	100	91.667	Scleropages_formosus
ENSCJAG00000042216	-	100	90.972	ENSSDUG00000006060	polr2d	100	90.972	Seriola_dumerili
ENSCJAG00000042216	-	95	93.333	ENSSLDG00000024485	polr2d	100	90.345	Seriola_lalandi_dorsalis
ENSCJAG00000042216	-	82	99.145	ENSSARG00000009037	POLR2D	100	99.145	Sorex_araneus
ENSCJAG00000042216	-	100	97.183	ENSSPUG00000014915	POLR2D	100	97.183	Sphenodon_punctatus
ENSCJAG00000042216	-	100	90.972	ENSSPAG00000013386	polr2d	100	90.972	Stegastes_partitus
ENSCJAG00000042216	-	100	100.000	ENSSSCG00000039230	POLR2D	100	100.000	Sus_scrofa
ENSCJAG00000042216	-	100	97.183	ENSTGUG00000005773	POLR2D	99	97.183	Taeniopygia_guttata
ENSCJAG00000042216	-	100	90.845	ENSTRUG00000004740	polr2d	100	90.845	Takifugu_rubripes
ENSCJAG00000042216	-	99	92.199	ENSTNIG00000011210	polr2d	99	92.199	Tetraodon_nigroviridis
ENSCJAG00000042216	-	82	100.000	ENSTBEG00000006081	POLR2D	100	100.000	Tupaia_belangeri
ENSCJAG00000042216	-	82	100.000	ENSTTRG00000010055	POLR2D	100	100.000	Tursiops_truncatus
ENSCJAG00000042216	-	92	99.231	ENSUAMG00000024374	POLR2D	98	99.231	Ursus_americanus
ENSCJAG00000042216	-	98	89.209	ENSUMAG00000008280	POLR2D	100	100.000	Ursus_maritimus
ENSCJAG00000042216	-	82	100.000	ENSVPAG00000007239	POLR2D	100	100.000	Vicugna_pacos
ENSCJAG00000042216	-	100	100.000	ENSVVUG00000008616	POLR2D	100	100.000	Vulpes_vulpes
ENSCJAG00000042216	-	100	90.845	ENSXETG00000002955	polr2d	100	90.845	Xenopus_tropicalis
ENSCJAG00000042216	-	73	95.192	ENSXCOG00000012668	polr2d	100	95.192	Xiphophorus_couchianus
ENSCJAG00000042216	-	73	95.192	ENSXMAG00000014031	polr2d	100	95.192	Xiphophorus_maculatus