EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000042247 (Gene tree)
Gene ID: -
Gene Symbol: MRPS18C
Alias: CGI-134|FLJ11146|FLJ22967|MRPS18-1
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 5656 bases
Position: chrNTIC01033278.1:84333214-84338869
Accession: 100402309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000061091	Ribosomal_S18	PF01084.20	6.6e-22	1	1
ENSCJAP00000054740	Ribosomal_S18	PF01084.20	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000079798	MRPS18C-203	213	-	ENSCJAP00000064351	71 (aa)	-	A0A2R8PI44
ENSCJAT00000074088	MRPS18C-201	450	-	ENSCJAP00000061091	149 (aa)	XP_002745690	A0A2R8MK94
ENSCJAT00000074414	MRPS18C-202	351	-	ENSCJAP00000054740	116 (aa)	-	A0A2R8P3Q7

Gene Model

Click here to download ENSCJAG00000042247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000042247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000042247	MRPS18C	100	93.103	ENSG00000163319	MRPS18C	100	93.103	Homo_sapiens
ENSCJAG00000042247	MRPS18C	97	76.389	ENSAMEG00000004915	MRPS18C	100	76.389	Ailuropoda_melanoleuca
ENSCJAG00000042247	MRPS18C	97	86.111	ENSANAG00000028055	-	100	86.111	Aotus_nancymaae
ENSCJAG00000042247	MRPS18C	99	78.992	ENSANAG00000025323	-	94	78.992	Aotus_nancymaae
ENSCJAG00000042247	MRPS18C	100	72.414	ENSBTAG00000049836	-	100	72.414	Bos_taurus
ENSCJAG00000042247	MRPS18C	97	81.250	ENSBTAG00000018155	MRPS18C	100	81.250	Bos_taurus
ENSCJAG00000042247	MRPS18C	97	84.028	ENSCAFG00020010491	MRPS18C	100	84.028	Canis_lupus_dingo
ENSCJAG00000042247	MRPS18C	89	85.714	ENSCHIG00000004461	-	92	85.714	Capra_hircus
ENSCJAG00000042247	MRPS18C	96	67.361	ENSCHIG00000018805	-	99	67.361	Capra_hircus
ENSCJAG00000042247	MRPS18C	100	66.379	ENSCHIG00000016551	-	100	66.379	Capra_hircus
ENSCJAG00000042247	MRPS18C	97	70.833	ENSCHIG00000022740	-	100	70.833	Capra_hircus
ENSCJAG00000042247	MRPS18C	72	74.074	ENSCHIG00000019359	-	98	74.074	Capra_hircus
ENSCJAG00000042247	MRPS18C	97	83.333	ENSTSYG00000012924	MRPS18C	100	83.333	Carlito_syrichta
ENSCJAG00000042247	MRPS18C	97	82.639	ENSCPOG00000009198	MRPS18C	100	82.639	Cavia_porcellus
ENSCJAG00000042247	MRPS18C	99	80.315	ENSCCAG00000025155	-	95	83.217	Cebus_capucinus
ENSCJAG00000042247	MRPS18C	100	95.690	ENSCCAG00000026577	-	100	96.528	Cebus_capucinus
ENSCJAG00000042247	MRPS18C	97	95.139	ENSCCAG00000019347	-	100	95.139	Cebus_capucinus
ENSCJAG00000042247	MRPS18C	97	81.944	ENSCCAG00000028283	-	100	81.944	Cebus_capucinus
ENSCJAG00000042247	MRPS18C	100	95.690	ENSCATG00000040697	MRPS18C	100	95.833	Cercocebus_atys
ENSCJAG00000042247	MRPS18C	97	82.639	ENSCLAG00000017397	-	100	82.639	Chinchilla_lanigera
ENSCJAG00000042247	MRPS18C	97	82.192	ENSCLAG00000008205	-	100	82.192	Chinchilla_lanigera
ENSCJAG00000042247	MRPS18C	97	77.778	ENSCANG00000041165	-	100	77.778	Colobus_angolensis_palliatus
ENSCJAG00000042247	MRPS18C	100	95.690	ENSCANG00000038907	MRPS18C	100	95.833	Colobus_angolensis_palliatus
ENSCJAG00000042247	MRPS18C	97	84.956	ENSCANG00000037347	-	96	84.956	Colobus_angolensis_palliatus
ENSCJAG00000042247	MRPS18C	97	84.722	ENSCGRG00001000103	Mrps18c	100	84.722	Cricetulus_griseus_chok1gshd
ENSCJAG00000042247	MRPS18C	97	84.722	ENSCGRG00000002192	Mrps18c	100	84.722	Cricetulus_griseus_crigri
ENSCJAG00000042247	MRPS18C	95	81.690	ENSDORG00000012749	Mrps18c	100	81.690	Dipodomys_ordii
ENSCJAG00000042247	MRPS18C	100	54.930	ENSETEG00000012223	-	100	54.930	Echinops_telfairi
ENSCJAG00000042247	MRPS18C	97	86.111	ENSEASG00005013234	MRPS18C	100	86.111	Equus_asinus_asinus
ENSCJAG00000042247	MRPS18C	97	86.806	ENSECAG00000020387	MRPS18C	100	86.806	Equus_caballus
ENSCJAG00000042247	MRPS18C	100	59.722	ENSEEUG00000003504	MRPS18C	99	59.722	Erinaceus_europaeus
ENSCJAG00000042247	MRPS18C	97	83.333	ENSFCAG00000042464	MRPS18C	100	83.333	Felis_catus
ENSCJAG00000042247	MRPS18C	97	83.333	ENSFDAG00000000250	-	100	83.333	Fukomys_damarensis
ENSCJAG00000042247	MRPS18C	97	70.833	ENSFDAG00000008778	-	100	70.833	Fukomys_damarensis
ENSCJAG00000042247	MRPS18C	100	84.483	ENSGGOG00000040785	-	100	84.483	Gorilla_gorilla
ENSCJAG00000042247	MRPS18C	97	79.861	ENSGGOG00000008603	MRPS18C	100	79.861	Gorilla_gorilla
ENSCJAG00000042247	MRPS18C	100	76.724	ENSGGOG00000037903	-	100	76.724	Gorilla_gorilla
ENSCJAG00000042247	MRPS18C	97	77.778	ENSHGLG00000012671	-	98	77.778	Heterocephalus_glaber_female
ENSCJAG00000042247	MRPS18C	97	77.778	ENSHGLG00000020134	-	100	77.778	Heterocephalus_glaber_female
ENSCJAG00000042247	MRPS18C	97	82.877	ENSHGLG00000002953	-	100	82.877	Heterocephalus_glaber_female
ENSCJAG00000042247	MRPS18C	97	77.778	ENSHGLG00100015568	-	98	77.778	Heterocephalus_glaber_male
ENSCJAG00000042247	MRPS18C	97	77.778	ENSHGLG00100019678	-	100	77.778	Heterocephalus_glaber_male
ENSCJAG00000042247	MRPS18C	97	82.877	ENSHGLG00100016235	-	100	82.877	Heterocephalus_glaber_male
ENSCJAG00000042247	MRPS18C	97	84.028	ENSSTOG00000007989	MRPS18C	100	84.028	Ictidomys_tridecemlineatus
ENSCJAG00000042247	MRPS18C	100	67.241	ENSJJAG00000022437	Mrps18c	100	67.241	Jaculus_jaculus
ENSCJAG00000042247	MRPS18C	97	82.639	ENSLAFG00000001059	MRPS18C	100	82.639	Loxodonta_africana
ENSCJAG00000042247	MRPS18C	100	77.500	ENSMFAG00000041276	-	100	77.500	Macaca_fascicularis
ENSCJAG00000042247	MRPS18C	100	93.966	ENSMFAG00000003991	MRPS18C	100	94.444	Macaca_fascicularis
ENSCJAG00000042247	MRPS18C	97	83.333	ENSMMUG00000048717	-	100	83.333	Macaca_mulatta
ENSCJAG00000042247	MRPS18C	97	80.556	ENSMMUG00000039146	-	100	80.556	Macaca_mulatta
ENSCJAG00000042247	MRPS18C	100	93.966	ENSMMUG00000015353	MRPS18C	100	93.966	Macaca_mulatta
ENSCJAG00000042247	MRPS18C	100	93.966	ENSMNEG00000043663	MRPS18C	100	94.444	Macaca_nemestrina
ENSCJAG00000042247	MRPS18C	100	73.333	ENSMNEG00000018700	-	100	73.333	Macaca_nemestrina
ENSCJAG00000042247	MRPS18C	100	95.690	ENSMLEG00000038884	MRPS18C	100	95.833	Mandrillus_leucophaeus
ENSCJAG00000042247	MRPS18C	100	84.483	ENSMICG00000032609	-	100	85.417	Microcebus_murinus
ENSCJAG00000042247	MRPS18C	100	79.487	ENSMICG00000037615	-	100	79.487	Microcebus_murinus
ENSCJAG00000042247	MRPS18C	97	82.639	ENSMOCG00000015591	-	100	82.639	Microtus_ochrogaster
ENSCJAG00000042247	MRPS18C	97	80.556	ENSMOCG00000009898	-	100	80.556	Microtus_ochrogaster
ENSCJAG00000042247	MRPS18C	95	74.126	ENSMODG00000020773	MRPS18C	100	74.126	Monodelphis_domestica
ENSCJAG00000042247	MRPS18C	97	78.082	MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	Mus_caroli
ENSCJAG00000042247	MRPS18C	97	76.712	ENSMUSG00000016833	Mrps18c	100	76.712	Mus_musculus
ENSCJAG00000042247	MRPS18C	97	79.452	MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	Mus_pahari
ENSCJAG00000042247	MRPS18C	81	76.230	MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	Mus_spretus
ENSCJAG00000042247	MRPS18C	97	79.167	ENSMLUG00000017057	MRPS18C	100	79.167	Myotis_lucifugus
ENSCJAG00000042247	MRPS18C	85	88.889	ENSNGAG00000015980	Mrps18c	100	83.333	Nannospalax_galili
ENSCJAG00000042247	MRPS18C	100	86.207	ENSNLEG00000018188	-	100	87.671	Nomascus_leucogenys
ENSCJAG00000042247	MRPS18C	100	93.103	ENSNLEG00000009119	MRPS18C	100	93.750	Nomascus_leucogenys
ENSCJAG00000042247	MRPS18C	66	79.798	ENSOPRG00000004113	MRPS18C	68	79.798	Ochotona_princeps
ENSCJAG00000042247	MRPS18C	97	80.137	ENSODEG00000007599	-	100	80.137	Octodon_degus
ENSCJAG00000042247	MRPS18C	97	81.944	ENSODEG00000020349	-	100	81.944	Octodon_degus
ENSCJAG00000042247	MRPS18C	97	82.639	ENSOARG00000002770	MRPS18C	100	82.639	Ovis_aries
ENSCJAG00000042247	MRPS18C	100	77.586	ENSPPAG00000037400	-	100	77.586	Pan_paniscus
ENSCJAG00000042247	MRPS18C	100	93.103	ENSPPAG00000037122	MRPS18C	100	93.103	Pan_paniscus
ENSCJAG00000042247	MRPS18C	97	84.028	ENSPPRG00000011089	MRPS18C	100	84.028	Panthera_pardus
ENSCJAG00000042247	MRPS18C	97	83.333	ENSPTIG00000021242	MRPS18C	100	83.333	Panthera_tigris_altaica
ENSCJAG00000042247	MRPS18C	100	93.103	ENSPTRG00000016233	MRPS18C	100	93.103	Pan_troglodytes
ENSCJAG00000042247	MRPS18C	100	76.724	ENSPTRG00000047058	-	100	76.724	Pan_troglodytes
ENSCJAG00000042247	MRPS18C	100	93.966	ENSPANG00000033931	MRPS18C	100	94.444	Papio_anubis
ENSCJAG00000042247	MRPS18C	97	80.556	ENSPANG00000034202	-	100	80.556	Papio_anubis
ENSCJAG00000042247	MRPS18C	97	81.944	ENSPEMG00000008390	Mrps18c	100	81.944	Peromyscus_maniculatus_bairdii
ENSCJAG00000042247	MRPS18C	93	62.590	ENSPCIG00000000097	-	96	62.590	Phascolarctos_cinereus
ENSCJAG00000042247	MRPS18C	95	72.535	ENSPCIG00000005376	-	100	72.535	Phascolarctos_cinereus
ENSCJAG00000042247	MRPS18C	68	92.157	ENSPCIG00000019737	-	100	92.157	Phascolarctos_cinereus
ENSCJAG00000042247	MRPS18C	97	95.139	ENSPPYG00000025867	MRPS18C	100	95.139	Pongo_abelii
ENSCJAG00000042247	MRPS18C	95	90.071	ENSPPYG00000025835	-	99	90.071	Pongo_abelii
ENSCJAG00000042247	MRPS18C	97	82.639	ENSPCAG00000004975	MRPS18C	100	82.639	Procavia_capensis
ENSCJAG00000042247	MRPS18C	100	83.621	ENSPCOG00000017634	MRPS18C	100	86.111	Propithecus_coquereli
ENSCJAG00000042247	MRPS18C	66	80.808	ENSPVAG00000006439	MRPS18C	100	80.808	Pteropus_vampyrus
ENSCJAG00000042247	MRPS18C	97	76.027	ENSRNOG00000002178	Mrps18c	100	76.027	Rattus_norvegicus
ENSCJAG00000042247	MRPS18C	100	76.724	ENSRBIG00000031637	-	100	76.724	Rhinopithecus_bieti
ENSCJAG00000042247	MRPS18C	97	81.944	ENSRBIG00000035023	-	100	81.944	Rhinopithecus_bieti
ENSCJAG00000042247	MRPS18C	100	95.690	ENSRBIG00000041685	MRPS18C	100	95.833	Rhinopithecus_bieti
ENSCJAG00000042247	MRPS18C	100	75.862	ENSRROG00000030722	-	100	75.862	Rhinopithecus_roxellana
ENSCJAG00000042247	MRPS18C	97	81.944	ENSRROG00000033834	-	100	81.944	Rhinopithecus_roxellana
ENSCJAG00000042247	MRPS18C	100	95.690	ENSRROG00000044334	MRPS18C	100	95.833	Rhinopithecus_roxellana
ENSCJAG00000042247	MRPS18C	92	78.102	ENSSBOG00000032292	-	98	78.102	Saimiri_boliviensis_boliviensis
ENSCJAG00000042247	MRPS18C	100	93.966	ENSSBOG00000027568	-	100	95.139	Saimiri_boliviensis_boliviensis
ENSCJAG00000042247	MRPS18C	98	82.192	ENSSBOG00000022205	-	94	82.192	Saimiri_boliviensis_boliviensis
ENSCJAG00000042247	MRPS18C	97	73.611	ENSSBOG00000029234	-	100	73.611	Saimiri_boliviensis_boliviensis
ENSCJAG00000042247	MRPS18C	95	73.611	ENSSHAG00000007084	MRPS18C	100	73.611	Sarcophilus_harrisii
ENSCJAG00000042247	MRPS18C	97	84.028	ENSSSCG00000038042	MRPS18C	100	84.028	Sus_scrofa
ENSCJAG00000042247	MRPS18C	97	81.944	ENSTBEG00000012505	MRPS18C	100	81.944	Tupaia_belangeri
ENSCJAG00000042247	MRPS18C	97	86.111	ENSTTRG00000004897	MRPS18C	100	86.111	Tursiops_truncatus
ENSCJAG00000042247	MRPS18C	97	88.194	ENSUAMG00000012878	MRPS18C	100	88.194	Ursus_americanus
ENSCJAG00000042247	MRPS18C	97	88.194	ENSUMAG00000008829	MRPS18C	100	88.194	Ursus_maritimus
ENSCJAG00000042247	MRPS18C	97	84.028	ENSVPAG00000011358	MRPS18C	100	84.028	Vicugna_pacos
ENSCJAG00000042247	MRPS18C	97	83.333	ENSVVUG00000015672	MRPS18C	100	83.333	Vulpes_vulpes