EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000042622 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 4674 bases
Position: chrNTIC01038834.1:51790776-51795449
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000062878	LSM	PF01423.22	9.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000067818	-	720	-	ENSCJAP00000062878	239 (aa)	-	A0A2R8NA15

Gene Model

Click here to download ENSCJAG00000042622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000042622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000042622	-	90	85.514	ENSCJAG00000023097	-	89	85.446
ENSCJAG00000042622	-	92	92.308	ENSCJAG00000020971	-	99	92.105
ENSCJAG00000042622	-	95	99.561	ENSCJAG00000003759	-	95	99.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000042622	-	95	99.561	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSCJAG00000042622	-	95	99.119	ENSAMEG00000007034	SNRPN	93	99.119	Ailuropoda_melanoleuca
ENSCJAG00000042622	-	96	98.690	ENSANAG00000034241	SNRPN	95	99.561	Aotus_nancymaae
ENSCJAG00000042622	-	95	98.246	ENSBTAG00000008251	SNRPN	100	97.297	Bos_taurus
ENSCJAG00000042622	-	95	99.123	ENSCAFG00000010127	SNRPN	95	99.123	Canis_familiaris
ENSCJAG00000042622	-	95	99.123	ENSCAFG00020024075	SNRPN	95	99.123	Canis_lupus_dingo
ENSCJAG00000042622	-	96	97.391	ENSCHIG00000017477	SNRPN	100	97.391	Capra_hircus
ENSCJAG00000042622	-	95	99.561	ENSTSYG00000005248	SNRPN	95	99.561	Carlito_syrichta
ENSCJAG00000042622	-	95	99.561	ENSCAPG00000003047	SNRPN	95	99.561	Cavia_aperea
ENSCJAG00000042622	-	95	99.561	ENSCPOG00000020270	SNRPN	95	99.561	Cavia_porcellus
ENSCJAG00000042622	-	95	99.561	ENSCCAG00000024231	SNRPN	95	99.561	Cebus_capucinus
ENSCJAG00000042622	-	95	99.561	ENSCATG00000032518	SNRPN	95	99.561	Cercocebus_atys
ENSCJAG00000042622	-	95	99.561	ENSCLAG00000011376	SNRPN	95	99.561	Chinchilla_lanigera
ENSCJAG00000042622	-	95	99.561	ENSCSAG00000006406	SNRPN	95	99.561	Chlorocebus_sabaeus
ENSCJAG00000042622	-	93	98.198	ENSCHOG00000001846	SNRPN	83	98.198	Choloepus_hoffmanni
ENSCJAG00000042622	-	95	99.561	ENSCANG00000041156	SNRPN	95	99.561	Colobus_angolensis_palliatus
ENSCJAG00000042622	-	95	99.123	ENSCGRG00001004136	Snrpn	95	99.123	Cricetulus_griseus_chok1gshd
ENSCJAG00000042622	-	95	98.684	ENSCGRG00000001621	Snrpn	95	98.684	Cricetulus_griseus_crigri
ENSCJAG00000042622	-	72	91.908	ENSCVAG00000014193	SNRPN	69	92.262	Cyprinodon_variegatus
ENSCJAG00000042622	-	95	98.678	ENSDNOG00000037060	SNRPN	93	98.678	Dasypus_novemcinctus
ENSCJAG00000042622	-	95	99.123	ENSDORG00000004527	Snrpn	95	99.123	Dipodomys_ordii
ENSCJAG00000042622	-	95	99.123	ENSEASG00005017871	SNRPN	95	99.123	Equus_asinus_asinus
ENSCJAG00000042622	-	95	99.123	ENSECAG00000018148	SNRPN	95	99.123	Equus_caballus
ENSCJAG00000042622	-	95	98.238	ENSEEUG00000007440	-	95	98.238	Erinaceus_europaeus
ENSCJAG00000042622	-	96	98.261	ENSFCAG00000022298	-	97	98.261	Felis_catus
ENSCJAG00000042622	-	95	99.123	ENSFDAG00000016578	-	95	99.123	Fukomys_damarensis
ENSCJAG00000042622	-	77	85.246	ENSFDAG00000010528	-	86	85.246	Fukomys_damarensis
ENSCJAG00000042622	-	74	76.836	ENSGMOG00000018161	SNRPN	74	76.190	Gadus_morhua
ENSCJAG00000042622	-	95	99.561	ENSGGOG00000003988	SNRPN	95	99.561	Gorilla_gorilla
ENSCJAG00000042622	-	90	73.023	ENSGGOG00000024469	-	69	83.212	Gorilla_gorilla
ENSCJAG00000042622	-	89	90.141	ENSHGLG00000019812	-	89	90.610	Heterocephalus_glaber_female
ENSCJAG00000042622	-	94	79.167	ENSHGLG00000002327	-	88	84.977	Heterocephalus_glaber_female
ENSCJAG00000042622	-	90	80.465	ENSHGLG00000020936	-	88	79.343	Heterocephalus_glaber_female
ENSCJAG00000042622	-	95	99.561	ENSHGLG00000011924	SNRPN	95	99.561	Heterocephalus_glaber_female
ENSCJAG00000042622	-	95	99.561	ENSHGLG00100016559	SNRPN	95	99.561	Heterocephalus_glaber_male
ENSCJAG00000042622	-	89	90.141	ENSHGLG00100021056	-	89	90.610	Heterocephalus_glaber_male
ENSCJAG00000042622	-	94	76.667	ENSHGLG00100004881	-	88	83.099	Heterocephalus_glaber_male
ENSCJAG00000042622	-	95	99.561	ENSSTOG00000001339	SNRPN	95	99.561	Ictidomys_tridecemlineatus
ENSCJAG00000042622	-	95	99.119	ENSLAFG00000009458	SNRPN	95	99.119	Loxodonta_africana
ENSCJAG00000042622	-	95	99.561	ENSMFAG00000042235	SNRPN	95	99.561	Macaca_fascicularis
ENSCJAG00000042622	-	95	99.561	ENSMMUG00000023139	SNURF	95	99.561	Macaca_mulatta
ENSCJAG00000042622	-	95	99.561	ENSMNEG00000031291	SNRPN	95	99.561	Macaca_nemestrina
ENSCJAG00000042622	-	95	99.561	ENSMLEG00000038837	SNRPN	95	99.561	Mandrillus_leucophaeus
ENSCJAG00000042622	-	92	85.455	ENSMGAG00000008696	SNRPN	95	85.463	Meleagris_gallopavo
ENSCJAG00000042622	-	95	99.561	ENSMAUG00000000051	Snrpn	99	99.561	Mesocricetus_auratus
ENSCJAG00000042622	-	95	99.561	ENSMICG00000042356	SNRPN	95	99.561	Microcebus_murinus
ENSCJAG00000042622	-	95	99.561	ENSMOCG00000015350	Snrpn	95	99.561	Microtus_ochrogaster
ENSCJAG00000042622	-	92	93.665	ENSMODG00000013926	-	95	93.421	Monodelphis_domestica
ENSCJAG00000042622	-	95	99.561	MGP_CAROLIEiJ_G0029815	Snrpn	95	99.561	Mus_caroli
ENSCJAG00000042622	-	95	99.561	ENSMUSG00000102252	Snrpn	95	99.561	Mus_musculus
ENSCJAG00000042622	-	95	99.561	MGP_PahariEiJ_G0013040	Snrpn	95	99.561	Mus_pahari
ENSCJAG00000042622	-	95	99.561	MGP_SPRETEiJ_G0030918	Snrpn	95	99.561	Mus_spretus
ENSCJAG00000042622	-	95	99.123	ENSMPUG00000014638	-	95	99.123	Mustela_putorius_furo
ENSCJAG00000042622	-	88	51.185	ENSMPUG00000007115	-	64	69.718	Mustela_putorius_furo
ENSCJAG00000042622	-	60	70.833	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSCJAG00000042622	-	95	98.678	ENSMLUG00000023361	-	93	98.678	Myotis_lucifugus
ENSCJAG00000042622	-	90	59.009	ENSMLUG00000025849	-	72	63.462	Myotis_lucifugus
ENSCJAG00000042622	-	95	99.561	ENSNGAG00000000181	Snrpn	95	99.561	Nannospalax_galili
ENSCJAG00000042622	-	95	82.456	ENSNLEG00000001376	SNRPN	95	82.456	Nomascus_leucogenys
ENSCJAG00000042622	-	95	99.123	ENSODEG00000013478	-	95	99.123	Octodon_degus
ENSCJAG00000042622	-	95	98.684	ENSODEG00000020110	-	95	98.684	Octodon_degus
ENSCJAG00000042622	-	98	97.436	ENSODEG00000019708	-	98	97.436	Octodon_degus
ENSCJAG00000042622	-	92	78.166	ENSODEG00000016065	-	87	85.990	Octodon_degus
ENSCJAG00000042622	-	95	99.127	ENSOCUG00000003532	-	95	99.127	Oryctolagus_cuniculus
ENSCJAG00000042622	-	74	91.525	ENSORLG00020007490	SNRPN	69	92.857	Oryzias_latipes_hni
ENSCJAG00000042622	-	74	91.525	ENSORLG00015003332	SNRPN	69	92.857	Oryzias_latipes_hsok
ENSCJAG00000042622	-	74	92.090	ENSOMEG00000002066	SNRPN	69	93.452	Oryzias_melastigma
ENSCJAG00000042622	-	95	99.561	ENSOGAG00000007392	SNRPN	95	99.561	Otolemur_garnettii
ENSCJAG00000042622	-	95	98.246	ENSOARG00000009080	SNRPN	95	98.246	Ovis_aries
ENSCJAG00000042622	-	98	69.068	ENSPPAG00000034049	-	65	79.021	Pan_paniscus
ENSCJAG00000042622	-	95	99.561	ENSPPAG00000027650	SNRPN	95	99.561	Pan_paniscus
ENSCJAG00000042622	-	86	64.390	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSCJAG00000042622	-	95	99.123	ENSPPRG00000019878	-	95	99.123	Panthera_pardus
ENSCJAG00000042622	-	96	97.826	ENSPTIG00000004537	SNRPN	95	98.684	Panthera_tigris_altaica
ENSCJAG00000042622	-	98	69.492	ENSPTRG00000052400	-	65	79.720	Pan_troglodytes
ENSCJAG00000042622	-	95	99.561	ENSPTRG00000006826	SNRPN	95	99.561	Pan_troglodytes
ENSCJAG00000042622	-	95	99.561	ENSPANG00000020142	SNRPN	95	99.561	Papio_anubis
ENSCJAG00000042622	-	90	95.327	ENSPEMG00000020979	-	89	95.305	Peromyscus_maniculatus_bairdii
ENSCJAG00000042622	-	95	99.561	ENSPEMG00000012911	-	95	99.561	Peromyscus_maniculatus_bairdii
ENSCJAG00000042622	-	89	85.915	ENSPEMG00000013920	-	88	86.385	Peromyscus_maniculatus_bairdii
ENSCJAG00000042622	-	76	96.703	ENSPCIG00000004699	-	68	94.340	Phascolarctos_cinereus
ENSCJAG00000042622	-	72	91.908	ENSPMEG00000020674	SNRPN	69	92.857	Poecilia_mexicana
ENSCJAG00000042622	-	95	99.561	ENSPPYG00000006269	SNURF	95	99.561	Pongo_abelii
ENSCJAG00000042622	-	96	99.127	ENSPCOG00000014231	SNRPN	95	99.561	Propithecus_coquereli
ENSCJAG00000042622	-	95	99.561	ENSRNOG00000059764	Snrpn	95	99.561	Rattus_norvegicus
ENSCJAG00000042622	-	95	99.561	ENSRBIG00000041765	SNRPN	95	99.561	Rhinopithecus_bieti
ENSCJAG00000042622	-	95	99.561	ENSRROG00000035157	SNRPN	95	99.561	Rhinopithecus_roxellana
ENSCJAG00000042622	-	95	98.246	ENSSBOG00000024929	-	95	98.246	Saimiri_boliviensis_boliviensis
ENSCJAG00000042622	-	95	99.561	ENSSBOG00000000110	-	95	99.561	Saimiri_boliviensis_boliviensis
ENSCJAG00000042622	-	77	96.175	ENSSHAG00000010257	-	87	93.897	Sarcophilus_harrisii
ENSCJAG00000042622	-	95	76.652	ENSSARG00000000072	SNRPN	95	76.652	Sorex_araneus
ENSCJAG00000042622	-	96	98.690	ENSSSCG00000028124	SNRPN	99	98.690	Sus_scrofa
ENSCJAG00000042622	-	95	98.246	ENSTTRG00000010966	SNRPN	84	98.246	Tursiops_truncatus
ENSCJAG00000042622	-	94	98.214	ENSUAMG00000016284	SNRPN	78	98.214	Ursus_americanus
ENSCJAG00000042622	-	95	99.123	ENSUMAG00000025589	SNRPN	95	99.123	Ursus_maritimus
ENSCJAG00000042622	-	96	98.261	ENSVVUG00000017971	SNRPN	94	98.261	Vulpes_vulpes