EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000044669 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 92085 bases
Position: chrNTIC01034389.1:142548554-142640638
Accession: 100403915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000035996	RNA_pol_L_2	PF13656.6	6e-28	1	1
ENSCJAP00000035996	RNA_pol_L	PF01193.24	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000073911	POLR1D-203	129	-	ENSCJAP00000058956	42 (aa)	-	A0A2R8MFY2
ENSCJAT00000071701	POLR1D-201	141	-	ENSCJAP00000060852	46 (aa)	-	A0A2R8N6K8
ENSCJAT00000038011	POLR1D-204	402	-	ENSCJAP00000035996	133 (aa)	XP_002748958	F7DLJ3
ENSCJAT00000076633	POLR1D-202	369	-	ENSCJAP00000056896	122 (aa)	XP_008996308	F6Z580

Gene Model

Click here to download ENSCJAG00000044669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000044669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000044669	POLR1D	80	32.075	ENSCJAG00000016203	-	88	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000044669	POLR1D	100	97.744	ENSG00000186184	POLR1D	100	97.744	Homo_sapiens
ENSCJAG00000044669	POLR1D	83	66.667	ENSAPOG00000021882	polr1d	98	66.667	Acanthochromis_polyacanthus
ENSCJAG00000044669	POLR1D	94	98.400	ENSAMEG00000019095	POLR1D	100	98.400	Ailuropoda_melanoleuca
ENSCJAG00000044669	POLR1D	80	72.222	ENSACIG00000013328	polr1d	94	72.222	Amphilophus_citrinellus
ENSCJAG00000044669	POLR1D	84	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSCJAG00000044669	POLR1D	84	66.964	ENSAPEG00000009489	polr1d	98	66.964	Amphiprion_percula
ENSCJAG00000044669	POLR1D	80	68.224	ENSATEG00000019322	polr1d	94	68.224	Anabas_testudineus
ENSCJAG00000044669	POLR1D	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSCJAG00000044669	POLR1D	100	99.248	ENSANAG00000024486	POLR1D	100	99.248	Aotus_nancymaae
ENSCJAG00000044669	POLR1D	80	71.963	ENSACLG00000023805	polr1d	94	71.963	Astatotilapia_calliptera
ENSCJAG00000044669	POLR1D	80	68.868	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSCJAG00000044669	POLR1D	100	94.737	ENSBTAG00000008642	POLR1D	100	94.737	Bos_taurus
ENSCJAG00000044669	POLR1D	100	94.737	ENSBTAG00000033252	-	100	94.737	Bos_taurus
ENSCJAG00000044669	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSCJAG00000044669	POLR1D	100	98.496	ENSCAFG00000006755	POLR1D	100	98.496	Canis_familiaris
ENSCJAG00000044669	POLR1D	100	95.489	ENSCHIG00000021910	POLR1D	100	95.489	Capra_hircus
ENSCJAG00000044669	POLR1D	93	93.548	ENSTSYG00000026817	-	93	93.548	Carlito_syrichta
ENSCJAG00000044669	POLR1D	96	82.308	ENSTSYG00000034852	-	98	82.353	Carlito_syrichta
ENSCJAG00000044669	POLR1D	96	55.469	ENSCAPG00000006058	-	99	55.469	Cavia_aperea
ENSCJAG00000044669	POLR1D	96	56.250	ENSCPOG00000030450	-	99	56.250	Cavia_porcellus
ENSCJAG00000044669	POLR1D	100	97.744	ENSCCAG00000021349	-	100	97.744	Cebus_capucinus
ENSCJAG00000044669	POLR1D	100	79.699	ENSCCAG00000020191	-	100	79.699	Cebus_capucinus
ENSCJAG00000044669	POLR1D	100	96.241	ENSCATG00000030710	-	100	96.241	Cercocebus_atys
ENSCJAG00000044669	POLR1D	100	85.714	ENSCATG00000022900	-	100	85.714	Cercocebus_atys
ENSCJAG00000044669	POLR1D	93	97.581	ENSCLAG00000017623	POLR1D	100	97.581	Chinchilla_lanigera
ENSCJAG00000044669	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSCJAG00000044669	POLR1D	100	96.241	ENSCANG00000028632	-	100	96.241	Colobus_angolensis_palliatus
ENSCJAG00000044669	POLR1D	100	93.233	ENSCANG00000037694	-	100	93.233	Colobus_angolensis_palliatus
ENSCJAG00000044669	POLR1D	100	94.737	ENSCGRG00001021251	Polr1d	100	94.737	Cricetulus_griseus_chok1gshd
ENSCJAG00000044669	POLR1D	100	94.737	ENSCGRG00000011639	Polr1d	100	94.737	Cricetulus_griseus_crigri
ENSCJAG00000044669	POLR1D	77	71.845	ENSCSEG00000018268	polr1d	91	70.093	Cynoglossus_semilaevis
ENSCJAG00000044669	POLR1D	79	70.476	ENSCVAG00000018527	polr1d	92	70.476	Cyprinodon_variegatus
ENSCJAG00000044669	POLR1D	83	67.273	ENSDARG00000037570	polr1d	98	67.273	Danio_rerio
ENSCJAG00000044669	POLR1D	100	92.537	ENSDNOG00000046247	-	100	92.537	Dasypus_novemcinctus
ENSCJAG00000044669	POLR1D	100	94.737	ENSDNOG00000043676	-	100	94.737	Dasypus_novemcinctus
ENSCJAG00000044669	POLR1D	100	95.489	ENSDORG00000029155	Polr1d	100	95.489	Dipodomys_ordii
ENSCJAG00000044669	POLR1D	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSCJAG00000044669	POLR1D	93	90.323	ENSETEG00000012797	POLR1D	100	90.323	Echinops_telfairi
ENSCJAG00000044669	POLR1D	69	69.565	ENSEBUG00000011748	polr1d	63	69.565	Eptatretus_burgeri
ENSCJAG00000044669	POLR1D	96	96.094	ENSEASG00005022487	POLR1D	99	96.094	Equus_asinus_asinus
ENSCJAG00000044669	POLR1D	93	96.774	ENSEEUG00000013144	POLR1D	100	96.774	Erinaceus_europaeus
ENSCJAG00000044669	POLR1D	80	68.868	ENSELUG00000005105	rpac2	93	68.868	Esox_lucius
ENSCJAG00000044669	POLR1D	100	96.992	ENSFCAG00000030162	POLR1D	100	96.992	Felis_catus
ENSCJAG00000044669	POLR1D	72	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSCJAG00000044669	POLR1D	100	96.241	ENSFDAG00000004463	POLR1D	100	96.241	Fukomys_damarensis
ENSCJAG00000044669	POLR1D	82	73.636	ENSFHEG00000015410	polr1d	96	73.636	Fundulus_heteroclitus
ENSCJAG00000044669	POLR1D	79	73.333	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSCJAG00000044669	POLR1D	88	69.492	ENSGACG00000018585	polr1d	100	69.492	Gasterosteus_aculeatus
ENSCJAG00000044669	POLR1D	81	76.852	ENSGAGG00000008503	POLR1D	95	76.852	Gopherus_agassizii
ENSCJAG00000044669	POLR1D	100	97.744	ENSGGOG00000004235	POLR1D	100	97.744	Gorilla_gorilla
ENSCJAG00000044669	POLR1D	80	71.963	ENSHBUG00000002111	polr1d	94	71.963	Haplochromis_burtoni
ENSCJAG00000044669	POLR1D	100	96.241	ENSHGLG00000003202	POLR1D	100	96.241	Heterocephalus_glaber_female
ENSCJAG00000044669	POLR1D	100	96.241	ENSHGLG00100009393	POLR1D	100	96.241	Heterocephalus_glaber_male
ENSCJAG00000044669	POLR1D	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSCJAG00000044669	POLR1D	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSCJAG00000044669	POLR1D	100	98.496	ENSSTOG00000013877	POLR1D	100	98.496	Ictidomys_tridecemlineatus
ENSCJAG00000044669	POLR1D	95	74.603	ENSJJAG00000021667	-	75	74.603	Jaculus_jaculus
ENSCJAG00000044669	POLR1D	97	89.474	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSCJAG00000044669	POLR1D	80	67.925	ENSKMAG00000015256	polr1d	93	67.925	Kryptolebias_marmoratus
ENSCJAG00000044669	POLR1D	79	71.429	ENSLBEG00000015919	polr1d	92	71.429	Labrus_bergylta
ENSCJAG00000044669	POLR1D	86	65.217	ENSLACG00000006810	POLR1D	95	65.217	Latimeria_chalumnae
ENSCJAG00000044669	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSCJAG00000044669	POLR1D	100	87.970	ENSLAFG00000032290	POLR1D	100	87.970	Loxodonta_africana
ENSCJAG00000044669	POLR1D	94	96.000	ENSMFAG00000045264	POLR1D	97	96.000	Macaca_fascicularis
ENSCJAG00000044669	POLR1D	87	96.552	ENSMMUG00000020386	POLR1D	100	96.552	Macaca_mulatta
ENSCJAG00000044669	POLR1D	100	77.444	ENSMMUG00000041570	-	100	77.444	Macaca_mulatta
ENSCJAG00000044669	POLR1D	100	80.451	ENSMNEG00000038120	-	100	80.451	Macaca_nemestrina
ENSCJAG00000044669	POLR1D	100	96.992	ENSMNEG00000008630	-	100	96.992	Macaca_nemestrina
ENSCJAG00000044669	POLR1D	100	86.466	ENSMLEG00000032251	-	100	86.466	Mandrillus_leucophaeus
ENSCJAG00000044669	POLR1D	100	96.992	ENSMLEG00000041048	-	100	96.992	Mandrillus_leucophaeus
ENSCJAG00000044669	POLR1D	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSCJAG00000044669	POLR1D	75	75.000	ENSMZEG00005006638	polr1d	88	75.000	Maylandia_zebra
ENSCJAG00000044669	POLR1D	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSCJAG00000044669	POLR1D	100	94.737	ENSMAUG00000001946	Polr1d	100	94.737	Mesocricetus_auratus
ENSCJAG00000044669	POLR1D	99	79.545	ENSMICG00000007349	-	100	79.545	Microcebus_murinus
ENSCJAG00000044669	POLR1D	100	96.241	ENSMICG00000016883	-	100	96.241	Microcebus_murinus
ENSCJAG00000044669	POLR1D	99	93.939	ENSMOCG00000021288	Polr1d	99	93.939	Microtus_ochrogaster
ENSCJAG00000044669	POLR1D	80	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSCJAG00000044669	POLR1D	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSCJAG00000044669	POLR1D	78	69.231	ENSMALG00000010652	polr1d	91	69.231	Monopterus_albus
ENSCJAG00000044669	POLR1D	100	90.226	MGP_CAROLIEiJ_G0028034	Polr1d	100	90.226	Mus_caroli
ENSCJAG00000044669	POLR1D	100	90.226	ENSMUSG00000029642	Polr1d	100	90.226	Mus_musculus
ENSCJAG00000044669	POLR1D	100	89.474	MGP_PahariEiJ_G0024600	Polr1d	100	89.474	Mus_pahari
ENSCJAG00000044669	POLR1D	100	90.977	MGP_SPRETEiJ_G0029032	Polr1d	100	90.977	Mus_spretus
ENSCJAG00000044669	POLR1D	99	86.364	ENSMLUG00000004118	-	99	86.364	Myotis_lucifugus
ENSCJAG00000044669	POLR1D	100	96.241	ENSMLUG00000027169	-	100	96.241	Myotis_lucifugus
ENSCJAG00000044669	POLR1D	87	97.414	ENSNGAG00000006014	Polr1d	100	97.414	Nannospalax_galili
ENSCJAG00000044669	POLR1D	80	71.963	ENSNBRG00000020327	polr1d	94	71.963	Neolamprologus_brichardi
ENSCJAG00000044669	POLR1D	100	97.744	ENSNLEG00000000358	POLR1D	100	97.744	Nomascus_leucogenys
ENSCJAG00000044669	POLR1D	100	81.955	ENSODEG00000014801	-	100	81.955	Octodon_degus
ENSCJAG00000044669	POLR1D	100	96.241	ENSODEG00000005294	-	100	96.241	Octodon_degus
ENSCJAG00000044669	POLR1D	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSCJAG00000044669	POLR1D	100	96.241	ENSOCUG00000015706	POLR1D	82	96.241	Oryctolagus_cuniculus
ENSCJAG00000044669	POLR1D	80	69.811	ENSORLG00000010257	polr1d	93	69.811	Oryzias_latipes
ENSCJAG00000044669	POLR1D	83	67.568	ENSORLG00020000533	polr1d	75	67.568	Oryzias_latipes_hni
ENSCJAG00000044669	POLR1D	85	68.142	ENSORLG00015013267	polr1d	75	68.142	Oryzias_latipes_hsok
ENSCJAG00000044669	POLR1D	86	67.826	ENSOMEG00000014912	polr1d	77	67.826	Oryzias_melastigma
ENSCJAG00000044669	POLR1D	100	96.241	ENSOGAG00000014601	POLR1D	100	96.241	Otolemur_garnettii
ENSCJAG00000044669	POLR1D	94	95.200	ENSOARG00000017005	POLR1D	96	95.200	Ovis_aries
ENSCJAG00000044669	POLR1D	100	96.241	ENSPPAG00000028138	POLR1D	100	96.241	Pan_paniscus
ENSCJAG00000044669	POLR1D	99	96.970	ENSPPRG00000003381	POLR1D	99	96.970	Panthera_pardus
ENSCJAG00000044669	POLR1D	93	96.774	ENSPTIG00000018137	POLR1D	93	96.774	Panthera_tigris_altaica
ENSCJAG00000044669	POLR1D	100	97.744	ENSPTRG00000005734	POLR1D	100	97.744	Pan_troglodytes
ENSCJAG00000044669	POLR1D	100	96.992	ENSPANG00000020259	-	100	96.992	Papio_anubis
ENSCJAG00000044669	POLR1D	100	85.714	ENSPANG00000035051	-	100	85.714	Papio_anubis
ENSCJAG00000044669	POLR1D	86	61.739	ENSPKIG00000021891	polr1d	94	50.000	Paramormyrops_kingsleyae
ENSCJAG00000044669	POLR1D	87	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSCJAG00000044669	POLR1D	84	66.964	ENSPMGG00000010359	polr1d	97	66.964	Periophthalmus_magnuspinnatus
ENSCJAG00000044669	POLR1D	93	57.600	ENSPMGG00000012998	POLR1D	93	57.600	Periophthalmus_magnuspinnatus
ENSCJAG00000044669	POLR1D	100	90.977	ENSPEMG00000006336	-	100	90.977	Peromyscus_maniculatus_bairdii
ENSCJAG00000044669	POLR1D	82	60.550	ENSPMAG00000004228	polr1d	92	60.550	Petromyzon_marinus
ENSCJAG00000044669	POLR1D	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSCJAG00000044669	POLR1D	79	73.333	ENSPFOG00000023343	polr1d	92	75.000	Poecilia_formosa
ENSCJAG00000044669	POLR1D	79	73.333	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSCJAG00000044669	POLR1D	79	73.333	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSCJAG00000044669	POLR1D	79	73.333	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSCJAG00000044669	POLR1D	100	96.241	ENSPCOG00000028175	POLR1D	100	96.241	Propithecus_coquereli
ENSCJAG00000044669	POLR1D	80	71.963	ENSPNYG00000000107	polr1d	94	71.963	Pundamilia_nyererei
ENSCJAG00000044669	POLR1D	76	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSCJAG00000044669	POLR1D	100	96.992	ENSRBIG00000036378	-	100	96.992	Rhinopithecus_bieti
ENSCJAG00000044669	POLR1D	100	93.233	ENSRBIG00000000336	-	100	93.233	Rhinopithecus_bieti
ENSCJAG00000044669	POLR1D	100	96.992	ENSRROG00000042232	-	100	96.992	Rhinopithecus_roxellana
ENSCJAG00000044669	POLR1D	100	93.233	ENSRROG00000026751	-	100	93.233	Rhinopithecus_roxellana
ENSCJAG00000044669	POLR1D	90	45.000	YNL113W	RPC19	85	45.000	Saccharomyces_cerevisiae
ENSCJAG00000044669	POLR1D	100	99.248	ENSSBOG00000028482	-	100	99.248	Saimiri_boliviensis_boliviensis
ENSCJAG00000044669	POLR1D	86	92.982	ENSSBOG00000030146	-	84	92.982	Saimiri_boliviensis_boliviensis
ENSCJAG00000044669	POLR1D	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSCJAG00000044669	POLR1D	83	71.171	ENSSFOG00015011375	polr1d	97	71.171	Scleropages_formosus
ENSCJAG00000044669	POLR1D	80	69.159	ENSSMAG00000011861	polr1d	94	69.159	Scophthalmus_maximus
ENSCJAG00000044669	POLR1D	80	68.224	ENSSDUG00000011930	polr1d	94	68.224	Seriola_dumerili
ENSCJAG00000044669	POLR1D	86	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSCJAG00000044669	POLR1D	100	96.992	ENSSARG00000007840	POLR1D	100	96.992	Sorex_araneus
ENSCJAG00000044669	POLR1D	79	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSCJAG00000044669	POLR1D	79	73.333	ENSSPAG00000011764	polr1d	92	73.333	Stegastes_partitus
ENSCJAG00000044669	POLR1D	100	94.737	ENSSSCG00000009310	POLR1D	100	94.737	Sus_scrofa
ENSCJAG00000044669	POLR1D	72	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSCJAG00000044669	POLR1D	78	66.346	ENSTRUG00000019741	polr1d	91	66.346	Takifugu_rubripes
ENSCJAG00000044669	POLR1D	93	96.774	ENSTBEG00000007006	POLR1D	100	96.774	Tupaia_belangeri
ENSCJAG00000044669	POLR1D	100	98.496	ENSUAMG00000011413	POLR1D	100	98.496	Ursus_americanus
ENSCJAG00000044669	POLR1D	93	98.387	ENSUMAG00000016968	POLR1D	97	98.387	Ursus_maritimus
ENSCJAG00000044669	POLR1D	100	98.496	ENSVVUG00000009216	POLR1D	100	98.496	Vulpes_vulpes
ENSCJAG00000044669	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSCJAG00000044669	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus