EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000044880 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrNTIC01036611.1:85048344-85048715
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000063992	LSM	PF01423.22	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000078957	LSM10-201	372	-	ENSCJAP00000063992	123 (aa)	-	U3DG41

Gene Model

Click here to download ENSCJAG00000044880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000044880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000044880	LSM10	55	30.000	ENSCJAG00000040899	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000044880	LSM10	100	96.748	ENSG00000181817	LSM10	100	96.748	Homo_sapiens
ENSCJAG00000044880	LSM10	100	89.431	ENSAMEG00000019854	LSM10	100	89.431	Ailuropoda_melanoleuca
ENSCJAG00000044880	LSM10	95	67.521	ENSACIG00000015420	oscp1a	77	67.521	Amphilophus_citrinellus
ENSCJAG00000044880	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSCJAG00000044880	LSM10	96	68.644	ENSAOCG00000014654	-	98	68.644	Amphiprion_ocellaris
ENSCJAG00000044880	LSM10	96	68.644	ENSAOCG00000015618	LSM10	98	68.644	Amphiprion_ocellaris
ENSCJAG00000044880	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSCJAG00000044880	LSM10	96	68.644	ENSAPEG00000021845	-	98	68.644	Amphiprion_percula
ENSCJAG00000044880	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSCJAG00000044880	LSM10	100	66.667	ENSACAG00000001231	LSM10	100	66.667	Anolis_carolinensis
ENSCJAG00000044880	LSM10	99	97.541	ENSANAG00000031489	-	100	97.541	Aotus_nancymaae
ENSCJAG00000044880	LSM10	100	99.187	ENSANAG00000018759	-	100	99.187	Aotus_nancymaae
ENSCJAG00000044880	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSCJAG00000044880	LSM10	97	64.706	ENSAMXG00000025301	oscp1a	98	64.706	Astyanax_mexicanus
ENSCJAG00000044880	LSM10	99	90.984	ENSBTAG00000024096	LSM10	100	90.984	Bos_taurus
ENSCJAG00000044880	LSM10	100	91.057	ENSCAFG00000003382	LSM10	100	91.057	Canis_familiaris
ENSCJAG00000044880	LSM10	100	91.057	ENSCAFG00020008920	LSM10	100	91.057	Canis_lupus_dingo
ENSCJAG00000044880	LSM10	99	90.984	ENSCHIG00000009398	LSM10	100	90.984	Capra_hircus
ENSCJAG00000044880	LSM10	100	90.244	ENSCAPG00000012567	LSM10	100	90.244	Cavia_aperea
ENSCJAG00000044880	LSM10	100	90.244	ENSCPOG00000039302	LSM10	100	90.244	Cavia_porcellus
ENSCJAG00000044880	LSM10	99	95.902	ENSCCAG00000008378	-	99	95.902	Cebus_capucinus
ENSCJAG00000044880	LSM10	100	99.187	ENSCCAG00000018913	-	100	99.187	Cebus_capucinus
ENSCJAG00000044880	LSM10	100	96.748	ENSCATG00000006589	LSM10	100	96.748	Cercocebus_atys
ENSCJAG00000044880	LSM10	100	91.870	ENSCLAG00000008633	LSM10	100	91.870	Chinchilla_lanigera
ENSCJAG00000044880	LSM10	100	96.748	ENSCSAG00000000134	LSM10	100	96.748	Chlorocebus_sabaeus
ENSCJAG00000044880	LSM10	100	92.000	ENSCHOG00000008615	LSM10	100	92.000	Choloepus_hoffmanni
ENSCJAG00000044880	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSCJAG00000044880	LSM10	100	96.748	ENSCANG00000019928	LSM10	100	96.748	Colobus_angolensis_palliatus
ENSCJAG00000044880	LSM10	93	82.759	ENSCGRG00001022673	-	93	82.759	Cricetulus_griseus_chok1gshd
ENSCJAG00000044880	LSM10	98	90.833	ENSCGRG00001004317	-	98	90.833	Cricetulus_griseus_chok1gshd
ENSCJAG00000044880	LSM10	93	82.759	ENSCGRG00000015514	-	93	82.759	Cricetulus_griseus_crigri
ENSCJAG00000044880	LSM10	98	90.833	ENSCGRG00000014935	-	98	90.833	Cricetulus_griseus_crigri
ENSCJAG00000044880	LSM10	98	62.500	ENSCSEG00000010374	oscp1a	81	62.500	Cynoglossus_semilaevis
ENSCJAG00000044880	LSM10	98	64.167	ENSCVAG00000001536	oscp1a	91	64.167	Cyprinodon_variegatus
ENSCJAG00000044880	LSM10	69	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSCJAG00000044880	LSM10	98	70.833	ENSDARG00000101222	oscp1a	99	70.833	Danio_rerio
ENSCJAG00000044880	LSM10	98	95.041	ENSDNOG00000036662	LSM10	98	95.041	Dasypus_novemcinctus
ENSCJAG00000044880	LSM10	100	91.057	ENSDORG00000007579	Lsm10	100	91.057	Dipodomys_ordii
ENSCJAG00000044880	LSM10	85	31.193	FBgn0033554	Lsm10	77	31.193	Drosophila_melanogaster
ENSCJAG00000044880	LSM10	100	86.992	ENSETEG00000005703	LSM10	100	86.992	Echinops_telfairi
ENSCJAG00000044880	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSCJAG00000044880	LSM10	100	91.057	ENSEASG00005012194	LSM10	100	91.057	Equus_asinus_asinus
ENSCJAG00000044880	LSM10	100	91.870	ENSECAG00000005071	LSM10	100	91.870	Equus_caballus
ENSCJAG00000044880	LSM10	100	89.431	ENSEEUG00000012032	LSM10	100	89.431	Erinaceus_europaeus
ENSCJAG00000044880	LSM10	99	68.033	ENSELUG00000007452	oscp1a	100	68.033	Esox_lucius
ENSCJAG00000044880	LSM10	100	69.919	ENSFALG00000000851	LSM10	100	69.919	Ficedula_albicollis
ENSCJAG00000044880	LSM10	100	88.618	ENSFDAG00000021056	LSM10	100	88.618	Fukomys_damarensis
ENSCJAG00000044880	LSM10	93	65.217	ENSFHEG00000001058	oscp1a	98	65.217	Fundulus_heteroclitus
ENSCJAG00000044880	LSM10	87	64.486	ENSGMOG00000019832	oscp1a	90	64.486	Gadus_morhua
ENSCJAG00000044880	LSM10	100	72.358	ENSGALG00000002127	LSM10	100	72.358	Gallus_gallus
ENSCJAG00000044880	LSM10	95	58.333	ENSGAFG00000016445	oscp1a	97	58.333	Gambusia_affinis
ENSCJAG00000044880	LSM10	96	63.559	ENSGACG00000002329	oscp1a	97	63.559	Gasterosteus_aculeatus
ENSCJAG00000044880	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSCJAG00000044880	LSM10	100	97.561	ENSGGOG00000003556	LSM10	100	97.561	Gorilla_gorilla
ENSCJAG00000044880	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSCJAG00000044880	LSM10	100	91.057	ENSHGLG00000011625	LSM10	100	91.057	Heterocephalus_glaber_female
ENSCJAG00000044880	LSM10	100	91.057	ENSHGLG00100001769	LSM10	100	91.057	Heterocephalus_glaber_male
ENSCJAG00000044880	LSM10	85	66.667	ENSIPUG00000005808	oscp1a	91	66.667	Ictalurus_punctatus
ENSCJAG00000044880	LSM10	100	90.244	ENSSTOG00000000606	LSM10	100	90.244	Ictidomys_tridecemlineatus
ENSCJAG00000044880	LSM10	96	64.407	ENSKMAG00000012143	oscp1a	98	64.407	Kryptolebias_marmoratus
ENSCJAG00000044880	LSM10	98	62.500	ENSLBEG00000017764	oscp1a	98	62.500	Labrus_bergylta
ENSCJAG00000044880	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSCJAG00000044880	LSM10	98	72.500	ENSLOCG00000018277	oscp1a	98	72.500	Lepisosteus_oculatus
ENSCJAG00000044880	LSM10	100	91.057	ENSLAFG00000009600	LSM10	100	91.057	Loxodonta_africana
ENSCJAG00000044880	LSM10	100	96.748	ENSMFAG00000009115	LSM10	100	96.748	Macaca_fascicularis
ENSCJAG00000044880	LSM10	100	96.748	ENSMMUG00000017338	LSM10	100	96.748	Macaca_mulatta
ENSCJAG00000044880	LSM10	100	96.748	ENSMNEG00000020023	LSM10	100	96.748	Macaca_nemestrina
ENSCJAG00000044880	LSM10	100	96.748	ENSMLEG00000025150	LSM10	100	96.748	Mandrillus_leucophaeus
ENSCJAG00000044880	LSM10	98	66.116	ENSMAMG00000004427	oscp1a	99	66.116	Mastacembelus_armatus
ENSCJAG00000044880	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSCJAG00000044880	LSM10	100	70.732	ENSMGAG00000015707	LSM10	100	70.732	Meleagris_gallopavo
ENSCJAG00000044880	LSM10	98	90.833	ENSMAUG00000016624	Lsm10	98	90.833	Mesocricetus_auratus
ENSCJAG00000044880	LSM10	98	90.833	ENSMOCG00000021943	Lsm10	98	90.833	Microtus_ochrogaster
ENSCJAG00000044880	LSM10	90	67.568	ENSMMOG00000013597	oscp1a	83	67.568	Mola_mola
ENSCJAG00000044880	LSM10	100	81.301	ENSMODG00000023328	LSM10	100	81.301	Monodelphis_domestica
ENSCJAG00000044880	LSM10	58	60.526	ENSMALG00000012661	oscp1a	60	60.526	Monopterus_albus
ENSCJAG00000044880	LSM10	98	90.000	MGP_CAROLIEiJ_G0026467	Lsm10	100	88.172	Mus_caroli
ENSCJAG00000044880	LSM10	98	90.833	ENSMUSG00000050188	Lsm10	100	89.247	Mus_musculus
ENSCJAG00000044880	LSM10	98	90.833	MGP_PahariEiJ_G0028798	Lsm10	100	89.247	Mus_pahari
ENSCJAG00000044880	LSM10	98	90.833	MGP_SPRETEiJ_G0027446	Lsm10	100	89.247	Mus_spretus
ENSCJAG00000044880	LSM10	100	91.057	ENSMPUG00000018593	LSM10	100	91.057	Mustela_putorius_furo
ENSCJAG00000044880	LSM10	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSCJAG00000044880	LSM10	100	91.057	ENSNGAG00000015011	Lsm10	100	91.057	Nannospalax_galili
ENSCJAG00000044880	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSCJAG00000044880	LSM10	100	96.748	ENSNLEG00000033754	LSM10	100	96.748	Nomascus_leucogenys
ENSCJAG00000044880	LSM10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSCJAG00000044880	LSM10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSCJAG00000044880	LSM10	100	91.870	ENSODEG00000019161	LSM10	100	91.870	Octodon_degus
ENSCJAG00000044880	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSCJAG00000044880	LSM10	100	73.984	ENSOANG00000002066	LSM10	100	73.984	Ornithorhynchus_anatinus
ENSCJAG00000044880	LSM10	100	89.431	ENSOCUG00000005333	LSM10	100	89.431	Oryctolagus_cuniculus
ENSCJAG00000044880	LSM10	96	66.102	ENSORLG00000009504	oscp1a	98	66.102	Oryzias_latipes
ENSCJAG00000044880	LSM10	96	66.102	ENSORLG00020016201	oscp1a	98	66.102	Oryzias_latipes_hni
ENSCJAG00000044880	LSM10	96	66.102	ENSORLG00015007794	oscp1a	97	66.102	Oryzias_latipes_hsok
ENSCJAG00000044880	LSM10	100	89.431	ENSOGAG00000002653	LSM10	100	89.431	Otolemur_garnettii
ENSCJAG00000044880	LSM10	99	90.984	ENSOARG00000009596	LSM10	100	90.984	Ovis_aries
ENSCJAG00000044880	LSM10	100	96.748	ENSPPAG00000023465	LSM10	100	96.748	Pan_paniscus
ENSCJAG00000044880	LSM10	100	91.870	ENSPPRG00000014619	LSM10	100	91.870	Panthera_pardus
ENSCJAG00000044880	LSM10	100	91.870	ENSPTIG00000004613	LSM10	100	91.870	Panthera_tigris_altaica
ENSCJAG00000044880	LSM10	100	96.748	ENSPTRG00000000539	LSM10	100	96.748	Pan_troglodytes
ENSCJAG00000044880	LSM10	100	96.748	ENSPANG00000023172	LSM10	100	96.748	Papio_anubis
ENSCJAG00000044880	LSM10	100	65.854	ENSPKIG00000003728	oscp1a	99	65.854	Paramormyrops_kingsleyae
ENSCJAG00000044880	LSM10	100	70.732	ENSPSIG00000000590	LSM10	100	70.732	Pelodiscus_sinensis
ENSCJAG00000044880	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSCJAG00000044880	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSCJAG00000044880	LSM10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSCJAG00000044880	LSM10	96	65.254	ENSPLAG00000016537	oscp1a	89	65.254	Poecilia_latipinna
ENSCJAG00000044880	LSM10	93	65.789	ENSPMEG00000000174	oscp1a	98	65.789	Poecilia_mexicana
ENSCJAG00000044880	LSM10	96	65.254	ENSPREG00000009899	oscp1a	89	65.254	Poecilia_reticulata
ENSCJAG00000044880	LSM10	100	97.561	ENSPPYG00000001539	LSM10	100	97.561	Pongo_abelii
ENSCJAG00000044880	LSM10	100	90.244	ENSPCAG00000002520	LSM10	100	90.244	Procavia_capensis
ENSCJAG00000044880	LSM10	100	90.244	ENSPVAG00000008644	LSM10	100	90.244	Pteropus_vampyrus
ENSCJAG00000044880	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSCJAG00000044880	LSM10	96	65.254	ENSPNAG00000028829	oscp1a	98	65.254	Pygocentrus_nattereri
ENSCJAG00000044880	LSM10	98	91.667	ENSRNOG00000025716	Lsm10	98	91.667	Rattus_norvegicus
ENSCJAG00000044880	LSM10	100	96.748	ENSRBIG00000001561	LSM10	100	96.748	Rhinopithecus_bieti
ENSCJAG00000044880	LSM10	100	96.748	ENSRROG00000011414	LSM10	100	96.748	Rhinopithecus_roxellana
ENSCJAG00000044880	LSM10	100	99.187	ENSSBOG00000036413	-	100	99.187	Saimiri_boliviensis_boliviensis
ENSCJAG00000044880	LSM10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSCJAG00000044880	LSM10	99	65.574	ENSSFOG00015019954	lsm10	100	65.574	Scleropages_formosus
ENSCJAG00000044880	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSCJAG00000044880	LSM10	99	63.415	ENSSDUG00000007090	oscp1a	100	63.415	Seriola_dumerili
ENSCJAG00000044880	LSM10	96	64.407	ENSSLDG00000000800	oscp1a	98	64.407	Seriola_lalandi_dorsalis
ENSCJAG00000044880	LSM10	100	87.200	ENSSARG00000004211	LSM10	100	88.800	Sorex_araneus
ENSCJAG00000044880	LSM10	94	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSCJAG00000044880	LSM10	100	89.431	ENSSSCG00000038916	LSM10	100	89.431	Sus_scrofa
ENSCJAG00000044880	LSM10	96	73.729	ENSTGUG00000001602	-	97	73.729	Taeniopygia_guttata
ENSCJAG00000044880	LSM10	96	73.729	ENSTGUG00000001600	-	97	73.729	Taeniopygia_guttata
ENSCJAG00000044880	LSM10	98	65.833	ENSTRUG00000010531	oscp1a	97	65.833	Takifugu_rubripes
ENSCJAG00000044880	LSM10	100	94.309	ENSTBEG00000016674	LSM10	100	94.309	Tupaia_belangeri
ENSCJAG00000044880	LSM10	100	89.431	ENSUAMG00000020265	LSM10	100	89.431	Ursus_americanus
ENSCJAG00000044880	LSM10	100	89.431	ENSUMAG00000001438	LSM10	57	89.431	Ursus_maritimus
ENSCJAG00000044880	LSM10	100	91.057	ENSVVUG00000023209	LSM10	100	91.057	Vulpes_vulpes
ENSCJAG00000044880	LSM10	100	68.293	ENSXETG00000027631	lsm10	100	68.293	Xenopus_tropicalis
ENSCJAG00000044880	LSM10	98	61.667	ENSXCOG00000018776	oscp1a	75	61.667	Xiphophorus_couchianus
ENSCJAG00000044880	LSM10	92	63.717	ENSXMAG00000019963	oscp1a	90	63.717	Xiphophorus_maculatus