EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000045284 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 2657 bases
Position: chrNTIC01014446.1:20320-22976
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000023892	RRM_1	PF00076.22	2.5e-14	1	1
ENSCJAP00000023803	RRM_1	PF00076.22	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000025275	PABPN1L-202	819	-	ENSCJAP00000023892	272 (aa)	-	F7GX20
ENSCJAT00000025180	PABPN1L-201	750	-	ENSCJAP00000023803	249 (aa)	-	F7DM56

Gene Model

Click here to download ENSCJAG00000045284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000045284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000045284	PABPN1L	52	61.074	ENSCJAG00000004407	-	86	56.140
ENSCJAG00000045284	PABPN1L	71	52.500	ENSCJAG00000007960	-	71	53.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000045284	PABPN1L	100	82.734	ENSG00000205022	PABPN1L	100	81.655	Homo_sapiens
ENSCJAG00000045284	PABPN1L	55	60.927	ENSAPOG00000000685	PABPN1L	57	56.150	Acanthochromis_polyacanthus
ENSCJAG00000045284	PABPN1L	55	60.265	ENSACIG00000021400	PABPN1L	85	60.127	Amphilophus_citrinellus
ENSCJAG00000045284	PABPN1L	60	52.761	ENSAOCG00000019844	PABPN1L	71	53.535	Amphiprion_ocellaris
ENSCJAG00000045284	PABPN1L	60	52.761	ENSAPEG00000019534	PABPN1L	71	53.535	Amphiprion_percula
ENSCJAG00000045284	PABPN1L	67	54.011	ENSATEG00000011646	PABPN1L	69	55.319	Anabas_testudineus
ENSCJAG00000045284	PABPN1L	70	58.462	ENSACAG00000013250	PABPN1L	99	58.462	Anolis_carolinensis
ENSCJAG00000045284	PABPN1L	100	89.855	ENSANAG00000038178	PABPN1L	100	89.855	Aotus_nancymaae
ENSCJAG00000045284	PABPN1L	72	53.500	ENSACLG00000025147	PABPN1L	71	54.315	Astatotilapia_calliptera
ENSCJAG00000045284	PABPN1L	59	55.215	ENSAMXG00000010873	PABPN1L	70	53.723	Astyanax_mexicanus
ENSCJAG00000045284	PABPN1L	91	63.745	ENSBTAG00000023752	-	100	62.724	Bos_taurus
ENSCJAG00000045284	PABPN1L	100	57.627	ENSCHIG00000013987	PABPN1L	100	56.803	Capra_hircus
ENSCJAG00000045284	PABPN1L	95	64.207	ENSCAPG00000007240	PABPN1L	100	63.333	Cavia_aperea
ENSCJAG00000045284	PABPN1L	100	65.704	ENSCPOG00000025951	PABPN1L	100	64.855	Cavia_porcellus
ENSCJAG00000045284	PABPN1L	100	92.754	ENSCCAG00000027631	PABPN1L	100	92.754	Cebus_capucinus
ENSCJAG00000045284	PABPN1L	100	82.246	ENSCATG00000031060	PABPN1L	100	81.884	Cercocebus_atys
ENSCJAG00000045284	PABPN1L	100	68.953	ENSCLAG00000000704	PABPN1L	100	68.116	Chinchilla_lanigera
ENSCJAG00000045284	PABPN1L	100	77.055	ENSCSAG00000002881	PABPN1L	100	76.712	Chlorocebus_sabaeus
ENSCJAG00000045284	PABPN1L	59	62.577	ENSCPBG00000023441	PABPN1L	61	58.673	Chrysemys_picta_bellii
ENSCJAG00000045284	PABPN1L	100	83.696	ENSCANG00000039336	PABPN1L	100	83.696	Colobus_angolensis_palliatus
ENSCJAG00000045284	PABPN1L	100	70.397	ENSCGRG00001013211	Pabpn1l	100	68.478	Cricetulus_griseus_chok1gshd
ENSCJAG00000045284	PABPN1L	100	70.397	ENSCGRG00000015868	Pabpn1l	100	68.478	Cricetulus_griseus_crigri
ENSCJAG00000045284	PABPN1L	60	54.878	ENSCSEG00000001142	pabpn1l	71	53.535	Cynoglossus_semilaevis
ENSCJAG00000045284	PABPN1L	100	58.123	ENSDNOG00000034677	PABPN1L	100	56.159	Dasypus_novemcinctus
ENSCJAG00000045284	PABPN1L	100	67.857	ENSEASG00005000777	PABPN1L	100	65.591	Equus_asinus_asinus
ENSCJAG00000045284	PABPN1L	100	68.571	ENSECAG00000000378	PABPN1L	100	66.308	Equus_caballus
ENSCJAG00000045284	PABPN1L	100	58.845	ENSEEUG00000004747	PABPN1L	100	56.159	Erinaceus_europaeus
ENSCJAG00000045284	PABPN1L	56	57.237	ENSELUG00000018385	PABPN1L	68	55.376	Esox_lucius
ENSCJAG00000045284	PABPN1L	100	61.089	ENSFCAG00000010465	PABPN1L	100	65.233	Felis_catus
ENSCJAG00000045284	PABPN1L	74	54.808	ENSFALG00000003319	PABPN1L	82	54.808	Ficedula_albicollis
ENSCJAG00000045284	PABPN1L	100	67.148	ENSFDAG00000021067	PABPN1L	100	67.148	Fukomys_damarensis
ENSCJAG00000045284	PABPN1L	60	53.988	ENSFHEG00000018295	PABPN1L	71	53.769	Fundulus_heteroclitus
ENSCJAG00000045284	PABPN1L	55	54.000	ENSGMOG00000001475	PABPN1L	67	53.684	Gadus_morhua
ENSCJAG00000045284	PABPN1L	61	61.628	ENSGALG00000006242	PABPN1L	97	61.850	Gallus_gallus
ENSCJAG00000045284	PABPN1L	55	56.688	ENSGACG00000015428	PABPN1L	72	52.709	Gasterosteus_aculeatus
ENSCJAG00000045284	PABPN1L	59	63.354	ENSGAGG00000010613	PABPN1L	53	63.354	Gopherus_agassizii
ENSCJAG00000045284	PABPN1L	100	82.609	ENSGGOG00000012670	PABPN1L	100	82.246	Gorilla_gorilla
ENSCJAG00000045284	PABPN1L	72	52.500	ENSHBUG00000002388	PABPN1L	71	54.545	Haplochromis_burtoni
ENSCJAG00000045284	PABPN1L	96	66.667	ENSHGLG00000014207	PABPN1L	100	67.424	Heterocephalus_glaber_female
ENSCJAG00000045284	PABPN1L	96	66.667	ENSHGLG00100005230	PABPN1L	100	67.424	Heterocephalus_glaber_male
ENSCJAG00000045284	PABPN1L	63	50.867	ENSHCOG00000004151	PABPN1L	72	52.195	Hippocampus_comes
ENSCJAG00000045284	PABPN1L	60	50.867	ENSIPUG00000023583	PABPN1L	88	51.546	Ictalurus_punctatus
ENSCJAG00000045284	PABPN1L	100	68.571	ENSSTOG00000020814	PABPN1L	100	65.950	Ictidomys_tridecemlineatus
ENSCJAG00000045284	PABPN1L	100	66.906	ENSJJAG00000006433	Pabpn1l	100	65.704	Jaculus_jaculus
ENSCJAG00000045284	PABPN1L	60	51.534	ENSLBEG00000011647	PABPN1L	69	53.266	Labrus_bergylta
ENSCJAG00000045284	PABPN1L	70	63.776	ENSLAFG00000025902	-	78	63.776	Loxodonta_africana
ENSCJAG00000045284	PABPN1L	100	82.609	ENSMFAG00000002924	PABPN1L	100	82.246	Macaca_fascicularis
ENSCJAG00000045284	PABPN1L	100	82.246	ENSMMUG00000012438	PABPN1L	100	81.884	Macaca_mulatta
ENSCJAG00000045284	PABPN1L	100	82.971	ENSMNEG00000044808	PABPN1L	100	82.609	Macaca_nemestrina
ENSCJAG00000045284	PABPN1L	100	82.609	ENSMLEG00000032667	PABPN1L	100	82.246	Mandrillus_leucophaeus
ENSCJAG00000045284	PABPN1L	72	53.500	ENSMZEG00005002186	PABPN1L	71	54.315	Maylandia_zebra
ENSCJAG00000045284	PABPN1L	100	64.855	ENSMAUG00000014032	Pabpn1l	100	65.530	Mesocricetus_auratus
ENSCJAG00000045284	PABPN1L	100	72.924	ENSMICG00000028179	PABPN1L	100	71.739	Microcebus_murinus
ENSCJAG00000045284	PABPN1L	100	66.426	ENSMOCG00000007955	Pabpn1l	100	63.768	Microtus_ochrogaster
ENSCJAG00000045284	PABPN1L	100	51.786	ENSMODG00000003873	-	100	51.071	Monodelphis_domestica
ENSCJAG00000045284	PABPN1L	62	53.846	ENSMALG00000016926	PABPN1L	71	53.030	Monopterus_albus
ENSCJAG00000045284	PABPN1L	100	64.130	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	61.455	Mus_caroli
ENSCJAG00000045284	PABPN1L	100	64.493	ENSMUSG00000069867	Pabpn1l	100	61.818	Mus_musculus
ENSCJAG00000045284	PABPN1L	100	65.217	MGP_PahariEiJ_G0023268	Pabpn1l	100	62.182	Mus_pahari
ENSCJAG00000045284	PABPN1L	100	64.130	MGP_SPRETEiJ_G0032788	Pabpn1l	100	61.455	Mus_spretus
ENSCJAG00000045284	PABPN1L	96	48.606	ENSMLUG00000003228	PABPN1L	84	53.659	Myotis_lucifugus
ENSCJAG00000045284	PABPN1L	100	68.592	ENSNGAG00000023992	Pabpn1l	100	65.217	Nannospalax_galili
ENSCJAG00000045284	PABPN1L	55	60.927	ENSNBRG00000017078	PABPN1L	72	56.284	Neolamprologus_brichardi
ENSCJAG00000045284	PABPN1L	100	67.266	ENSOPRG00000005597	PABPN1L	100	65.704	Ochotona_princeps
ENSCJAG00000045284	PABPN1L	100	60.140	ENSODEG00000004649	PABPN1L	100	58.246	Octodon_degus
ENSCJAG00000045284	PABPN1L	90	55.645	ENSOANG00000013901	PABPN1L	100	52.518	Ornithorhynchus_anatinus
ENSCJAG00000045284	PABPN1L	67	54.645	ENSORLG00000026560	PABPN1L	71	52.308	Oryzias_latipes
ENSCJAG00000045284	PABPN1L	67	54.645	ENSORLG00020015068	PABPN1L	71	52.308	Oryzias_latipes_hni
ENSCJAG00000045284	PABPN1L	67	54.645	ENSORLG00015000397	PABPN1L	71	52.308	Oryzias_latipes_hsok
ENSCJAG00000045284	PABPN1L	75	50.732	ENSOMEG00000017896	PABPN1L	51	52.551	Oryzias_melastigma
ENSCJAG00000045284	PABPN1L	100	73.646	ENSOGAG00000000433	PABPN1L	100	68.841	Otolemur_garnettii
ENSCJAG00000045284	PABPN1L	100	60.328	ENSOARG00000013682	PABPN1L	100	61.184	Ovis_aries
ENSCJAG00000045284	PABPN1L	100	82.374	ENSPPAG00000028866	PABPN1L	100	81.295	Pan_paniscus
ENSCJAG00000045284	PABPN1L	100	61.868	ENSPPRG00000015106	PABPN1L	100	65.591	Panthera_pardus
ENSCJAG00000045284	PABPN1L	92	64.143	ENSPTIG00000015606	PABPN1L	97	61.200	Panthera_tigris_altaica
ENSCJAG00000045284	PABPN1L	100	82.374	ENSPTRG00000031120	PABPN1L	100	81.295	Pan_troglodytes
ENSCJAG00000045284	PABPN1L	100	82.246	ENSPANG00000026039	PABPN1L	100	81.884	Papio_anubis
ENSCJAG00000045284	PABPN1L	69	54.774	ENSPSIG00000003404	PABPN1L	100	58.291	Pelodiscus_sinensis
ENSCJAG00000045284	PABPN1L	53	58.065	ENSPMGG00000013927	PABPN1L	71	61.417	Periophthalmus_magnuspinnatus
ENSCJAG00000045284	PABPN1L	100	69.314	ENSPEMG00000016624	Pabpn1l	100	66.667	Peromyscus_maniculatus_bairdii
ENSCJAG00000045284	PABPN1L	51	62.162	ENSPCIG00000007038	-	100	62.162	Phascolarctos_cinereus
ENSCJAG00000045284	PABPN1L	100	81.295	ENSPPYG00000007655	PABPN1L	100	80.935	Pongo_abelii
ENSCJAG00000045284	PABPN1L	100	70.290	ENSPCOG00000024077	PABPN1L	100	70.290	Propithecus_coquereli
ENSCJAG00000045284	PABPN1L	100	67.730	ENSPVAG00000002716	PABPN1L	100	66.667	Pteropus_vampyrus
ENSCJAG00000045284	PABPN1L	72	53.500	ENSPNYG00000004803	PABPN1L	71	54.315	Pundamilia_nyererei
ENSCJAG00000045284	PABPN1L	100	68.116	ENSRNOG00000029558	Pabpn1l	100	65.455	Rattus_norvegicus
ENSCJAG00000045284	PABPN1L	100	81.159	ENSRBIG00000030740	PABPN1L	100	80.797	Rhinopithecus_bieti
ENSCJAG00000045284	PABPN1L	100	80.797	ENSRROG00000032240	-	100	80.435	Rhinopithecus_roxellana
ENSCJAG00000045284	PABPN1L	99	82.909	ENSRROG00000035483	-	99	82.545	Rhinopithecus_roxellana
ENSCJAG00000045284	PABPN1L	100	92.029	ENSSBOG00000018410	PABPN1L	100	92.029	Saimiri_boliviensis_boliviensis
ENSCJAG00000045284	PABPN1L	100	50.338	ENSSHAG00000010001	-	100	51.220	Sarcophilus_harrisii
ENSCJAG00000045284	PABPN1L	60	54.268	ENSSMAG00000021348	PABPN1L	72	52.284	Scophthalmus_maximus
ENSCJAG00000045284	PABPN1L	60	51.534	ENSSDUG00000006986	PABPN1L	71	52.764	Seriola_dumerili
ENSCJAG00000045284	PABPN1L	60	52.147	ENSSLDG00000021845	PABPN1L	71	53.266	Seriola_lalandi_dorsalis
ENSCJAG00000045284	PABPN1L	94	51.172	ENSSARG00000005178	-	99	50.000	Sorex_araneus
ENSCJAG00000045284	PABPN1L	69	59.067	ENSSPUG00000007031	PABPN1L	84	59.278	Sphenodon_punctatus
ENSCJAG00000045284	PABPN1L	72	51.777	ENSSPAG00000017978	PABPN1L	71	53.266	Stegastes_partitus
ENSCJAG00000045284	PABPN1L	100	60.563	ENSSSCG00000036367	PABPN1L	100	66.197	Sus_scrofa
ENSCJAG00000045284	PABPN1L	60	52.121	ENSTRUG00000024725	PABPN1L	79	52.261	Takifugu_rubripes
ENSCJAG00000045284	PABPN1L	92	65.476	ENSTTRG00000004691	PABPN1L	100	66.308	Tursiops_truncatus
ENSCJAG00000045284	PABPN1L	57	55.280	ENSXETG00000011258	pabpn1l	96	51.887	Xenopus_tropicalis