EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000045570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 2153 bases
Position: chrNTIC01022223.1:100548146-100550298
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000063720	RRM_1	PF00076.22	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000084575	-	282	-	ENSCJAP00000063720	93 (aa)	-	A0A2R8MR19

Gene Model

Click here to download ENSCJAG00000045570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000045570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000045570	-	85	31.646	ENSCJAG00000007716	SF3B6	60	31.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000045570	-	92	97.674	ENSG00000077312	SNRPA	99	92.222	Homo_sapiens
ENSCJAG00000045570	-	84	69.231	ENSAPOG00000014688	-	81	69.231	Acanthochromis_polyacanthus
ENSCJAG00000045570	-	84	69.231	ENSAPOG00000015161	snrpb2	81	69.231	Acanthochromis_polyacanthus
ENSCJAG00000045570	-	92	91.860	ENSCAFG00000031370	-	52	91.860	Canis_familiaris
ENSCJAG00000045570	-	96	87.640	ENSCAFG00020024265	-	67	92.683	Canis_lupus_dingo
ENSCJAG00000045570	-	88	67.073	ENSCAFG00020011358	-	93	67.073	Canis_lupus_dingo
ENSCJAG00000045570	-	92	97.674	ENSCAFG00020014898	SNRPA	84	97.561	Canis_lupus_dingo
ENSCJAG00000045570	-	94	96.552	ENSCAFG00020017913	-	91	96.552	Canis_lupus_dingo
ENSCJAG00000045570	-	92	97.674	ENSCATG00000032716	SNRPA	88	93.182	Cercocebus_atys
ENSCJAG00000045570	-	92	97.674	ENSCANG00000038637	SNRPA	88	93.182	Colobus_angolensis_palliatus
ENSCJAG00000045570	-	92	97.674	ENSMFAG00000041710	SNRPA	88	93.182	Macaca_fascicularis
ENSCJAG00000045570	-	92	97.674	ENSMMUG00000022024	SNRPA	93	92.045	Macaca_mulatta
ENSCJAG00000045570	-	92	97.674	ENSMLEG00000039593	SNRPA	88	93.182	Mandrillus_leucophaeus
ENSCJAG00000045570	-	88	71.951	MGP_CAROLIEiJ_G0024372	Snrpb2	57	71.951	Mus_caroli
ENSCJAG00000045570	-	88	71.951	ENSMUSG00000008333	Snrpb2	57	71.951	Mus_musculus
ENSCJAG00000045570	-	88	71.951	MGP_PahariEiJ_G0025817	Snrpb2	57	71.951	Mus_pahari
ENSCJAG00000045570	-	88	71.951	MGP_SPRETEiJ_G0025291	Snrpb2	57	71.951	Mus_spretus
ENSCJAG00000045570	-	88	96.341	ENSODEG00000000626	-	83	96.341	Octodon_degus
ENSCJAG00000045570	-	92	97.674	ENSPANG00000023874	SNRPA	88	93.182	Papio_anubis
ENSCJAG00000045570	-	92	97.674	ENSPCOG00000025196	SNRPA	82	97.561	Propithecus_coquereli
ENSCJAG00000045570	-	92	97.674	ENSRBIG00000008335	SNRPA	88	93.182	Rhinopithecus_bieti
ENSCJAG00000045570	-	92	97.674	ENSRROG00000042727	SNRPA	88	93.182	Rhinopithecus_roxellana
ENSCJAG00000045570	-	92	33.721	YIR009W	MSL1	77	33.721	Saccharomyces_cerevisiae
ENSCJAG00000045570	-	92	97.674	ENSSBOG00000034722	SNRPA	62	92.222	Saimiri_boliviensis_boliviensis
ENSCJAG00000045570	-	95	92.045	ENSUAMG00000003002	-	96	92.045	Ursus_americanus
ENSCJAG00000045570	-	98	57.143	ENSUMAG00000000069	-	67	57.143	Ursus_maritimus
ENSCJAG00000045570	-	92	97.674	ENSVVUG00000005647	SNRPA	84	97.561	Vulpes_vulpes
ENSCJAG00000045570	-	96	86.517	ENSVVUG00000014183	-	73	91.463	Vulpes_vulpes
ENSCJAG00000045570	-	88	56.098	ENSXCOG00000012134	-	87	56.098	Xiphophorus_couchianus