EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000045953 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 2339 bases
Position: chrNTIC01035500.1:54903562-54905900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000061241	RRM_1	PF00076.22	9.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000079855	-	786	-	ENSCJAP00000061241	261 (aa)	-	A0A2R8MKM0

Gene Model

Click here to download ENSCJAG00000045953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000045953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000045953	-	52	63.025	ENSCJAG00000003665	PABPC5	73	63.025
ENSCJAG00000045953	-	92	90.123	ENSCJAG00000002512	-	77	90.164
ENSCJAG00000045953	-	76	66.000	ENSCJAG00000017628	PABPC1L	58	66.000
ENSCJAG00000045953	-	78	61.951	ENSCJAG00000045282	-	81	61.951
ENSCJAG00000045953	-	53	71.667	ENSCJAG00000045332	PABPC4L	65	71.667
ENSCJAG00000045953	-	90	66.525	ENSCJAG00000041162	-	95	66.525
ENSCJAG00000045953	-	89	65.289	ENSCJAG00000015833	PABPC1	80	62.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000045953	-	92	90.123	ENSG00000090621	PABPC4	86	87.727	Homo_sapiens
ENSCJAG00000045953	-	84	79.091	ENSAPOG00000001161	pabpc4	74	80.909	Acanthochromis_polyacanthus
ENSCJAG00000045953	-	92	82.721	ENSAMEG00000011535	-	78	82.784	Ailuropoda_melanoleuca
ENSCJAG00000045953	-	84	80.090	ENSACIG00000023343	pabpc4	73	81.900	Amphilophus_citrinellus
ENSCJAG00000045953	-	85	79.018	ENSAOCG00000021529	pabpc4	72	85.714	Amphiprion_ocellaris
ENSCJAG00000045953	-	85	79.018	ENSAPEG00000019196	pabpc4	74	80.804	Amphiprion_percula
ENSCJAG00000045953	-	89	76.068	ENSATEG00000007402	pabpc4	76	77.778	Anabas_testudineus
ENSCJAG00000045953	-	92	82.716	ENSAPLG00000009729	-	64	82.787	Anas_platyrhynchos
ENSCJAG00000045953	-	97	76.894	ENSACAG00000002544	PABPC4	75	76.894	Anolis_carolinensis
ENSCJAG00000045953	-	92	90.123	ENSANAG00000025079	PABPC4	77	90.164	Aotus_nancymaae
ENSCJAG00000045953	-	85	79.018	ENSACLG00000019558	pabpc4	74	80.804	Astatotilapia_calliptera
ENSCJAG00000045953	-	97	68.468	ENSAMXG00000018779	pabpc4	76	70.270	Astyanax_mexicanus
ENSCJAG00000045953	-	92	88.281	ENSBTAG00000017125	PABPC4	78	88.327	Bos_taurus
ENSCJAG00000045953	-	92	89.300	ENSCAFG00000003081	PABPC4	77	89.344	Canis_familiaris
ENSCJAG00000045953	-	92	89.300	ENSCAFG00020004161	PABPC4	78	82.784	Canis_lupus_dingo
ENSCJAG00000045953	-	89	72.581	ENSCHIG00000023385	-	63	72.581	Capra_hircus
ENSCJAG00000045953	-	92	82.721	ENSCHIG00000019398	-	78	82.784	Capra_hircus
ENSCJAG00000045953	-	93	89.754	ENSTSYG00000006532	PABPC4	77	89.754	Carlito_syrichta
ENSCJAG00000045953	-	92	89.712	ENSCAPG00000015984	PABPC4	78	89.754	Cavia_aperea
ENSCJAG00000045953	-	92	89.300	ENSCPOG00000009552	PABPC4	72	95.385	Cavia_porcellus
ENSCJAG00000045953	-	92	90.123	ENSCCAG00000037306	PABPC4	78	90.164	Cebus_capucinus
ENSCJAG00000045953	-	92	90.123	ENSCATG00000042164	PABPC4	77	90.164	Cercocebus_atys
ENSCJAG00000045953	-	92	88.889	ENSCLAG00000011899	PABPC4	77	88.889	Chinchilla_lanigera
ENSCJAG00000045953	-	92	83.824	ENSCSAG00000001135	PABPC4	78	83.883	Chlorocebus_sabaeus
ENSCJAG00000045953	-	74	92.268	ENSCHOG00000005327	PABPC4	59	92.268	Choloepus_hoffmanni
ENSCJAG00000045953	-	93	82.787	ENSCPBG00000001038	PABPC4	78	82.787	Chrysemys_picta_bellii
ENSCJAG00000045953	-	92	90.123	ENSCANG00000034177	PABPC4	78	90.164	Colobus_angolensis_palliatus
ENSCJAG00000045953	-	93	86.777	ENSCGRG00001018166	Pabpc4	75	90.521	Cricetulus_griseus_chok1gshd
ENSCJAG00000045953	-	93	86.777	ENSCGRG00000009777	Pabpc4	78	86.770	Cricetulus_griseus_crigri
ENSCJAG00000045953	-	90	75.309	ENSCSEG00000000130	pabpc4	76	78.541	Cynoglossus_semilaevis
ENSCJAG00000045953	-	90	75.207	ENSCVAG00000019246	pabpc4	75	80.357	Cyprinodon_variegatus
ENSCJAG00000045953	-	98	70.677	ENSDARG00000059259	pabpc4	84	72.180	Danio_rerio
ENSCJAG00000045953	-	92	89.712	ENSDNOG00000018444	-	72	89.754	Dasypus_novemcinctus
ENSCJAG00000045953	-	92	88.281	ENSDORG00000011581	Pabpc4	78	88.327	Dipodomys_ordii
ENSCJAG00000045953	-	92	81.985	ENSETEG00000018453	-	54	82.051	Echinops_telfairi
ENSCJAG00000045953	-	85	66.667	ENSEBUG00000000992	pabpc4	78	65.438	Eptatretus_burgeri
ENSCJAG00000045953	-	85	68.860	ENSEBUG00000013782	pabpc4	78	68.860	Eptatretus_burgeri
ENSCJAG00000045953	-	92	89.712	ENSEASG00005014119	PABPC4	78	83.516	Equus_asinus_asinus
ENSCJAG00000045953	-	92	89.712	ENSECAG00000009396	PABPC4	78	83.516	Equus_caballus
ENSCJAG00000045953	-	92	79.044	ENSEEUG00000002962	PABPC4	78	79.044	Erinaceus_europaeus
ENSCJAG00000045953	-	85	78.125	ENSELUG00000003195	pabpc4	73	79.911	Esox_lucius
ENSCJAG00000045953	-	92	89.300	ENSFCAG00000015254	-	77	89.344	Felis_catus
ENSCJAG00000045953	-	92	81.405	ENSFALG00000000543	PABPC4	78	81.481	Ficedula_albicollis
ENSCJAG00000045953	-	95	73.034	ENSFDAG00000010581	-	71	73.034	Fukomys_damarensis
ENSCJAG00000045953	-	92	83.088	ENSFDAG00000020016	-	78	83.150	Fukomys_damarensis
ENSCJAG00000045953	-	85	79.018	ENSFHEG00000007548	pabpc4	74	86.224	Fundulus_heteroclitus
ENSCJAG00000045953	-	97	69.847	ENSGMOG00000019025	pabpc4	79	71.374	Gadus_morhua
ENSCJAG00000045953	-	92	82.716	ENSGALG00000003800	PABPC4	78	82.787	Gallus_gallus
ENSCJAG00000045953	-	90	76.250	ENSGAFG00000018195	pabpc4	90	88.034	Gambusia_affinis
ENSCJAG00000045953	-	97	71.484	ENSGACG00000007179	pabpc4	73	79.111	Gasterosteus_aculeatus
ENSCJAG00000045953	-	93	82.787	ENSGAGG00000001888	PABPC4	78	82.787	Gopherus_agassizii
ENSCJAG00000045953	-	92	90.123	ENSGGOG00000004002	PABPC4	77	90.164	Gorilla_gorilla
ENSCJAG00000045953	-	85	79.018	ENSHBUG00000020206	pabpc4	74	80.804	Haplochromis_burtoni
ENSCJAG00000045953	-	92	89.300	ENSHGLG00000011162	PABPC4	77	89.344	Heterocephalus_glaber_female
ENSCJAG00000045953	-	92	89.300	ENSHGLG00100001580	PABPC4	77	89.344	Heterocephalus_glaber_male
ENSCJAG00000045953	-	85	78.475	ENSHCOG00000012694	pabpc4	71	84.615	Hippocampus_comes
ENSCJAG00000045953	-	97	68.939	ENSIPUG00000016620	pabpc4	80	70.455	Ictalurus_punctatus
ENSCJAG00000045953	-	92	88.382	ENSSTOG00000010416	PABPC4	78	88.327	Ictidomys_tridecemlineatus
ENSCJAG00000045953	-	92	86.420	ENSJJAG00000007781	Pabpc4	78	85.547	Jaculus_jaculus
ENSCJAG00000045953	-	85	79.556	ENSKMAG00000013597	pabpc4	76	81.308	Kryptolebias_marmoratus
ENSCJAG00000045953	-	85	79.018	ENSLBEG00000013654	pabpc4	74	80.804	Labrus_bergylta
ENSCJAG00000045953	-	92	79.098	ENSLACG00000011907	PABPC4	77	79.184	Latimeria_chalumnae
ENSCJAG00000045953	-	85	81.250	ENSLOCG00000001877	pabpc4	73	83.482	Lepisosteus_oculatus
ENSCJAG00000045953	-	92	88.382	ENSLAFG00000000151	PABPC4	77	88.430	Loxodonta_africana
ENSCJAG00000045953	-	92	90.123	ENSMFAG00000041481	PABPC4	77	90.164	Macaca_fascicularis
ENSCJAG00000045953	-	92	83.824	ENSMMUG00000007497	PABPC4	78	83.883	Macaca_mulatta
ENSCJAG00000045953	-	92	90.123	ENSMNEG00000043054	PABPC4	77	90.123	Macaca_nemestrina
ENSCJAG00000045953	-	92	90.123	ENSMLEG00000040716	PABPC4	77	90.164	Mandrillus_leucophaeus
ENSCJAG00000045953	-	85	79.018	ENSMAMG00000010025	pabpc4	78	80.804	Mastacembelus_armatus
ENSCJAG00000045953	-	85	78.571	ENSMZEG00005006141	pabpc4	73	85.204	Maylandia_zebra
ENSCJAG00000045953	-	96	78.486	ENSMGAG00000005408	PABPC4	68	78.486	Meleagris_gallopavo
ENSCJAG00000045953	-	80	85.096	ENSMAUG00000001295	-	97	85.096	Mesocricetus_auratus
ENSCJAG00000045953	-	92	88.797	ENSMICG00000016633	-	96	88.285	Microcebus_murinus
ENSCJAG00000045953	-	93	87.654	ENSMICG00000036729	-	76	87.654	Microcebus_murinus
ENSCJAG00000045953	-	92	88.066	ENSMOCG00000006763	Pabpc4	71	94.872	Microtus_ochrogaster
ENSCJAG00000045953	-	72	85.561	ENSMMOG00000002363	pabpc4	72	84.925	Mola_mola
ENSCJAG00000045953	-	51	67.742	ENSMODG00000018051	-	69	67.742	Monodelphis_domestica
ENSCJAG00000045953	-	93	75.185	ENSMODG00000017657	-	79	75.185	Monodelphis_domestica
ENSCJAG00000045953	-	85	79.018	ENSMALG00000011017	pabpc4	74	80.804	Monopterus_albus
ENSCJAG00000045953	-	92	81.618	MGP_CAROLIEiJ_G0026435	-	78	81.685	Mus_caroli
ENSCJAG00000045953	-	92	66.016	MGP_CAROLIEiJ_G0024864	-	73	65.283	Mus_caroli
ENSCJAG00000045953	-	92	87.654	ENSMUSG00000011257	Pabpc4	78	86.770	Mus_musculus
ENSCJAG00000045953	-	92	81.618	MGP_PahariEiJ_G0028765	Pabpc4	79	81.618	Mus_pahari
ENSCJAG00000045953	-	92	81.985	MGP_SPRETEiJ_G0027415	Pabpc4	71	82.051	Mus_spretus
ENSCJAG00000045953	-	92	83.088	ENSMPUG00000014414	-	78	83.150	Mustela_putorius_furo
ENSCJAG00000045953	-	92	88.797	ENSMLUG00000012068	PABPC4	77	88.843	Myotis_lucifugus
ENSCJAG00000045953	-	92	88.797	ENSNGAG00000018292	Pabpc4	78	88.716	Nannospalax_galili
ENSCJAG00000045953	-	68	83.616	ENSNBRG00000010047	-	75	83.616	Neolamprologus_brichardi
ENSCJAG00000045953	-	92	90.123	ENSNLEG00000011928	PABPC4	77	90.164	Nomascus_leucogenys
ENSCJAG00000045953	-	84	93.151	ENSOPRG00000011984	PABPC4	75	93.151	Ochotona_princeps
ENSCJAG00000045953	-	95	82.661	ENSODEG00000017434	-	90	82.661	Octodon_degus
ENSCJAG00000045953	-	92	88.889	ENSODEG00000006592	-	77	88.889	Octodon_degus
ENSCJAG00000045953	-	97	73.047	ENSONIG00000008176	pabpc4	79	74.609	Oreochromis_niloticus
ENSCJAG00000045953	-	93	81.967	ENSOANG00000010001	PABPC4	78	81.967	Ornithorhynchus_anatinus
ENSCJAG00000045953	-	92	82.721	ENSOCUG00000000562	PABPC4	72	82.784	Oryctolagus_cuniculus
ENSCJAG00000045953	-	85	78.571	ENSORLG00000017479	pabpc4	74	80.357	Oryzias_latipes
ENSCJAG00000045953	-	85	79.018	ENSORLG00020018644	pabpc4	72	85.204	Oryzias_latipes_hni
ENSCJAG00000045953	-	85	79.018	ENSORLG00015015042	pabpc4	74	80.804	Oryzias_latipes_hsok
ENSCJAG00000045953	-	85	79.018	ENSOMEG00000014410	pabpc4	73	85.714	Oryzias_melastigma
ENSCJAG00000045953	-	92	88.327	ENSOGAG00000004067	PABPC4	78	88.372	Otolemur_garnettii
ENSCJAG00000045953	-	92	82.721	ENSOARG00000020060	PABPC4	78	82.784	Ovis_aries
ENSCJAG00000045953	-	92	90.123	ENSPPAG00000043625	PABPC4	77	90.164	Pan_paniscus
ENSCJAG00000045953	-	92	89.300	ENSPPRG00000024727	PABPC4	77	89.344	Panthera_pardus
ENSCJAG00000045953	-	92	89.300	ENSPTIG00000005829	PABPC4	77	89.344	Panthera_tigris_altaica
ENSCJAG00000045953	-	92	90.123	ENSPTRG00000000573	PABPC4	77	90.164	Pan_troglodytes
ENSCJAG00000045953	-	92	90.123	ENSPANG00000009484	PABPC4	77	90.164	Papio_anubis
ENSCJAG00000045953	-	94	74.494	ENSPKIG00000025356	pabpc4	71	86.735	Paramormyrops_kingsleyae
ENSCJAG00000045953	-	93	83.197	ENSPSIG00000016892	PABPC4	78	83.197	Pelodiscus_sinensis
ENSCJAG00000045953	-	74	85.641	ENSPMGG00000009073	pabpc4	73	85.641	Periophthalmus_magnuspinnatus
ENSCJAG00000045953	-	92	88.066	ENSPEMG00000023569	-	77	88.115	Peromyscus_maniculatus_bairdii
ENSCJAG00000045953	-	92	85.830	ENSPEMG00000024193	-	77	85.887	Peromyscus_maniculatus_bairdii
ENSCJAG00000045953	-	97	60.000	ENSPMAG00000007885	pabpc4	72	60.000	Petromyzon_marinus
ENSCJAG00000045953	-	72	75.532	ENSPMAG00000002836	pabpc4	87	64.173	Petromyzon_marinus
ENSCJAG00000045953	-	93	83.197	ENSPCIG00000020674	PABPC4	78	83.197	Phascolarctos_cinereus
ENSCJAG00000045953	-	97	72.656	ENSPFOG00000002682	pabpc4	79	74.219	Poecilia_formosa
ENSCJAG00000045953	-	85	79.018	ENSPLAG00000010112	pabpc4	74	80.804	Poecilia_latipinna
ENSCJAG00000045953	-	97	72.656	ENSPMEG00000019739	pabpc4	79	74.219	Poecilia_mexicana
ENSCJAG00000045953	-	90	75.620	ENSPREG00000001589	pabpc4	74	80.804	Poecilia_reticulata
ENSCJAG00000045953	-	92	83.824	ENSPPYG00000001506	PABPC4	78	83.883	Pongo_abelii
ENSCJAG00000045953	-	92	71.324	ENSPCAG00000003341	PABPC4	78	71.429	Procavia_capensis
ENSCJAG00000045953	-	92	89.712	ENSPCOG00000023725	-	77	89.754	Propithecus_coquereli
ENSCJAG00000045953	-	99	77.692	ENSPCOG00000025882	-	89	78.125	Propithecus_coquereli
ENSCJAG00000045953	-	93	82.784	ENSPVAG00000002187	PABPC4	72	82.784	Pteropus_vampyrus
ENSCJAG00000045953	-	85	79.018	ENSPNYG00000006134	pabpc4	74	80.804	Pundamilia_nyererei
ENSCJAG00000045953	-	91	76.987	ENSPNAG00000024355	pabpc4	75	78.661	Pygocentrus_nattereri
ENSCJAG00000045953	-	92	87.500	ENSRNOG00000015642	Pabpc4	79	85.606	Rattus_norvegicus
ENSCJAG00000045953	-	92	85.156	ENSRNOG00000028592	AABR07035074.1	65	83.333	Rattus_norvegicus
ENSCJAG00000045953	-	92	90.123	ENSRBIG00000039761	PABPC4	77	90.164	Rhinopithecus_bieti
ENSCJAG00000045953	-	92	90.123	ENSRROG00000033355	PABPC4	77	90.164	Rhinopithecus_roxellana
ENSCJAG00000045953	-	92	90.123	ENSSBOG00000026193	PABPC4	78	90.164	Saimiri_boliviensis_boliviensis
ENSCJAG00000045953	-	93	83.197	ENSSHAG00000018139	PABPC4	78	83.197	Sarcophilus_harrisii
ENSCJAG00000045953	-	89	79.325	ENSSFOG00015023514	pabpc4	64	79.325	Scleropages_formosus
ENSCJAG00000045953	-	85	78.571	ENSSMAG00000009007	pabpc4	74	80.357	Scophthalmus_maximus
ENSCJAG00000045953	-	85	78.571	ENSSDUG00000012683	pabpc4	74	80.357	Seriola_dumerili
ENSCJAG00000045953	-	85	78.571	ENSSLDG00000013025	pabpc4	74	80.357	Seriola_lalandi_dorsalis
ENSCJAG00000045953	-	92	83.456	ENSSARG00000000310	PABPC4	68	83.516	Sorex_araneus
ENSCJAG00000045953	-	97	79.528	ENSSPUG00000003204	PABPC4	77	81.818	Sphenodon_punctatus
ENSCJAG00000045953	-	86	79.204	ENSSPAG00000009252	pabpc4	77	85.204	Stegastes_partitus
ENSCJAG00000045953	-	92	89.712	ENSSSCG00000003660	-	89	85.200	Sus_scrofa
ENSCJAG00000045953	-	93	53.282	ENSSSCG00000036170	-	81	54.545	Sus_scrofa
ENSCJAG00000045953	-	95	78.226	ENSTGUG00000001266	PABPC4	73	78.226	Taeniopygia_guttata
ENSCJAG00000045953	-	85	77.232	ENSTRUG00000005907	pabpc4	74	79.018	Takifugu_rubripes
ENSCJAG00000045953	-	82	71.362	ENSTNIG00000016902	pabpc4	66	86.747	Tetraodon_nigroviridis
ENSCJAG00000045953	-	92	80.515	ENSTBEG00000009035	PABPC4	62	80.586	Tupaia_belangeri
ENSCJAG00000045953	-	92	83.088	ENSTTRG00000014340	PABPC4	62	83.150	Tursiops_truncatus
ENSCJAG00000045953	-	92	89.300	ENSUAMG00000000303	PABPC4	77	89.344	Ursus_americanus
ENSCJAG00000045953	-	92	88.889	ENSUMAG00000019585	PABPC4	84	86.700	Ursus_maritimus
ENSCJAG00000045953	-	92	89.300	ENSVVUG00000005215	PABPC4	77	89.344	Vulpes_vulpes
ENSCJAG00000045953	-	94	76.735	ENSXETG00000010946	pabpc4	63	76.735	Xenopus_tropicalis
ENSCJAG00000045953	-	90	75.833	ENSXCOG00000013190	pabpc4	96	89.076	Xiphophorus_couchianus
ENSCJAG00000045953	-	85	79.018	ENSXMAG00000019007	pabpc4	74	80.804	Xiphophorus_maculatus