EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000046236 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 1476 bases
Position: chrNTIC01038833.1:49851082-49852557
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000055171	La	PF05383.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000082487	-	1476	-	ENSCJAP00000055171	491 (aa)	-	A0A2R8M7U8

Gene Model

Click here to download ENSCJAG00000046236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000046236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000046236	-	100	99.389	ENSCJAG00000018642	-	100	99.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000046236	-	100	97.963	ENSG00000166173	LARP6	100	100.000	Homo_sapiens
ENSCJAG00000046236	-	95	56.289	ENSAPOG00000021773	larp6a	67	56.289	Acanthochromis_polyacanthus
ENSCJAG00000046236	-	87	91.121	ENSAMEG00000008897	LARP6	100	91.121	Ailuropoda_melanoleuca
ENSCJAG00000046236	-	95	56.907	ENSACIG00000005166	larp6a	91	56.907	Amphilophus_citrinellus
ENSCJAG00000046236	-	95	56.289	ENSAOCG00000002284	larp6a	67	56.289	Amphiprion_ocellaris
ENSCJAG00000046236	-	95	56.289	ENSAPEG00000008077	larp6a	89	56.289	Amphiprion_percula
ENSCJAG00000046236	-	95	56.082	ENSATEG00000004018	larp6a	66	56.082	Anabas_testudineus
ENSCJAG00000046236	-	85	70.922	ENSAPLG00000009914	LARP6	99	70.922	Anas_platyrhynchos
ENSCJAG00000046236	-	84	67.711	ENSACAG00000008613	LARP6	97	67.711	Anolis_carolinensis
ENSCJAG00000046236	-	100	98.778	ENSANAG00000024860	LARP6	100	98.778	Aotus_nancymaae
ENSCJAG00000046236	-	95	56.701	ENSACLG00000018561	larp6a	65	56.701	Astatotilapia_calliptera
ENSCJAG00000046236	-	97	54.059	ENSAMXG00000029387	larp6a	73	56.137	Astyanax_mexicanus
ENSCJAG00000046236	-	83	41.505	ENSAMXG00000036816	-	93	41.404	Astyanax_mexicanus
ENSCJAG00000046236	-	100	91.870	ENSBTAG00000003915	LARP6	100	91.870	Bos_taurus
ENSCJAG00000046236	-	86	92.941	ENSCAFG00000017616	LARP6	99	92.941	Canis_familiaris
ENSCJAG00000046236	-	100	90.244	ENSCAFG00020007296	LARP6	100	91.057	Canis_lupus_dingo
ENSCJAG00000046236	-	100	91.870	ENSCHIG00000013742	LARP6	100	91.870	Capra_hircus
ENSCJAG00000046236	-	86	92.941	ENSTSYG00000028124	LARP6	87	92.941	Carlito_syrichta
ENSCJAG00000046236	-	86	90.802	ENSCAPG00000015452	LARP6	99	90.802	Cavia_aperea
ENSCJAG00000046236	-	100	90.061	ENSCPOG00000022687	LARP6	100	90.061	Cavia_porcellus
ENSCJAG00000046236	-	100	97.760	ENSCCAG00000036320	LARP6	100	97.760	Cebus_capucinus
ENSCJAG00000046236	-	100	98.167	ENSCATG00000042432	LARP6	100	98.167	Cercocebus_atys
ENSCJAG00000046236	-	100	92.292	ENSCLAG00000007893	LARP6	100	92.292	Chinchilla_lanigera
ENSCJAG00000046236	-	100	98.167	ENSCSAG00000013672	LARP6	100	98.167	Chlorocebus_sabaeus
ENSCJAG00000046236	-	97	92.259	ENSCHOG00000003318	LARP6	100	92.259	Choloepus_hoffmanni
ENSCJAG00000046236	-	88	69.838	ENSCPBG00000010771	LARP6	90	66.458	Chrysemys_picta_bellii
ENSCJAG00000046236	-	86	98.585	ENSCANG00000025833	LARP6	100	98.585	Colobus_angolensis_palliatus
ENSCJAG00000046236	-	100	90.650	ENSCGRG00001024472	Larp6	100	90.650	Cricetulus_griseus_chok1gshd
ENSCJAG00000046236	-	100	90.650	ENSCGRG00000004527	Larp6	100	90.650	Cricetulus_griseus_crigri
ENSCJAG00000046236	-	95	56.405	ENSCSEG00000011196	larp6a	69	56.405	Cynoglossus_semilaevis
ENSCJAG00000046236	-	87	58.202	ENSCVAG00000009605	larp6a	69	55.876	Cyprinodon_variegatus
ENSCJAG00000046236	-	87	58.036	ENSDARG00000005355	larp6a	97	61.033	Danio_rerio
ENSCJAG00000046236	-	100	92.480	ENSDNOG00000042993	LARP6	100	92.886	Dasypus_novemcinctus
ENSCJAG00000046236	-	100	80.567	ENSDORG00000023910	Larp6	100	80.567	Dipodomys_ordii
ENSCJAG00000046236	-	79	90.400	ENSETEG00000020390	LARP6	78	90.400	Echinops_telfairi
ENSCJAG00000046236	-	100	94.106	ENSEASG00005005490	LARP6	73	94.106	Equus_asinus_asinus
ENSCJAG00000046236	-	100	93.902	ENSECAG00000014190	LARP6	100	93.902	Equus_caballus
ENSCJAG00000046236	-	88	57.906	ENSELUG00000007341	larp6a	69	55.714	Esox_lucius
ENSCJAG00000046236	-	100	92.276	ENSFCAG00000001361	LARP6	100	92.276	Felis_catus
ENSCJAG00000046236	-	88	68.182	ENSFALG00000012389	LARP6	99	65.625	Ficedula_albicollis
ENSCJAG00000046236	-	89	92.500	ENSFDAG00000019994	LARP6	86	92.500	Fukomys_damarensis
ENSCJAG00000046236	-	87	58.202	ENSFHEG00000010312	larp6a	67	55.876	Fundulus_heteroclitus
ENSCJAG00000046236	-	97	67.432	ENSGALG00000004046	LARP6	94	68.058	Gallus_gallus
ENSCJAG00000046236	-	87	58.427	ENSGAFG00000009426	larp6a	67	56.495	Gambusia_affinis
ENSCJAG00000046236	-	86	59.268	ENSGACG00000014622	larp6a	97	59.268	Gasterosteus_aculeatus
ENSCJAG00000046236	-	90	65.766	ENSGAGG00000010802	LARP6	64	65.766	Gopherus_agassizii
ENSCJAG00000046236	-	86	98.349	ENSGGOG00000024151	LARP6	100	98.349	Gorilla_gorilla
ENSCJAG00000046236	-	95	56.701	ENSHBUG00000021014	larp6a	65	56.701	Haplochromis_burtoni
ENSCJAG00000046236	-	100	91.919	ENSHGLG00000015112	LARP6	100	91.919	Heterocephalus_glaber_female
ENSCJAG00000046236	-	86	94.353	ENSHGLG00100013159	LARP6	100	94.353	Heterocephalus_glaber_male
ENSCJAG00000046236	-	95	55.031	ENSHCOG00000001241	larp6a	89	55.236	Hippocampus_comes
ENSCJAG00000046236	-	85	58.810	ENSIPUG00000010187	larp6	71	56.033	Ictalurus_punctatus
ENSCJAG00000046236	-	90	36.222	ENSIPUG00000002828	-	96	36.585	Ictalurus_punctatus
ENSCJAG00000046236	-	94	94.360	ENSSTOG00000024279	LARP6	100	94.360	Ictidomys_tridecemlineatus
ENSCJAG00000046236	-	100	88.415	ENSJJAG00000011013	Larp6	100	88.844	Jaculus_jaculus
ENSCJAG00000046236	-	87	59.417	ENSKMAG00000001702	larp6a	64	57.407	Kryptolebias_marmoratus
ENSCJAG00000046236	-	95	54.620	ENSLBEG00000000170	larp6a	89	54.620	Labrus_bergylta
ENSCJAG00000046236	-	96	65.190	ENSLACG00000018706	LARP6	88	65.190	Latimeria_chalumnae
ENSCJAG00000046236	-	83	41.469	ENSLACG00000002786	-	96	44.153	Latimeria_chalumnae
ENSCJAG00000046236	-	96	59.129	ENSLOCG00000014592	larp6a	69	59.336	Lepisosteus_oculatus
ENSCJAG00000046236	-	85	44.028	ENSLOCG00000008547	-	83	43.794	Lepisosteus_oculatus
ENSCJAG00000046236	-	91	92.841	ENSLAFG00000016343	LARP6	100	92.841	Loxodonta_africana
ENSCJAG00000046236	-	91	98.664	ENSMFAG00000035507	LARP6	100	98.664	Macaca_fascicularis
ENSCJAG00000046236	-	100	95.723	ENSMMUG00000004429	LARP6	100	95.723	Macaca_mulatta
ENSCJAG00000046236	-	100	98.371	ENSMNEG00000045335	LARP6	100	98.371	Macaca_nemestrina
ENSCJAG00000046236	-	86	98.585	ENSMLEG00000038587	LARP6	100	98.585	Mandrillus_leucophaeus
ENSCJAG00000046236	-	95	56.263	ENSMAMG00000005261	larp6a	66	56.263	Mastacembelus_armatus
ENSCJAG00000046236	-	95	56.701	ENSMZEG00005005774	larp6a	65	56.701	Maylandia_zebra
ENSCJAG00000046236	-	85	71.090	ENSMGAG00000005077	LARP6	99	71.090	Meleagris_gallopavo
ENSCJAG00000046236	-	100	90.244	ENSMAUG00000018486	Larp6	100	90.244	Mesocricetus_auratus
ENSCJAG00000046236	-	100	91.260	ENSMICG00000011234	LARP6	100	91.260	Microcebus_murinus
ENSCJAG00000046236	-	100	89.837	ENSMOCG00000010492	Larp6	100	89.837	Microtus_ochrogaster
ENSCJAG00000046236	-	95	57.231	ENSMMOG00000016284	larp6a	91	57.231	Mola_mola
ENSCJAG00000046236	-	97	74.375	ENSMODG00000009034	LARP6	93	74.583	Monodelphis_domestica
ENSCJAG00000046236	-	95	56.468	ENSMALG00000014439	larp6a	89	56.468	Monopterus_albus
ENSCJAG00000046236	-	98	91.304	MGP_CAROLIEiJ_G0032314	Larp6	98	91.304	Mus_caroli
ENSCJAG00000046236	-	100	90.447	ENSMUSG00000034839	Larp6	100	90.447	Mus_musculus
ENSCJAG00000046236	-	100	89.634	MGP_PahariEiJ_G0015180	Larp6	100	89.634	Mus_pahari
ENSCJAG00000046236	-	100	90.244	MGP_SPRETEiJ_G0033452	Larp6	100	90.244	Mus_spretus
ENSCJAG00000046236	-	87	91.822	ENSMPUG00000017086	LARP6	100	91.822	Mustela_putorius_furo
ENSCJAG00000046236	-	100	93.496	ENSMLUG00000010319	LARP6	100	93.496	Myotis_lucifugus
ENSCJAG00000046236	-	100	89.837	ENSNGAG00000014238	Larp6	100	89.837	Nannospalax_galili
ENSCJAG00000046236	-	95	56.701	ENSNBRG00000008120	larp6a	90	56.701	Neolamprologus_brichardi
ENSCJAG00000046236	-	100	97.760	ENSNLEG00000013691	LARP6	100	97.760	Nomascus_leucogenys
ENSCJAG00000046236	-	85	75.978	ENSMEUG00000002270	LARP6	98	66.119	Notamacropus_eugenii
ENSCJAG00000046236	-	71	79.772	ENSOPRG00000004868	-	99	79.772	Ochotona_princeps
ENSCJAG00000046236	-	100	87.627	ENSODEG00000015958	LARP6	100	87.627	Octodon_degus
ENSCJAG00000046236	-	95	56.674	ENSONIG00000002901	larp6a	90	56.674	Oreochromis_niloticus
ENSCJAG00000046236	-	86	82.742	ENSOCUG00000009306	LARP6	99	82.742	Oryctolagus_cuniculus
ENSCJAG00000046236	-	96	56.996	ENSORLG00000014256	larp6a	92	56.996	Oryzias_latipes
ENSCJAG00000046236	-	96	56.996	ENSORLG00020019657	larp6a	67	56.996	Oryzias_latipes_hni
ENSCJAG00000046236	-	96	56.996	ENSORLG00015017915	larp6a	67	56.996	Oryzias_latipes_hsok
ENSCJAG00000046236	-	96	57.407	ENSOMEG00000017049	larp6a	68	57.407	Oryzias_melastigma
ENSCJAG00000046236	-	100	91.260	ENSOGAG00000000522	LARP6	100	91.260	Otolemur_garnettii
ENSCJAG00000046236	-	87	91.822	ENSOARG00000018750	LARP6	99	91.822	Ovis_aries
ENSCJAG00000046236	-	86	98.349	ENSPPAG00000031247	LARP6	100	98.349	Pan_paniscus
ENSCJAG00000046236	-	100	91.667	ENSPPRG00000011282	LARP6	100	91.667	Panthera_pardus
ENSCJAG00000046236	-	86	92.941	ENSPTIG00000015318	LARP6	86	92.941	Panthera_tigris_altaica
ENSCJAG00000046236	-	100	97.963	ENSPTRG00000007234	LARP6	100	97.963	Pan_troglodytes
ENSCJAG00000046236	-	100	98.371	ENSPANG00000016362	LARP6	100	98.371	Papio_anubis
ENSCJAG00000046236	-	97	55.489	ENSPKIG00000004511	LARP6	71	55.489	Paramormyrops_kingsleyae
ENSCJAG00000046236	-	96	59.667	ENSPKIG00000020103	larp6a	89	59.875	Paramormyrops_kingsleyae
ENSCJAG00000046236	-	61	80.769	ENSPSIG00000009071	LARP6	89	74.783	Pelodiscus_sinensis
ENSCJAG00000046236	-	95	57.320	ENSPMGG00000006958	larp6a	92	57.320	Periophthalmus_magnuspinnatus
ENSCJAG00000046236	-	100	90.650	ENSPEMG00000012909	Larp6	100	90.650	Peromyscus_maniculatus_bairdii
ENSCJAG00000046236	-	97	75.833	ENSPCIG00000020765	LARP6	93	76.042	Phascolarctos_cinereus
ENSCJAG00000046236	-	87	59.060	ENSPFOG00000014175	larp6a	90	57.084	Poecilia_formosa
ENSCJAG00000046236	-	87	59.101	ENSPLAG00000011105	larp6a	66	56.701	Poecilia_latipinna
ENSCJAG00000046236	-	87	58.876	ENSPMEG00000011085	larp6a	67	56.495	Poecilia_mexicana
ENSCJAG00000046236	-	87	58.652	ENSPREG00000008067	larp6a	67	56.907	Poecilia_reticulata
ENSCJAG00000046236	-	100	97.963	ENSPPYG00000006604	LARP6	100	97.963	Pongo_abelii
ENSCJAG00000046236	-	64	93.333	ENSPCAG00000014197	LARP6	76	93.333	Procavia_capensis
ENSCJAG00000046236	-	100	91.667	ENSPCOG00000022934	LARP6	100	91.667	Propithecus_coquereli
ENSCJAG00000046236	-	100	92.683	ENSPVAG00000005618	LARP6	100	92.683	Pteropus_vampyrus
ENSCJAG00000046236	-	95	56.701	ENSPNYG00000009835	larp6a	90	56.701	Pundamilia_nyererei
ENSCJAG00000046236	-	87	57.271	ENSPNAG00000017966	larp6a	78	56.352	Pygocentrus_nattereri
ENSCJAG00000046236	-	100	89.228	ENSRNOG00000012438	Larp6	100	89.228	Rattus_norvegicus
ENSCJAG00000046236	-	99	94.274	ENSRBIG00000032902	LARP6	99	94.274	Rhinopithecus_bieti
ENSCJAG00000046236	-	99	98.140	ENSRROG00000043074	LARP6	99	98.140	Rhinopithecus_roxellana
ENSCJAG00000046236	-	86	98.821	ENSSBOG00000024190	LARP6	100	98.821	Saimiri_boliviensis_boliviensis
ENSCJAG00000046236	-	87	74.533	ENSSHAG00000018495	LARP6	100	74.533	Sarcophilus_harrisii
ENSCJAG00000046236	-	95	51.464	ENSSFOG00015002254	LARP6	89	52.929	Scleropages_formosus
ENSCJAG00000046236	-	87	58.371	ENSSFOG00015023268	larp6a	92	57.551	Scleropages_formosus
ENSCJAG00000046236	-	95	56.818	ENSSMAG00000009953	larp6a	66	56.818	Scophthalmus_maximus
ENSCJAG00000046236	-	95	56.790	ENSSDUG00000007438	larp6a	66	56.790	Seriola_dumerili
ENSCJAG00000046236	-	95	56.790	ENSSLDG00000016647	larp6a	66	56.790	Seriola_lalandi_dorsalis
ENSCJAG00000046236	-	86	70.853	ENSSPUG00000011312	LARP6	99	70.853	Sphenodon_punctatus
ENSCJAG00000046236	-	95	56.289	ENSSPAG00000020502	larp6a	66	56.289	Stegastes_partitus
ENSCJAG00000046236	-	100	92.480	ENSSSCG00000004974	LARP6	100	92.480	Sus_scrofa
ENSCJAG00000046236	-	85	69.905	ENSTGUG00000005808	LARP6	99	69.905	Taeniopygia_guttata
ENSCJAG00000046236	-	95	56.379	ENSTRUG00000003151	larp6a	69	56.584	Takifugu_rubripes
ENSCJAG00000046236	-	95	55.394	ENSTNIG00000011926	larp6a	94	55.765	Tetraodon_nigroviridis
ENSCJAG00000046236	-	86	91.706	ENSTBEG00000015077	LARP6	99	91.706	Tupaia_belangeri
ENSCJAG00000046236	-	97	83.299	ENSUAMG00000010467	LARP6	96	83.299	Ursus_americanus
ENSCJAG00000046236	-	92	89.135	ENSVVUG00000015227	LARP6	99	89.135	Vulpes_vulpes
ENSCJAG00000046236	-	95	66.596	ENSXETG00000020340	larp6	92	67.234	Xenopus_tropicalis
ENSCJAG00000046236	-	87	58.652	ENSXCOG00000012654	larp6a	94	56.701	Xiphophorus_couchianus
ENSCJAG00000046236	-	87	58.652	ENSXMAG00000021015	larp6a	64	56.289	Xiphophorus_maculatus