EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000047538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 1707 bases
Position: chrNTIC01033278.1:116293112-116294818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000059629	RRM_1	PF00076.22	1.6e-19	1	1
ENSCJAP00000059629	HnRNPA1	PF11627.8	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000074441	-	1587	-	ENSCJAP00000059629	270 (aa)	-	A0A2R8MH08

Gene Model

Click here to download ENSCJAG00000047538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000047538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000047538	-	70	55.789	ENSCJAG00000045231	-	52	57.368
ENSCJAG00000047538	-	79	74.286	ENSCJAG00000018864	-	85	68.534
ENSCJAG00000047538	-	50	77.037	ENSCJAG00000047153	-	85	66.810
ENSCJAG00000047538	-	52	36.296	ENSCJAG00000013998	MSI2	68	37.121
ENSCJAG00000047538	-	50	40.769	ENSCJAG00000015165	HNRNPD	53	40.278
ENSCJAG00000047538	-	55	67.550	ENSCJAG00000041746	-	90	63.536
ENSCJAG00000047538	-	50	38.961	ENSCJAG00000012235	HNRNPAB	62	38.961
ENSCJAG00000047538	-	55	32.026	ENSCJAG00000002381	TARDBP	64	32.192
ENSCJAG00000047538	-	93	83.083	ENSCJAG00000007908	HNRNPA2B1	89	83.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000047538	-	70	97.368	ENSG00000122566	HNRNPA2B1	93	79.211	Homo_sapiens
ENSCJAG00000047538	-	70	97.368	ENSAMEG00000005983	HNRNPA2B1	89	79.211	Ailuropoda_melanoleuca
ENSCJAG00000047538	-	70	95.263	ENSAPLG00000012019	HNRNPA2B1	89	77.778	Anas_platyrhynchos
ENSCJAG00000047538	-	63	97.059	ENSACAG00000012992	HNRNPA2B1	88	83.137	Anolis_carolinensis
ENSCJAG00000047538	-	94	87.500	ENSANAG00000020524	-	88	87.660	Aotus_nancymaae
ENSCJAG00000047538	-	95	97.665	ENSANAG00000033016	HNRNPA2B1	97	97.665	Aotus_nancymaae
ENSCJAG00000047538	-	95	97.665	ENSBTAG00000005726	HNRNPA2B1	94	97.665	Bos_taurus
ENSCJAG00000047538	-	89	57.544	ENSBTAG00000038680	-	50	80.272	Bos_taurus
ENSCJAG00000047538	-	51	80.576	ENSBTAG00000054873	-	75	80.576	Bos_taurus
ENSCJAG00000047538	-	93	56.146	ENSBTAG00000011195	-	59	73.626	Bos_taurus
ENSCJAG00000047538	-	59	84.375	ENSBTAG00000053612	-	62	81.818	Bos_taurus
ENSCJAG00000047538	-	89	98.340	ENSBTAG00000051697	-	100	98.340	Bos_taurus
ENSCJAG00000047538	-	70	97.368	ENSCAFG00000002885	HNRNPA2B1	93	79.570	Canis_familiaris
ENSCJAG00000047538	-	70	97.368	ENSCAFG00020003488	HNRNPA2B1	93	79.211	Canis_lupus_dingo
ENSCJAG00000047538	-	54	79.592	ENSCHIG00000026095	-	88	59.690	Capra_hircus
ENSCJAG00000047538	-	93	55.814	ENSCHIG00000015804	-	62	73.481	Capra_hircus
ENSCJAG00000047538	-	71	71.000	ENSCHIG00000008431	-	72	75.000	Capra_hircus
ENSCJAG00000047538	-	86	60.305	ENSCHIG00000011148	-	53	72.000	Capra_hircus
ENSCJAG00000047538	-	70	98.404	ENSCHIG00000022444	HNRNPA2B1	93	79.211	Capra_hircus
ENSCJAG00000047538	-	65	88.636	ENSCHIG00000011000	-	81	74.725	Capra_hircus
ENSCJAG00000047538	-	85	90.830	ENSTSYG00000008124	HNRNPA2B1	89	84.583	Carlito_syrichta
ENSCJAG00000047538	-	70	97.368	ENSCPOG00000036630	HNRNPA2B1	93	79.211	Cavia_porcellus
ENSCJAG00000047538	-	94	85.490	ENSCCAG00000029074	HNRNPA2B1	89	89.224	Cebus_capucinus
ENSCJAG00000047538	-	85	90.393	ENSCATG00000033325	HNRNPA2B1	93	79.211	Cercocebus_atys
ENSCJAG00000047538	-	95	97.665	ENSCLAG00000014058	HNRNPA2B1	97	97.665	Chinchilla_lanigera
ENSCJAG00000047538	-	85	77.903	ENSCLAG00000016182	-	91	75.090	Chinchilla_lanigera
ENSCJAG00000047538	-	70	97.368	ENSCSAG00000014175	HNRNPA2B1	89	79.211	Chlorocebus_sabaeus
ENSCJAG00000047538	-	86	82.470	ENSCSAG00000005140	-	97	83.665	Chlorocebus_sabaeus
ENSCJAG00000047538	-	95	84.175	ENSCHOG00000013832	HNRNPA2B1	98	80.667	Choloepus_hoffmanni
ENSCJAG00000047538	-	95	97.665	ENSCPBG00000022485	HNRNPA2B1	95	97.665	Chrysemys_picta_bellii
ENSCJAG00000047538	-	94	84.884	ENSCANG00000028734	HNRNPA2B1	89	89.224	Colobus_angolensis_palliatus
ENSCJAG00000047538	-	95	97.665	ENSCGRG00001022416	-	97	97.665	Cricetulus_griseus_chok1gshd
ENSCJAG00000047538	-	95	97.665	ENSCGRG00000015964	-	98	97.665	Cricetulus_griseus_crigri
ENSCJAG00000047538	-	86	80.882	ENSDNOG00000012928	-	89	78.929	Dasypus_novemcinctus
ENSCJAG00000047538	-	70	97.368	ENSDNOG00000046740	-	94	78.853	Dasypus_novemcinctus
ENSCJAG00000047538	-	81	64.981	ENSDNOG00000043784	-	76	62.109	Dasypus_novemcinctus
ENSCJAG00000047538	-	95	97.665	ENSDORG00000005482	Hnrnpa2b1	97	97.665	Dipodomys_ordii
ENSCJAG00000047538	-	70	98.404	ENSETEG00000018577	HNRNPA2B1	64	97.368	Echinops_telfairi
ENSCJAG00000047538	-	67	73.333	ENSEEUG00000014880	HNRNPA2B1	90	63.082	Erinaceus_europaeus
ENSCJAG00000047538	-	70	97.368	ENSFCAG00000027765	HNRNPA2B1	93	79.211	Felis_catus
ENSCJAG00000047538	-	50	62.500	ENSFCAG00000036293	-	63	62.500	Felis_catus
ENSCJAG00000047538	-	70	95.263	ENSFALG00000009527	HNRNPA2B1	92	77.778	Ficedula_albicollis
ENSCJAG00000047538	-	95	97.665	ENSFDAG00000000793	HNRNPA2B1	97	97.665	Fukomys_damarensis
ENSCJAG00000047538	-	86	89.712	ENSGALG00000011036	HNRNPA2B1	87	90.574	Gallus_gallus
ENSCJAG00000047538	-	95	97.665	ENSGAGG00000006799	HNRNPA2B1	95	97.665	Gopherus_agassizii
ENSCJAG00000047538	-	94	84.884	ENSGGOG00000017072	HNRNPA2B1	89	89.655	Gorilla_gorilla
ENSCJAG00000047538	-	95	97.665	ENSHGLG00000015396	HNRNPA2B1	97	97.665	Heterocephalus_glaber_female
ENSCJAG00000047538	-	86	67.910	ENSHGLG00000010704	-	88	64.794	Heterocephalus_glaber_female
ENSCJAG00000047538	-	70	97.368	ENSHGLG00100004637	HNRNPA2B1	93	79.211	Heterocephalus_glaber_male
ENSCJAG00000047538	-	86	67.910	ENSHGLG00100009903	-	88	64.794	Heterocephalus_glaber_male
ENSCJAG00000047538	-	50	90.441	ENSSTOG00000034171	-	74	90.441	Ictidomys_tridecemlineatus
ENSCJAG00000047538	-	71	74.874	ENSSTOG00000029449	-	72	93.233	Ictidomys_tridecemlineatus
ENSCJAG00000047538	-	59	84.906	ENSSTOG00000025552	-	90	70.565	Ictidomys_tridecemlineatus
ENSCJAG00000047538	-	67	75.824	ENSSTOG00000026412	-	88	69.444	Ictidomys_tridecemlineatus
ENSCJAG00000047538	-	95	97.276	ENSSTOG00000006202	-	97	97.276	Ictidomys_tridecemlineatus
ENSCJAG00000047538	-	95	69.024	ENSSTOG00000024155	-	88	73.016	Ictidomys_tridecemlineatus
ENSCJAG00000047538	-	95	97.665	ENSJJAG00000000423	-	98	97.665	Jaculus_jaculus
ENSCJAG00000047538	-	88	86.555	ENSJJAG00000023126	-	88	87.190	Jaculus_jaculus
ENSCJAG00000047538	-	95	87.597	ENSJJAG00000012306	-	91	88.750	Jaculus_jaculus
ENSCJAG00000047538	-	88	86.975	ENSJJAG00000022256	-	87	91.150	Jaculus_jaculus
ENSCJAG00000047538	-	75	77.725	ENSJJAG00000016790	-	93	71.429	Jaculus_jaculus
ENSCJAG00000047538	-	75	92.118	ENSJJAG00000000278	-	86	79.570	Jaculus_jaculus
ENSCJAG00000047538	-	54	88.966	ENSJJAG00000013880	-	58	88.966	Jaculus_jaculus
ENSCJAG00000047538	-	66	80.337	ENSJJAG00000018972	-	94	62.313	Jaculus_jaculus
ENSCJAG00000047538	-	90	67.021	ENSLACG00000013590	HNRNPA2B1	78	83.333	Latimeria_chalumnae
ENSCJAG00000047538	-	70	97.368	ENSLAFG00000006902	HNRNPA2B1	99	78.689	Loxodonta_africana
ENSCJAG00000047538	-	100	80.952	ENSMFAG00000002536	HNRNPA2B1	93	79.211	Macaca_fascicularis
ENSCJAG00000047538	-	93	82.143	ENSMMUG00000003619	HNRNPA2B1	93	79.211	Macaca_mulatta
ENSCJAG00000047538	-	85	89.956	ENSMNEG00000029148	HNRNPA2B1	93	79.211	Macaca_nemestrina
ENSCJAG00000047538	-	86	89.610	ENSMLEG00000040848	HNRNPA2B1	93	79.211	Mandrillus_leucophaeus
ENSCJAG00000047538	-	70	95.263	ENSMGAG00000010635	HNRNPA2B1	93	77.778	Meleagris_gallopavo
ENSCJAG00000047538	-	85	87.773	ENSMAUG00000015003	-	86	87.069	Mesocricetus_auratus
ENSCJAG00000047538	-	95	97.665	ENSMAUG00000005706	-	97	97.665	Mesocricetus_auratus
ENSCJAG00000047538	-	94	72.318	ENSMICG00000002750	-	87	72.388	Microcebus_murinus
ENSCJAG00000047538	-	95	97.665	ENSMICG00000030570	HNRNPA2B1	94	97.665	Microcebus_murinus
ENSCJAG00000047538	-	89	82.258	ENSMOCG00000021250	-	90	85.892	Microtus_ochrogaster
ENSCJAG00000047538	-	95	97.665	ENSMOCG00000009258	-	97	97.665	Microtus_ochrogaster
ENSCJAG00000047538	-	70	96.842	ENSMODG00000000603	HNRNPA2B1	93	79.211	Monodelphis_domestica
ENSCJAG00000047538	-	100	97.276	MGP_CAROLIEiJ_G0028377	Hnrnpa2b1	97	97.276	Mus_caroli
ENSCJAG00000047538	-	95	97.276	ENSMUSG00000004980	Hnrnpa2b1	97	97.276	Mus_musculus
ENSCJAG00000047538	-	95	96.887	MGP_PahariEiJ_G0022127	Hnrnpa2b1	97	96.887	Mus_pahari
ENSCJAG00000047538	-	95	97.276	MGP_SPRETEiJ_G0029379	Hnrnpa2b1	97	97.276	Mus_spretus
ENSCJAG00000047538	-	95	97.665	ENSMPUG00000017012	-	97	97.665	Mustela_putorius_furo
ENSCJAG00000047538	-	70	97.368	ENSMPUG00000004554	HNRNPA2B1	89	79.211	Mustela_putorius_furo
ENSCJAG00000047538	-	95	82.295	ENSMLUG00000007578	HNRNPA2B1	93	76.655	Myotis_lucifugus
ENSCJAG00000047538	-	70	95.263	ENSMLUG00000028687	-	85	78.136	Myotis_lucifugus
ENSCJAG00000047538	-	95	96.887	ENSNGAG00000015156	-	97	96.887	Nannospalax_galili
ENSCJAG00000047538	-	50	65.441	ENSNGAG00000017267	-	55	65.441	Nannospalax_galili
ENSCJAG00000047538	-	55	60.526	ENSNGAG00000000224	-	56	61.074	Nannospalax_galili
ENSCJAG00000047538	-	64	91.379	ENSNGAG00000017486	-	94	74.721	Nannospalax_galili
ENSCJAG00000047538	-	100	81.319	ENSNLEG00000014918	HNRNPA2B1	93	79.211	Nomascus_leucogenys
ENSCJAG00000047538	-	64	74.286	ENSMEUG00000001826	-	51	73.714	Notamacropus_eugenii
ENSCJAG00000047538	-	70	96.842	ENSMEUG00000001084	HNRNPA2B1	93	78.853	Notamacropus_eugenii
ENSCJAG00000047538	-	71	96.891	ENSMEUG00000014479	-	88	96.891	Notamacropus_eugenii
ENSCJAG00000047538	-	67	97.778	ENSOPRG00000011698	HNRNPA2B1	69	79.710	Ochotona_princeps
ENSCJAG00000047538	-	70	92.553	ENSODEG00000000652	-	82	74.265	Octodon_degus
ENSCJAG00000047538	-	95	94.553	ENSODEG00000008757	-	97	94.553	Octodon_degus
ENSCJAG00000047538	-	87	73.004	ENSODEG00000005464	-	84	72.761	Octodon_degus
ENSCJAG00000047538	-	67	95.028	ENSODEG00000018537	-	92	77.419	Octodon_degus
ENSCJAG00000047538	-	91	72.065	ENSODEG00000009329	-	89	61.364	Octodon_degus
ENSCJAG00000047538	-	85	73.004	ENSODEG00000005746	-	68	91.791	Octodon_degus
ENSCJAG00000047538	-	70	96.842	ENSOANG00000009159	HNRNPA2B1	86	77.372	Ornithorhynchus_anatinus
ENSCJAG00000047538	-	70	97.340	ENSOCUG00000026859	HNRNPA2B1	89	78.853	Oryctolagus_cuniculus
ENSCJAG00000047538	-	70	97.368	ENSOGAG00000015353	HNRNPA2B1	89	79.211	Otolemur_garnettii
ENSCJAG00000047538	-	96	58.511	ENSOGAG00000031950	-	82	56.746	Otolemur_garnettii
ENSCJAG00000047538	-	54	79.592	ENSOARG00000016439	-	90	59.533	Ovis_aries
ENSCJAG00000047538	-	75	70.755	ENSOARG00000008025	-	67	75.610	Ovis_aries
ENSCJAG00000047538	-	68	87.027	ENSOARG00000005535	-	92	70.922	Ovis_aries
ENSCJAG00000047538	-	68	66.129	ENSOARG00000013811	-	79	66.304	Ovis_aries
ENSCJAG00000047538	-	54	78.912	ENSOARG00000003965	-	86	59.144	Ovis_aries
ENSCJAG00000047538	-	70	97.368	ENSOARG00000010132	HNRNPA2B1	89	79.211	Ovis_aries
ENSCJAG00000047538	-	90	63.571	ENSOARG00000001157	-	62	78.142	Ovis_aries
ENSCJAG00000047538	-	95	97.665	ENSPPAG00000037520	HNRNPA2B1	97	97.665	Pan_paniscus
ENSCJAG00000047538	-	70	97.368	ENSPPRG00000019212	HNRNPA2B1	93	79.211	Panthera_pardus
ENSCJAG00000047538	-	70	97.368	ENSPTIG00000019833	HNRNPA2B1	93	79.211	Panthera_tigris_altaica
ENSCJAG00000047538	-	77	66.346	ENSPTIG00000006805	-	75	73.864	Panthera_tigris_altaica
ENSCJAG00000047538	-	95	97.665	ENSPTRG00000019002	HNRNPA2B1	97	97.665	Pan_troglodytes
ENSCJAG00000047538	-	100	80.952	ENSPANG00000021598	HNRNPA2B1	93	79.211	Papio_anubis
ENSCJAG00000047538	-	86	90.984	ENSPSIG00000002659	HNRNPA2B1	83	91.837	Pelodiscus_sinensis
ENSCJAG00000047538	-	95	97.665	ENSPEMG00000014384	Hnrnpa2b1	97	97.665	Peromyscus_maniculatus_bairdii
ENSCJAG00000047538	-	66	59.887	ENSPMAG00000008270	HNRNPA2B1	78	63.265	Petromyzon_marinus
ENSCJAG00000047538	-	50	85.294	ENSPCIG00000013729	HNRNPA2B1	86	71.311	Phascolarctos_cinereus
ENSCJAG00000047538	-	70	97.368	ENSPPYG00000017715	HNRNPA2B1	89	79.211	Pongo_abelii
ENSCJAG00000047538	-	50	98.519	ENSPCOG00000026324	HNRNPA2B1	76	98.519	Propithecus_coquereli
ENSCJAG00000047538	-	70	97.368	ENSPVAG00000006296	HNRNPA2B1	93	79.211	Pteropus_vampyrus
ENSCJAG00000047538	-	95	97.665	ENSRNOG00000011175	Hnrnpa2b1	97	97.665	Rattus_norvegicus
ENSCJAG00000047538	-	85	80.000	ENSRBIG00000039719	-	88	79.310	Rhinopithecus_bieti
ENSCJAG00000047538	-	100	81.319	ENSRBIG00000015923	-	88	86.638	Rhinopithecus_bieti
ENSCJAG00000047538	-	65	94.886	ENSRROG00000008368	-	89	78.388	Rhinopithecus_roxellana
ENSCJAG00000047538	-	70	97.368	ENSRROG00000020443	-	93	79.211	Rhinopithecus_roxellana
ENSCJAG00000047538	-	86	89.177	ENSSBOG00000005245	HNRNPA2B1	89	83.884	Saimiri_boliviensis_boliviensis
ENSCJAG00000047538	-	86	79.044	ENSSHAG00000017930	HNRNPA2B1	92	77.419	Sarcophilus_harrisii
ENSCJAG00000047538	-	95	95.720	ENSSPUG00000015955	HNRNPA2B1	95	95.720	Sphenodon_punctatus
ENSCJAG00000047538	-	95	97.665	ENSSSCG00000036350	HNRNPA2B1	89	97.665	Sus_scrofa
ENSCJAG00000047538	-	93	55.709	ENSSSCG00000013611	-	81	49.071	Sus_scrofa
ENSCJAG00000047538	-	59	70.060	ENSSSCG00000012503	-	53	70.060	Sus_scrofa
ENSCJAG00000047538	-	91	68.085	ENSSSCG00000013607	-	89	70.696	Sus_scrofa
ENSCJAG00000047538	-	86	80.000	ENSTGUG00000002869	HNRNPA2B1	88	74.820	Taeniopygia_guttata
ENSCJAG00000047538	-	53	82.014	ENSTBEG00000003219	-	68	82.014	Tupaia_belangeri
ENSCJAG00000047538	-	70	98.404	ENSTTRG00000000709	HNRNPA2B1	84	79.211	Tursiops_truncatus
ENSCJAG00000047538	-	95	97.665	ENSUAMG00000025628	HNRNPA2B1	97	97.665	Ursus_americanus
ENSCJAG00000047538	-	95	97.665	ENSUMAG00000001699	HNRNPA2B1	82	97.665	Ursus_maritimus
ENSCJAG00000047538	-	70	94.149	ENSVPAG00000010417	HNRNPA2B1	93	77.061	Vicugna_pacos
ENSCJAG00000047538	-	70	97.368	ENSVVUG00000000484	HNRNPA2B1	93	79.211	Vulpes_vulpes
ENSCJAG00000047538	-	86	71.765	ENSXETG00000012170	hnrnpa2b1	89	72.266	Xenopus_tropicalis