EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000047602 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC4
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 1840 bases
Position: chrNTIC01007779.1:2659389-2661228
Accession: 108591261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000066658	DNA_RNApol_7kD	PF03604.13	4.1e-17	1	1
ENSCJAP00000056126	DNA_RNApol_7kD	PF03604.13	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000067627	-	177	-	ENSCJAP00000066658	58 (aa)	XP_017825228	F7H244
ENSCJAT00000071302	-	204	-	ENSCJAP00000056126	67 (aa)	-	A0A2R8M9U4

Gene Model

Click here to download ENSCJAG00000047602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000047602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000047602	-	100	100.000	ENSCJAG00000041308	-	82	100.000
ENSCJAG00000047602	-	100	100.000	ENSCJAG00000022168	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000047602	-	95	89.091	ENSACIG00000016512	-	94	88.136	Amphilophus_citrinellus
ENSCJAG00000047602	-	100	100.000	ENSANAG00000030050	-	100	100.000	Aotus_nancymaae
ENSCJAG00000047602	-	95	89.091	ENSACLG00000014734	-	100	91.525	Astatotilapia_calliptera
ENSCJAG00000047602	-	100	94.828	ENSAMXG00000031810	-	100	94.828	Astyanax_mexicanus
ENSCJAG00000047602	-	100	100.000	ENSTSYG00000003640	-	100	100.000	Carlito_syrichta
ENSCJAG00000047602	-	100	86.567	ENSCPBG00000008066	-	92	86.567	Chrysemys_picta_bellii
ENSCJAG00000047602	-	100	92.537	ENSDNOG00000007079	-	100	92.537	Dasypus_novemcinctus
ENSCJAG00000047602	-	99	68.116	ENSECAG00000034173	-	73	68.116	Equus_caballus
ENSCJAG00000047602	-	100	100.000	ENSFCAG00000039453	-	100	100.000	Felis_catus
ENSCJAG00000047602	-	98	85.965	ENSIPUG00000011172	-	90	83.607	Ictalurus_punctatus
ENSCJAG00000047602	-	100	100.000	ENSMFAG00000002096	-	100	100.000	Macaca_fascicularis
ENSCJAG00000047602	-	100	100.000	ENSMNEG00000042506	-	100	100.000	Macaca_nemestrina
ENSCJAG00000047602	-	95	89.091	ENSMGAG00000012237	-	95	96.364	Meleagris_gallopavo
ENSCJAG00000047602	-	95	89.091	ENSMALG00000005711	-	78	96.296	Monopterus_albus
ENSCJAG00000047602	-	100	100.000	ENSNLEG00000002993	-	100	100.000	Nomascus_leucogenys
ENSCJAG00000047602	-	95	90.909	ENSOANG00000028409	-	71	91.667	Ornithorhynchus_anatinus
ENSCJAG00000047602	-	95	87.273	ENSORLG00000002783	-	91	87.097	Oryzias_latipes
ENSCJAG00000047602	-	95	89.286	ENSORLG00020022085	-	59	92.727	Oryzias_latipes_hni
ENSCJAG00000047602	-	95	87.273	ENSOMEG00000013273	-	82	90.909	Oryzias_melastigma
ENSCJAG00000047602	-	100	91.045	ENSOGAG00000008422	-	100	91.045	Otolemur_garnettii
ENSCJAG00000047602	-	100	100.000	ENSPPRG00000024679	-	100	100.000	Panthera_pardus
ENSCJAG00000047602	-	100	100.000	ENSPTIG00000020210	-	100	100.000	Panthera_tigris_altaica
ENSCJAG00000047602	-	100	92.537	ENSPANG00000031381	-	100	92.537	Papio_anubis
ENSCJAG00000047602	-	93	88.889	ENSPKIG00000005853	-	81	92.593	Paramormyrops_kingsleyae
ENSCJAG00000047602	-	100	100.000	ENSPCIG00000000145	POLR2K	100	100.000	Phascolarctos_cinereus
ENSCJAG00000047602	-	93	88.889	ENSPFOG00000014835	-	100	94.444	Poecilia_formosa
ENSCJAG00000047602	-	95	89.091	ENSPLAG00000003022	-	81	92.727	Poecilia_latipinna
ENSCJAG00000047602	-	98	85.965	ENSPREG00000008685	-	85	85.714	Poecilia_reticulata
ENSCJAG00000047602	-	100	100.000	ENSPCOG00000019331	-	100	100.000	Propithecus_coquereli
ENSCJAG00000047602	-	100	100.000	ENSSBOG00000022710	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000047602	-	93	90.741	ENSSDUG00000011754	-	100	96.296	Seriola_dumerili
ENSCJAG00000047602	-	98	85.965	ENSSPAG00000019554	-	93	94.545	Stegastes_partitus
ENSCJAG00000047602	-	98	84.211	ENSTRUG00000023920	-	79	77.612	Takifugu_rubripes
ENSCJAG00000047602	-	98	89.474	ENSVVUG00000013043	-	95	100.000	Vulpes_vulpes
ENSCJAG00000047602	-	95	89.091	ENSXCOG00000020048	-	83	92.727	Xiphophorus_couchianus
ENSCJAG00000047602	-	95	89.091	ENSXMAG00000003702	-	80	92.727	Xiphophorus_maculatus