EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000000093 (Gene tree)
Gene ID: 102009564
Gene Symbol: -
Alias: -
Full Name: regulator of nonsense transcripts 3A-like
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 2499 bases
Position: chrJH722421.1:21-2519
Accession: 102009564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000000070	Smg4_UPF3	PF03467.15	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000000097	-	1447	XM_005415172	ENSCLAP00000000070	144 (aa)	XP_005415229	UPI00038F02F0

Gene Model

Click here to download ENSCLAG00000000093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000000093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000000093	-	97	73.050	ENSG00000169062	UPF3A	98	66.990	Homo_sapiens
ENSCLAG00000000093	-	97	68.794	ENSBTAG00000047365	-	64	68.794	Bos_taurus
ENSCLAG00000000093	-	51	83.562	ENSCPBG00000022854	-	56	83.562	Chrysemys_picta_bellii
ENSCLAG00000000093	-	60	54.651	ENSCING00000008396	-	54	54.651	Ciona_intestinalis
ENSCLAG00000000093	-	85	54.472	ENSFHEG00000010418	upf3a	72	54.472	Fundulus_heteroclitus
ENSCLAG00000000093	-	78	65.254	ENSGALG00000016815	-	66	64.138	Gallus_gallus
ENSCLAG00000000093	-	97	76.596	ENSSTOG00000030282	-	59	76.596	Ictidomys_tridecemlineatus
ENSCLAG00000000093	-	97	70.000	ENSJJAG00000018099	-	66	70.000	Jaculus_jaculus
ENSCLAG00000000093	-	99	67.832	ENSMICG00000042420	-	92	67.133	Microcebus_murinus
ENSCLAG00000000093	-	58	66.265	ENSNBRG00000011560	upf3b	56	66.265	Neolamprologus_brichardi
ENSCLAG00000000093	-	57	68.293	ENSNLEG00000014897	UPF3B	50	63.441	Nomascus_leucogenys
ENSCLAG00000000093	-	97	84.892	ENSODEG00000009176	-	55	84.892	Octodon_degus
ENSCLAG00000000093	-	70	57.843	ENSPKIG00000019226	upf3b	66	56.863	Paramormyrops_kingsleyae
ENSCLAG00000000093	-	86	72.800	ENSPCIG00000019590	-	60	68.310	Phascolarctos_cinereus
ENSCLAG00000000093	-	85	55.645	ENSPLAG00000011960	upf3a	65	55.645	Poecilia_latipinna
ENSCLAG00000000093	-	53	64.474	ENSPREG00000012214	upf3b	56	62.651	Poecilia_reticulata
ENSCLAG00000000093	-	85	55.645	ENSPREG00000005566	upf3a	66	55.645	Poecilia_reticulata
ENSCLAG00000000093	-	79	56.140	ENSSMAG00000003858	upf3a	56	69.048	Scophthalmus_maximus
ENSCLAG00000000093	-	85	55.285	ENSSDUG00000009680	upf3a	69	55.285	Seriola_dumerili
ENSCLAG00000000093	-	85	55.285	ENSSPAG00000007938	upf3a	50	55.963	Stegastes_partitus
ENSCLAG00000000093	-	53	63.158	ENSXCOG00000016586	upf3b	56	61.446	Xiphophorus_couchianus