EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000000284 (Gene tree)
Gene ID: 102026814
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 16850 bases
Position: chrJH722035.1:296977-313826
Accession: 102026814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000000329	TUDOR	PF00567.24	0.0001	1	1
ENSCLAP00000000330	TUDOR	PF00567.24	0.0001	1	1
ENSCLAP00000000331	TUDOR	PF00567.24	0.00012	1	1
ENSCLAP00000000331	SMN	PF06003.12	1.6e-102	1	1
ENSCLAP00000000329	SMN	PF06003.12	2.8e-88	1	2
ENSCLAP00000000329	SMN	PF06003.12	2.8e-88	2	2
ENSCLAP00000000330	SMN	PF06003.12	2.8e-88	1	2
ENSCLAP00000000330	SMN	PF06003.12	2.8e-88	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000000358	-	4541	XM_013509586	ENSCLAP00000000330	267 (aa)	XP_013365040	UPI00038EE190
ENSCLAT00000000359	-	2672	XM_005413921	ENSCLAP00000000331	295 (aa)	XP_005413978	UPI00038EC00B
ENSCLAT00000000357	-	5348	-	ENSCLAP00000000329	267 (aa)	-	UPI00038EE190

Gene Model

Click here to download ENSCLAG00000000284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000000284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000000284	-	99	80.000	ENSG00000172062	SMN1	99	80.000	Homo_sapiens
ENSCLAG00000000284	-	99	80.000	ENSG00000205571	SMN2	87	92.500	Homo_sapiens
ENSCLAG00000000284	-	92	52.536	ENSAPOG00000011324	smn1	94	51.636	Acanthochromis_polyacanthus
ENSCLAG00000000284	-	96	82.517	ENSAMEG00000003316	-	97	81.481	Ailuropoda_melanoleuca
ENSCLAG00000000284	-	88	50.373	ENSACIG00000019772	-	97	48.679	Amphilophus_citrinellus
ENSCLAG00000000284	-	92	52.500	ENSAOCG00000024444	smn1	94	50.362	Amphiprion_ocellaris
ENSCLAG00000000284	-	92	53.214	ENSAPEG00000016504	smn1	94	50.178	Amphiprion_percula
ENSCLAG00000000284	-	89	54.945	ENSATEG00000002182	smn1	79	53.903	Anabas_testudineus
ENSCLAG00000000284	-	66	56.345	ENSAPLG00000010912	-	96	56.410	Anas_platyrhynchos
ENSCLAG00000000284	-	99	53.872	ENSACAG00000010017	-	99	53.821	Anolis_carolinensis
ENSCLAG00000000284	-	99	77.926	ENSANAG00000032133	-	99	77.926	Aotus_nancymaae
ENSCLAG00000000284	-	89	52.000	ENSACLG00000007308	smn1	88	51.515	Astatotilapia_calliptera
ENSCLAG00000000284	-	55	55.102	ENSAMXG00000013884	smn1	97	47.312	Astyanax_mexicanus
ENSCLAG00000000284	-	96	78.947	ENSBTAG00000005743	SMN2	99	78.157	Bos_taurus
ENSCLAG00000000284	-	86	35.745	WBGene00004887	smn-1	82	73.913	Caenorhabditis_elegans
ENSCLAG00000000284	-	99	82.264	ENSCJAG00000016290	-	99	82.264	Callithrix_jacchus
ENSCLAG00000000284	-	96	80.986	ENSCAFG00000007812	SMN	100	79.461	Canis_familiaris
ENSCLAG00000000284	-	95	80.919	ENSCAFG00020019229	-	93	79.392	Canis_lupus_dingo
ENSCLAG00000000284	-	96	79.443	ENSCHIG00000015559	-	100	77.815	Capra_hircus
ENSCLAG00000000284	-	99	79.623	ENSTSYG00000012058	-	99	80.597	Carlito_syrichta
ENSCLAG00000000284	-	76	76.786	ENSCAPG00000011021	-	100	77.679	Cavia_aperea
ENSCLAG00000000284	-	100	88.255	ENSCPOG00000036973	-	100	87.248	Cavia_porcellus
ENSCLAG00000000284	-	99	90.541	ENSCPOG00000012328	-	100	89.527	Cavia_porcellus
ENSCLAG00000000284	-	99	80.755	ENSCCAG00000018127	-	99	80.755	Cebus_capucinus
ENSCLAG00000000284	-	99	80.377	ENSCATG00000037002	-	99	80.377	Cercocebus_atys
ENSCLAG00000000284	-	99	80.135	ENSCSAG00000015688	-	99	80.135	Chlorocebus_sabaeus
ENSCLAG00000000284	-	86	68.093	ENSCHOG00000007346	-	64	78.916	Choloepus_hoffmanni
ENSCLAG00000000284	-	97	60.554	ENSCPBG00000010968	-	96	59.848	Chrysemys_picta_bellii
ENSCLAG00000000284	-	99	81.132	ENSCANG00000038242	-	100	80.496	Colobus_angolensis_palliatus
ENSCLAG00000000284	-	99	72.932	ENSCANG00000033324	-	99	71.698	Colobus_angolensis_palliatus
ENSCLAG00000000284	-	100	75.839	ENSCGRG00001017959	-	100	75.839	Cricetulus_griseus_chok1gshd
ENSCLAG00000000284	-	100	59.661	ENSCGRG00001016998	-	100	59.661	Cricetulus_griseus_chok1gshd
ENSCLAG00000000284	-	100	75.839	ENSCGRG00000007698	Smn1	100	75.839	Cricetulus_griseus_crigri
ENSCLAG00000000284	-	92	45.017	ENSCSEG00000015227	smn1	97	47.552	Cynoglossus_semilaevis
ENSCLAG00000000284	-	93	52.098	ENSCVAG00000007498	smn1	95	50.909	Cyprinodon_variegatus
ENSCLAG00000000284	-	93	51.056	ENSDARG00000018494	smn1	95	50.909	Danio_rerio
ENSCLAG00000000284	-	83	78.776	ENSDNOG00000007283	-	100	78.776	Dasypus_novemcinctus
ENSCLAG00000000284	-	78	64.904	ENSDNOG00000045949	-	75	65.405	Dasypus_novemcinctus
ENSCLAG00000000284	-	100	71.044	ENSDORG00000007082	Smn1	99	71.044	Dipodomys_ordii
ENSCLAG00000000284	-	81	64.651	ENSETEG00000001406	-	89	63.212	Echinops_telfairi
ENSCLAG00000000284	-	93	40.714	ENSEBUG00000011902	smn1	98	40.203	Eptatretus_burgeri
ENSCLAG00000000284	-	89	72.388	ENSEASG00005018000	-	89	74.131	Equus_asinus_asinus
ENSCLAG00000000284	-	96	78.671	ENSECAG00000015215	-	100	77.592	Equus_caballus
ENSCLAG00000000284	-	86	74.409	ENSEEUG00000015777	-	100	69.291	Erinaceus_europaeus
ENSCLAG00000000284	-	92	54.839	ENSELUG00000018067	smn1	94	47.872	Esox_lucius
ENSCLAG00000000284	-	100	79.866	ENSFCAG00000028292	SMN	100	79.866	Felis_catus
ENSCLAG00000000284	-	91	58.889	ENSFALG00000012320	-	94	57.196	Ficedula_albicollis
ENSCLAG00000000284	-	100	84.797	ENSFDAG00000017683	-	100	84.797	Fukomys_damarensis
ENSCLAG00000000284	-	90	45.455	ENSFHEG00000018508	smn1	96	49.270	Fundulus_heteroclitus
ENSCLAG00000000284	-	95	51.429	ENSGMOG00000017279	smn1	95	48.175	Gadus_morhua
ENSCLAG00000000284	-	92	58.672	ENSGALG00000002430	SMN	95	57.196	Gallus_gallus
ENSCLAG00000000284	-	91	53.571	ENSGAFG00000009501	smn1	94	50.719	Gambusia_affinis
ENSCLAG00000000284	-	92	49.265	ENSGACG00000010584	smn1	91	53.137	Gasterosteus_aculeatus
ENSCLAG00000000284	-	96	59.790	ENSGAGG00000011374	-	96	58.803	Gopherus_agassizii
ENSCLAG00000000284	-	94	37.681	ENSGAGG00000013639	-	93	37.681	Gopherus_agassizii
ENSCLAG00000000284	-	99	67.170	ENSGGOG00000026704	-	88	78.238	Gorilla_gorilla
ENSCLAG00000000284	-	98	77.481	ENSGGOG00000003872	-	100	79.365	Gorilla_gorilla
ENSCLAG00000000284	-	92	50.352	ENSHBUG00000013987	smn1	94	51.648	Haplochromis_burtoni
ENSCLAG00000000284	-	100	84.797	ENSHGLG00000001018	-	100	84.797	Heterocephalus_glaber_female
ENSCLAG00000000284	-	100	80.405	ENSHGLG00000001905	-	100	80.743	Heterocephalus_glaber_female
ENSCLAG00000000284	-	100	84.797	ENSHGLG00100011252	-	100	84.797	Heterocephalus_glaber_male
ENSCLAG00000000284	-	96	79.577	ENSHGLG00100018676	-	100	79.930	Heterocephalus_glaber_male
ENSCLAG00000000284	-	88	48.897	ENSHCOG00000017136	smn1	87	46.067	Hippocampus_comes
ENSCLAG00000000284	-	94	47.959	ENSIPUG00000012580	smn1	86	45.936	Ictalurus_punctatus
ENSCLAG00000000284	-	95	80.142	ENSSTOG00000012288	-	100	80.142	Ictidomys_tridecemlineatus
ENSCLAG00000000284	-	67	62.570	ENSJJAG00000014853	-	85	62.428	Jaculus_jaculus
ENSCLAG00000000284	-	92	48.288	ENSKMAG00000007239	smn1	96	49.624	Kryptolebias_marmoratus
ENSCLAG00000000284	-	92	52.482	ENSLBEG00000022550	smn1	94	51.799	Labrus_bergylta
ENSCLAG00000000284	-	94	37.288	ENSLACG00000009808	-	96	37.667	Latimeria_chalumnae
ENSCLAG00000000284	-	91	54.000	ENSLOCG00000011339	smn1	93	52.245	Lepisosteus_oculatus
ENSCLAG00000000284	-	100	78.000	ENSLAFG00000003425	-	100	77.465	Loxodonta_africana
ENSCLAG00000000284	-	99	75.758	ENSMFAG00000008812	-	99	75.758	Macaca_fascicularis
ENSCLAG00000000284	-	99	81.509	ENSMFAG00000031523	SMN1	99	81.509	Macaca_fascicularis
ENSCLAG00000000284	-	99	75.084	ENSMMUG00000030594	-	99	75.084	Macaca_mulatta
ENSCLAG00000000284	-	99	81.509	ENSMMUG00000020214	SMN1	99	81.509	Macaca_mulatta
ENSCLAG00000000284	-	99	81.132	ENSMNEG00000035094	-	99	81.132	Macaca_nemestrina
ENSCLAG00000000284	-	74	68.778	ENSMNEG00000036423	-	86	68.326	Macaca_nemestrina
ENSCLAG00000000284	-	99	81.132	ENSMLEG00000041902	-	99	81.132	Mandrillus_leucophaeus
ENSCLAG00000000284	-	92	50.000	ENSMAMG00000011034	smn1	94	50.896	Mastacembelus_armatus
ENSCLAG00000000284	-	91	48.708	ENSMZEG00005013634	smn1	94	51.648	Maylandia_zebra
ENSCLAG00000000284	-	65	56.477	ENSMGAG00000008889	-	94	53.886	Meleagris_gallopavo
ENSCLAG00000000284	-	100	74.497	ENSMAUG00000010262	Smn1	100	74.497	Mesocricetus_auratus
ENSCLAG00000000284	-	100	66.667	ENSMICG00000034708	-	93	73.750	Microcebus_murinus
ENSCLAG00000000284	-	100	74.832	ENSMOCG00000017833	Smn1	100	74.832	Microtus_ochrogaster
ENSCLAG00000000284	-	92	47.101	ENSMMOG00000005504	smn1	93	51.301	Mola_mola
ENSCLAG00000000284	-	97	65.517	ENSMODG00000001436	-	97	65.517	Monodelphis_domestica
ENSCLAG00000000284	-	92	49.281	ENSMALG00000008025	smn1	94	50.181	Monopterus_albus
ENSCLAG00000000284	-	100	75.920	MGP_CAROLIEiJ_G0018836	Smn1	100	75.920	Mus_caroli
ENSCLAG00000000284	-	100	75.251	ENSMUSG00000021645	Smn1	100	75.585	Mus_musculus
ENSCLAG00000000284	-	100	74.411	MGP_PahariEiJ_G0015911	Smn1	100	74.747	Mus_pahari
ENSCLAG00000000284	-	100	74.916	MGP_SPRETEiJ_G0019718	Smn1	100	75.251	Mus_spretus
ENSCLAG00000000284	-	95	82.332	ENSMPUG00000014470	-	98	82.332	Mustela_putorius_furo
ENSCLAG00000000284	-	96	77.891	ENSMLUG00000010603	-	96	77.377	Myotis_lucifugus
ENSCLAG00000000284	-	100	75.168	ENSNGAG00000019833	Smn1	100	75.168	Nannospalax_galili
ENSCLAG00000000284	-	92	51.439	ENSNBRG00000023000	smn1	94	55.036	Neolamprologus_brichardi
ENSCLAG00000000284	-	99	80.000	ENSNLEG00000004454	-	99	80.000	Nomascus_leucogenys
ENSCLAG00000000284	-	77	61.135	ENSMEUG00000011393	-	99	61.135	Notamacropus_eugenii
ENSCLAG00000000284	-	86	77.519	ENSOPRG00000002015	-	100	77.132	Ochotona_princeps
ENSCLAG00000000284	-	95	90.106	ENSODEG00000015976	-	97	90.106	Octodon_degus
ENSCLAG00000000284	-	92	50.719	ENSONIG00000011799	smn1	94	54.676	Oreochromis_niloticus
ENSCLAG00000000284	-	94	63.406	ENSOANG00000001626	-	96	62.950	Ornithorhynchus_anatinus
ENSCLAG00000000284	-	99	75.421	ENSOCUG00000026649	-	99	78.114	Oryctolagus_cuniculus
ENSCLAG00000000284	-	100	78.983	ENSOCUG00000017097	-	99	78.983	Oryctolagus_cuniculus
ENSCLAG00000000284	-	99	70.432	ENSOCUG00000025183	-	99	71.096	Oryctolagus_cuniculus
ENSCLAG00000000284	-	92	51.601	ENSORLG00000010552	smn1	94	51.449	Oryzias_latipes
ENSCLAG00000000284	-	91	52.734	ENSORLG00020007936	smn1	93	50.000	Oryzias_latipes_hni
ENSCLAG00000000284	-	60	55.689	ENSORLG00015022425	smn1	94	50.000	Oryzias_latipes_hsok
ENSCLAG00000000284	-	58	60.897	ENSOMEG00000007824	smn1	94	52.347	Oryzias_melastigma
ENSCLAG00000000284	-	91	69.675	ENSOGAG00000031414	-	100	68.367	Otolemur_garnettii
ENSCLAG00000000284	-	94	78.214	ENSOARG00000005425	-	100	78.214	Ovis_aries
ENSCLAG00000000284	-	99	80.000	ENSPPAG00000036640	-	99	80.000	Pan_paniscus
ENSCLAG00000000284	-	100	80.201	ENSPPRG00000005575	-	100	80.201	Panthera_pardus
ENSCLAG00000000284	-	100	80.150	ENSPTIG00000007745	-	100	80.150	Panthera_tigris_altaica
ENSCLAG00000000284	-	99	80.000	ENSPTRG00000016955	-	99	80.000	Pan_troglodytes
ENSCLAG00000000284	-	99	81.509	ENSPANG00000013601	-	99	81.509	Papio_anubis
ENSCLAG00000000284	-	98	75.510	ENSPANG00000000253	-	98	75.850	Papio_anubis
ENSCLAG00000000284	-	91	50.800	ENSPKIG00000011096	smn1	94	50.370	Paramormyrops_kingsleyae
ENSCLAG00000000284	-	91	57.706	ENSPSIG00000014787	-	87	57.914	Pelodiscus_sinensis
ENSCLAG00000000284	-	92	47.636	ENSPMGG00000012285	smn1	94	49.618	Periophthalmus_magnuspinnatus
ENSCLAG00000000284	-	92	40.942	ENSPMAG00000005004	smn1	99	41.017	Petromyzon_marinus
ENSCLAG00000000284	-	97	67.014	ENSPCIG00000025764	-	99	67.014	Phascolarctos_cinereus
ENSCLAG00000000284	-	92	52.347	ENSPFOG00000007786	smn1	94	51.079	Poecilia_formosa
ENSCLAG00000000284	-	91	54.656	ENSPLAG00000012071	smn1	94	53.937	Poecilia_latipinna
ENSCLAG00000000284	-	91	54.251	ENSPMEG00000017085	smn1	94	53.543	Poecilia_mexicana
ENSCLAG00000000284	-	91	54.762	ENSPREG00000005824	smn1	94	51.799	Poecilia_reticulata
ENSCLAG00000000284	-	91	77.941	ENSPPYG00000015533	-	96	77.941	Pongo_abelii
ENSCLAG00000000284	-	84	54.911	ENSPPYG00000019189	-	99	53.712	Pongo_abelii
ENSCLAG00000000284	-	91	75.824	ENSPCAG00000004187	-	100	75.458	Procavia_capensis
ENSCLAG00000000284	-	88	63.830	ENSPCOG00000022307	-	100	65.957	Propithecus_coquereli
ENSCLAG00000000284	-	100	80.808	ENSPVAG00000005977	-	100	80.808	Pteropus_vampyrus
ENSCLAG00000000284	-	92	51.439	ENSPNYG00000014148	smn1	94	55.036	Pundamilia_nyererei
ENSCLAG00000000284	-	93	48.214	ENSPNAG00000014007	smn1	83	49.451	Pygocentrus_nattereri
ENSCLAG00000000284	-	100	74.916	ENSRNOG00000018067	Smn1	100	74.916	Rattus_norvegicus
ENSCLAG00000000284	-	95	67.925	ENSRBIG00000036775	-	95	68.085	Rhinopithecus_bieti
ENSCLAG00000000284	-	99	81.132	ENSRBIG00000037052	-	99	81.132	Rhinopithecus_bieti
ENSCLAG00000000284	-	99	66.547	ENSRROG00000031088	-	99	66.544	Rhinopithecus_roxellana
ENSCLAG00000000284	-	99	81.132	ENSRROG00000039399	-	99	81.132	Rhinopithecus_roxellana
ENSCLAG00000000284	-	99	83.019	ENSSBOG00000011665	-	99	83.019	Saimiri_boliviensis_boliviensis
ENSCLAG00000000284	-	83	72.656	ENSSBOG00000020112	-	87	73.047	Saimiri_boliviensis_boliviensis
ENSCLAG00000000284	-	97	67.128	ENSSHAG00000001499	-	100	64.875	Sarcophilus_harrisii
ENSCLAG00000000284	-	91	52.590	ENSSFOG00015015507	smn1	94	49.412	Scleropages_formosus
ENSCLAG00000000284	-	92	49.818	ENSSMAG00000007922	smn1	94	48.188	Scophthalmus_maximus
ENSCLAG00000000284	-	92	48.763	ENSSDUG00000018533	smn1	94	51.254	Seriola_dumerili
ENSCLAG00000000284	-	92	51.237	ENSSLDG00000021135	smn1	94	51.613	Seriola_lalandi_dorsalis
ENSCLAG00000000284	-	92	63.603	ENSSPUG00000000373	-	93	61.029	Sphenodon_punctatus
ENSCLAG00000000284	-	92	52.857	ENSSPAG00000004345	smn1	94	53.282	Stegastes_partitus
ENSCLAG00000000284	-	72	55.924	ENSSSCG00000033865	-	93	55.825	Sus_scrofa
ENSCLAG00000000284	-	100	78.859	ENSSSCG00000016970	-	100	78.859	Sus_scrofa
ENSCLAG00000000284	-	98	59.160	ENSSSCG00000029127	-	99	59.160	Sus_scrofa
ENSCLAG00000000284	-	92	57.401	ENSTGUG00000001548	-	99	54.513	Taeniopygia_guttata
ENSCLAG00000000284	-	90	46.494	ENSTRUG00000000736	smn	94	46.715	Takifugu_rubripes
ENSCLAG00000000284	-	92	47.931	ENSTNIG00000009892	smn1	94	47.143	Tetraodon_nigroviridis
ENSCLAG00000000284	-	71	77.778	ENSTBEG00000002399	-	89	77.202	Tupaia_belangeri
ENSCLAG00000000284	-	96	77.113	ENSTTRG00000005080	-	100	76.431	Tursiops_truncatus
ENSCLAG00000000284	-	71	79.894	ENSUAMG00000024947	-	68	79.275	Ursus_americanus
ENSCLAG00000000284	-	96	83.217	ENSUMAG00000007842	-	75	82.155	Ursus_maritimus
ENSCLAG00000000284	-	70	92.593	ENSVPAG00000009887	-	100	69.258	Vicugna_pacos
ENSCLAG00000000284	-	96	80.986	ENSVVUG00000006934	-	100	79.461	Vulpes_vulpes
ENSCLAG00000000284	-	94	53.929	ENSXETG00000018189	smn2	96	50.699	Xenopus_tropicalis
ENSCLAG00000000284	-	91	35.689	ENSXETG00000004912	-	60	38.235	Xenopus_tropicalis
ENSCLAG00000000284	-	91	54.365	ENSXMAG00000001521	smn1	94	51.264	Xiphophorus_maculatus