EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000001002 (Gene tree)
Gene ID: 102025292
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 6460 bases
Position: chrJH722010.1:1273284-1279743
Accession: 102025292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000001318	Exo_endo_phos	PF03372.23	5.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000001360	APEX1-201	5293	XM_005412062	ENSCLAP00000001318	318 (aa)	XP_005412119	UPI00038F157A

Gene Model

Click here to download ENSCLAG00000001002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001002	APEX1	100	94.654	ENSG00000100823	APEX1	100	94.654	Homo_sapiens
ENSCLAG00000001002	APEX1	88	69.892	ENSAPOG00000017002	apex1	94	68.858	Acanthochromis_polyacanthus
ENSCLAG00000001002	APEX1	100	96.541	ENSAMEG00000005418	APEX1	100	96.541	Ailuropoda_melanoleuca
ENSCLAG00000001002	APEX1	87	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSCLAG00000001002	APEX1	88	69.534	ENSAOCG00000009649	apex1	93	68.512	Amphiprion_ocellaris
ENSCLAG00000001002	APEX1	88	69.534	ENSAPEG00000021453	apex1	93	68.512	Amphiprion_percula
ENSCLAG00000001002	APEX1	86	70.909	ENSATEG00000002883	apex1	97	66.772	Anabas_testudineus
ENSCLAG00000001002	APEX1	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSCLAG00000001002	APEX1	100	94.654	ENSANAG00000030117	APEX1	100	94.654	Aotus_nancymaae
ENSCLAG00000001002	APEX1	87	71.739	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSCLAG00000001002	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSCLAG00000001002	APEX1	100	94.340	ENSBTAG00000002745	APEX1	100	94.340	Bos_taurus
ENSCLAG00000001002	APEX1	84	43.542	WBGene00001372	exo-3	93	43.542	Caenorhabditis_elegans
ENSCLAG00000001002	APEX1	100	95.283	ENSCJAG00000009726	APEX1	100	95.283	Callithrix_jacchus
ENSCLAG00000001002	APEX1	100	94.025	ENSCAFG00000032033	APEX1	100	94.025	Canis_familiaris
ENSCLAG00000001002	APEX1	100	94.025	ENSCAFG00020014377	-	100	94.025	Canis_lupus_dingo
ENSCLAG00000001002	APEX1	54	90.698	ENSCAFG00020023002	-	96	90.698	Canis_lupus_dingo
ENSCLAG00000001002	APEX1	98	75.321	ENSCHIG00000014537	-	99	75.321	Capra_hircus
ENSCLAG00000001002	APEX1	100	93.711	ENSCHIG00000007298	-	100	93.711	Capra_hircus
ENSCLAG00000001002	APEX1	100	94.969	ENSTSYG00000034813	APEX1	100	94.969	Carlito_syrichta
ENSCLAG00000001002	APEX1	85	88.561	ENSCAPG00000016235	APEX1	91	97.458	Cavia_aperea
ENSCLAG00000001002	APEX1	100	96.855	ENSCPOG00000030909	APEX1	100	96.855	Cavia_porcellus
ENSCLAG00000001002	APEX1	100	95.283	ENSCCAG00000033056	-	100	95.283	Cebus_capucinus
ENSCLAG00000001002	APEX1	100	82.075	ENSCCAG00000031931	-	100	82.075	Cebus_capucinus
ENSCLAG00000001002	APEX1	100	94.969	ENSCATG00000015580	APEX1	100	94.969	Cercocebus_atys
ENSCLAG00000001002	APEX1	100	94.654	ENSCSAG00000016685	-	100	94.654	Chlorocebus_sabaeus
ENSCLAG00000001002	APEX1	100	94.654	ENSCSAG00000016670	-	100	94.654	Chlorocebus_sabaeus
ENSCLAG00000001002	APEX1	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSCLAG00000001002	APEX1	95	54.221	ENSCING00000008137	-	97	54.221	Ciona_intestinalis
ENSCLAG00000001002	APEX1	90	48.667	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSCLAG00000001002	APEX1	100	95.283	ENSCANG00000030726	APEX1	100	95.283	Colobus_angolensis_palliatus
ENSCLAG00000001002	APEX1	100	91.195	ENSCGRG00001017046	Apex1	100	91.195	Cricetulus_griseus_chok1gshd
ENSCLAG00000001002	APEX1	100	91.195	ENSCGRG00000008984	Apex1	100	91.195	Cricetulus_griseus_crigri
ENSCLAG00000001002	APEX1	99	64.353	ENSCSEG00000017499	apex1	99	64.353	Cynoglossus_semilaevis
ENSCLAG00000001002	APEX1	88	70.968	ENSCVAG00000022075	apex1	99	66.139	Cyprinodon_variegatus
ENSCLAG00000001002	APEX1	100	65.409	ENSDARG00000045843	apex1	100	65.723	Danio_rerio
ENSCLAG00000001002	APEX1	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSCLAG00000001002	APEX1	100	94.969	ENSDORG00000001616	Apex1	100	94.969	Dipodomys_ordii
ENSCLAG00000001002	APEX1	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSCLAG00000001002	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSCLAG00000001002	APEX1	100	96.226	ENSEASG00005017489	APEX1	74	96.226	Equus_asinus_asinus
ENSCLAG00000001002	APEX1	100	96.226	ENSECAG00000022325	APEX1	82	96.226	Equus_caballus
ENSCLAG00000001002	APEX1	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSCLAG00000001002	APEX1	100	65.409	ENSELUG00000021706	apex1	100	65.409	Esox_lucius
ENSCLAG00000001002	APEX1	100	97.170	ENSFCAG00000030869	APEX1	100	97.170	Felis_catus
ENSCLAG00000001002	APEX1	100	97.170	ENSFDAG00000006120	APEX1	100	97.170	Fukomys_damarensis
ENSCLAG00000001002	APEX1	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSCLAG00000001002	APEX1	99	61.006	ENSGMOG00000007943	apex1	99	61.006	Gadus_morhua
ENSCLAG00000001002	APEX1	88	72.043	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSCLAG00000001002	APEX1	99	64.557	ENSGACG00000019497	apex1	99	68.421	Gasterosteus_aculeatus
ENSCLAG00000001002	APEX1	100	70.533	ENSGAGG00000014999	APEX1	100	70.533	Gopherus_agassizii
ENSCLAG00000001002	APEX1	100	94.969	ENSGGOG00000002128	APEX1	100	94.969	Gorilla_gorilla
ENSCLAG00000001002	APEX1	99	65.823	ENSHBUG00000005894	apex1	99	66.456	Haplochromis_burtoni
ENSCLAG00000001002	APEX1	100	97.799	ENSHGLG00000002848	APEX1	100	97.799	Heterocephalus_glaber_female
ENSCLAG00000001002	APEX1	100	97.799	ENSHGLG00100017878	APEX1	100	97.799	Heterocephalus_glaber_male
ENSCLAG00000001002	APEX1	99	65.094	ENSHCOG00000009961	apex1	99	65.094	Hippocampus_comes
ENSCLAG00000001002	APEX1	100	68.025	ENSIPUG00000005799	apex1	100	68.025	Ictalurus_punctatus
ENSCLAG00000001002	APEX1	100	94.969	ENSSTOG00000010096	APEX1	100	94.969	Ictidomys_tridecemlineatus
ENSCLAG00000001002	APEX1	94	85.235	ENSJJAG00000020465	-	96	85.235	Jaculus_jaculus
ENSCLAG00000001002	APEX1	100	85.535	ENSJJAG00000003660	-	100	85.535	Jaculus_jaculus
ENSCLAG00000001002	APEX1	100	94.654	ENSJJAG00000012067	-	100	94.654	Jaculus_jaculus
ENSCLAG00000001002	APEX1	88	71.326	ENSKMAG00000021171	apex1	99	66.456	Kryptolebias_marmoratus
ENSCLAG00000001002	APEX1	88	68.459	ENSLBEG00000010248	apex1	99	64.984	Labrus_bergylta
ENSCLAG00000001002	APEX1	100	67.188	ENSLACG00000008617	APEX1	100	67.188	Latimeria_chalumnae
ENSCLAG00000001002	APEX1	100	66.149	ENSLOCG00000015516	apex1	99	66.149	Lepisosteus_oculatus
ENSCLAG00000001002	APEX1	100	93.082	ENSLAFG00000021872	APEX1	100	93.082	Loxodonta_africana
ENSCLAG00000001002	APEX1	100	94.969	ENSMFAG00000002565	APEX1	100	94.969	Macaca_fascicularis
ENSCLAG00000001002	APEX1	100	94.969	ENSMMUG00000048039	APEX1	100	94.969	Macaca_mulatta
ENSCLAG00000001002	APEX1	100	94.969	ENSMNEG00000036944	APEX1	100	94.969	Macaca_nemestrina
ENSCLAG00000001002	APEX1	100	94.969	ENSMLEG00000042125	APEX1	100	94.969	Mandrillus_leucophaeus
ENSCLAG00000001002	APEX1	88	71.685	ENSMAMG00000023526	apex1	99	67.508	Mastacembelus_armatus
ENSCLAG00000001002	APEX1	87	71.739	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSCLAG00000001002	APEX1	100	92.138	ENSMAUG00000013994	Apex1	100	92.138	Mesocricetus_auratus
ENSCLAG00000001002	APEX1	100	95.597	ENSMICG00000043554	APEX1	100	95.597	Microcebus_murinus
ENSCLAG00000001002	APEX1	100	92.138	ENSMOCG00000013721	Apex1	100	92.138	Microtus_ochrogaster
ENSCLAG00000001002	APEX1	88	67.857	ENSMMOG00000010031	apex1	97	63.522	Mola_mola
ENSCLAG00000001002	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	85.093	Monodelphis_domestica
ENSCLAG00000001002	APEX1	88	64.516	ENSMALG00000011699	apex1	79	63.140	Monopterus_albus
ENSCLAG00000001002	APEX1	99	93.691	MGP_CAROLIEiJ_G0019209	Apex1	100	92.697	Mus_caroli
ENSCLAG00000001002	APEX1	100	94.340	ENSMUSG00000035960	Apex1	100	94.340	Mus_musculus
ENSCLAG00000001002	APEX1	100	93.711	MGP_PahariEiJ_G0030232	Apex1	100	93.711	Mus_pahari
ENSCLAG00000001002	APEX1	100	94.340	MGP_SPRETEiJ_G0020101	Apex1	100	94.340	Mus_spretus
ENSCLAG00000001002	APEX1	100	94.688	ENSMLUG00000028957	APEX1	100	94.688	Myotis_lucifugus
ENSCLAG00000001002	APEX1	100	71.384	ENSNGAG00000021748	-	99	71.384	Nannospalax_galili
ENSCLAG00000001002	APEX1	100	94.340	ENSNGAG00000002725	-	100	94.340	Nannospalax_galili
ENSCLAG00000001002	APEX1	87	71.377	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSCLAG00000001002	APEX1	100	94.654	ENSNLEG00000010839	APEX1	100	94.654	Nomascus_leucogenys
ENSCLAG00000001002	APEX1	100	85.849	ENSMEUG00000014519	APEX1	100	85.849	Notamacropus_eugenii
ENSCLAG00000001002	APEX1	100	93.082	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSCLAG00000001002	APEX1	97	77.994	ENSODEG00000004777	-	99	77.994	Octodon_degus
ENSCLAG00000001002	APEX1	100	75.309	ENSODEG00000006583	-	100	75.309	Octodon_degus
ENSCLAG00000001002	APEX1	100	97.799	ENSODEG00000001703	-	100	97.799	Octodon_degus
ENSCLAG00000001002	APEX1	87	71.942	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSCLAG00000001002	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSCLAG00000001002	APEX1	100	93.711	ENSOCUG00000005022	APEX1	100	93.711	Oryctolagus_cuniculus
ENSCLAG00000001002	APEX1	99	66.352	ENSORLG00000012378	apex1	99	66.667	Oryzias_latipes
ENSCLAG00000001002	APEX1	99	66.352	ENSORLG00020021371	apex1	99	66.667	Oryzias_latipes_hni
ENSCLAG00000001002	APEX1	99	66.352	ENSORLG00015020089	apex1	99	66.667	Oryzias_latipes_hsok
ENSCLAG00000001002	APEX1	99	66.352	ENSOMEG00000018876	apex1	99	67.296	Oryzias_melastigma
ENSCLAG00000001002	APEX1	98	84.295	ENSOGAG00000029355	-	100	84.295	Otolemur_garnettii
ENSCLAG00000001002	APEX1	100	94.969	ENSOGAG00000013335	-	100	94.969	Otolemur_garnettii
ENSCLAG00000001002	APEX1	99	79.430	ENSOARG00000014424	-	100	79.430	Ovis_aries
ENSCLAG00000001002	APEX1	97	89.935	ENSOARG00000001876	-	100	89.935	Ovis_aries
ENSCLAG00000001002	APEX1	100	93.082	ENSOARG00000019740	-	100	93.082	Ovis_aries
ENSCLAG00000001002	APEX1	100	94.969	ENSPPAG00000038760	APEX1	100	94.969	Pan_paniscus
ENSCLAG00000001002	APEX1	100	96.855	ENSPPRG00000011794	APEX1	100	96.855	Panthera_pardus
ENSCLAG00000001002	APEX1	100	97.170	ENSPTIG00000014829	APEX1	100	97.170	Panthera_tigris_altaica
ENSCLAG00000001002	APEX1	100	94.969	ENSPTRG00000006093	APEX1	100	94.969	Pan_troglodytes
ENSCLAG00000001002	APEX1	100	94.969	ENSPANG00000022757	APEX1	100	94.969	Papio_anubis
ENSCLAG00000001002	APEX1	87	68.231	ENSPKIG00000003504	apex1	100	63.975	Paramormyrops_kingsleyae
ENSCLAG00000001002	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSCLAG00000001002	APEX1	100	93.711	ENSPEMG00000019097	Apex1	100	93.711	Peromyscus_maniculatus_bairdii
ENSCLAG00000001002	APEX1	94	65.667	ENSPMAG00000007275	-	99	65.667	Petromyzon_marinus
ENSCLAG00000001002	APEX1	100	82.759	ENSPCIG00000023274	APEX1	100	84.735	Phascolarctos_cinereus
ENSCLAG00000001002	APEX1	88	72.401	ENSPFOG00000004178	apex1	99	67.823	Poecilia_formosa
ENSCLAG00000001002	APEX1	88	72.043	ENSPLAG00000012779	apex1	99	67.823	Poecilia_latipinna
ENSCLAG00000001002	APEX1	88	72.401	ENSPMEG00000019623	apex1	99	67.823	Poecilia_mexicana
ENSCLAG00000001002	APEX1	88	71.685	ENSPREG00000014298	apex1	99	67.192	Poecilia_reticulata
ENSCLAG00000001002	APEX1	100	94.654	ENSPPYG00000005565	APEX1	100	94.654	Pongo_abelii
ENSCLAG00000001002	APEX1	100	90.881	ENSPCAG00000010376	APEX1	100	90.881	Procavia_capensis
ENSCLAG00000001002	APEX1	100	95.597	ENSPCOG00000021564	APEX1	100	95.597	Propithecus_coquereli
ENSCLAG00000001002	APEX1	100	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSCLAG00000001002	APEX1	87	71.739	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSCLAG00000001002	APEX1	93	66.216	ENSPNAG00000020897	apex1	96	66.102	Pygocentrus_nattereri
ENSCLAG00000001002	APEX1	100	93.396	ENSRNOG00000009663	Apex1	100	93.396	Rattus_norvegicus
ENSCLAG00000001002	APEX1	100	94.969	ENSRBIG00000038325	APEX1	99	94.969	Rhinopithecus_bieti
ENSCLAG00000001002	APEX1	100	79.874	ENSSBOG00000031372	-	100	79.874	Saimiri_boliviensis_boliviensis
ENSCLAG00000001002	APEX1	100	94.969	ENSSBOG00000018921	-	100	94.969	Saimiri_boliviensis_boliviensis
ENSCLAG00000001002	APEX1	100	81.790	ENSSHAG00000013524	APEX1	100	83.129	Sarcophilus_harrisii
ENSCLAG00000001002	APEX1	100	62.264	ENSSFOG00015001948	apex1	100	61.950	Scleropages_formosus
ENSCLAG00000001002	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	65.300	Scophthalmus_maximus
ENSCLAG00000001002	APEX1	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSCLAG00000001002	APEX1	99	66.139	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSCLAG00000001002	APEX1	95	71.429	ENSSPUG00000000531	APEX1	99	71.429	Sphenodon_punctatus
ENSCLAG00000001002	APEX1	88	70.251	ENSSPAG00000000458	apex1	96	68.259	Stegastes_partitus
ENSCLAG00000001002	APEX1	100	94.654	ENSSSCG00000040060	-	100	94.654	Sus_scrofa
ENSCLAG00000001002	APEX1	98	55.346	ENSSSCG00000039705	-	99	57.947	Sus_scrofa
ENSCLAG00000001002	APEX1	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSCLAG00000001002	APEX1	87	67.986	ENSTRUG00000004268	apex1	95	63.608	Takifugu_rubripes
ENSCLAG00000001002	APEX1	99	63.608	ENSTNIG00000005778	apex1	99	63.608	Tetraodon_nigroviridis
ENSCLAG00000001002	APEX1	100	91.195	ENSTBEG00000006405	APEX1	100	91.195	Tupaia_belangeri
ENSCLAG00000001002	APEX1	74	94.492	ENSTTRG00000007860	APEX1	100	94.492	Tursiops_truncatus
ENSCLAG00000001002	APEX1	100	96.226	ENSUAMG00000010457	APEX1	100	96.226	Ursus_americanus
ENSCLAG00000001002	APEX1	100	96.226	ENSUMAG00000009178	APEX1	100	96.226	Ursus_maritimus
ENSCLAG00000001002	APEX1	74	89.407	ENSVPAG00000005083	APEX1	100	89.407	Vicugna_pacos
ENSCLAG00000001002	APEX1	100	93.396	ENSVVUG00000009010	APEX1	100	93.396	Vulpes_vulpes
ENSCLAG00000001002	APEX1	100	66.667	ENSXETG00000024773	apex1	100	66.667	Xenopus_tropicalis
ENSCLAG00000001002	APEX1	88	72.043	ENSXCOG00000015233	apex1	99	67.405	Xiphophorus_couchianus
ENSCLAG00000001002	APEX1	93	67.752	ENSXMAG00000006195	apex1	99	67.405	Xiphophorus_maculatus