EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000001029 (Gene tree)
Gene ID: 102006667
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 38275 bases
Position: chrJH721945.1:7112457-7150731
Accession: 102006667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000001351	Suf	PF05843.14	1.9e-11	1	1
ENSCLAP00000001351	S1	PF00575.23	2.2e-70	1	5
ENSCLAP00000001351	S1	PF00575.23	2.2e-70	2	5
ENSCLAP00000001351	S1	PF00575.23	2.2e-70	3	5
ENSCLAP00000001351	S1	PF00575.23	2.2e-70	4	5
ENSCLAP00000001351	S1	PF00575.23	2.2e-70	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000001393	PDCD11-201	5574	XM_005403810	ENSCLAP00000001351	1857 (aa)	XP_005403867	-

Gene Model

Click here to download ENSCLAG00000001029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001029	PDCD11	100	83.333	ENSG00000148843	PDCD11	100	83.333	Homo_sapiens
ENSCLAG00000001029	PDCD11	99	43.610	ENSAPOG00000015629	pdcd11	99	43.610	Acanthochromis_polyacanthus
ENSCLAG00000001029	PDCD11	99	81.104	ENSAMEG00000017935	PDCD11	99	81.263	Ailuropoda_melanoleuca
ENSCLAG00000001029	PDCD11	99	43.474	ENSAOCG00000015287	pdcd11	99	43.633	Amphiprion_ocellaris
ENSCLAG00000001029	PDCD11	53	42.000	ENSAPEG00000020240	pdcd11	96	42.000	Amphiprion_percula
ENSCLAG00000001029	PDCD11	99	43.666	ENSATEG00000021043	pdcd11	99	43.720	Anabas_testudineus
ENSCLAG00000001029	PDCD11	99	55.117	ENSAPLG00000010301	PDCD11	99	55.136	Anas_platyrhynchos
ENSCLAG00000001029	PDCD11	99	54.252	ENSACAG00000004796	PDCD11	99	54.252	Anolis_carolinensis
ENSCLAG00000001029	PDCD11	99	82.755	ENSANAG00000034576	PDCD11	99	82.755	Aotus_nancymaae
ENSCLAG00000001029	PDCD11	87	65.541	ENSACLG00000018236	pdcd11	99	60.172	Astatotilapia_calliptera
ENSCLAG00000001029	PDCD11	98	40.604	ENSAMXG00000005458	pdcd11	99	41.507	Astyanax_mexicanus
ENSCLAG00000001029	PDCD11	100	78.981	ENSBTAG00000009715	PDCD11	100	78.981	Bos_taurus
ENSCLAG00000001029	PDCD11	99	82.604	ENSCJAG00000018257	PDCD11	99	82.755	Callithrix_jacchus
ENSCLAG00000001029	PDCD11	99	81.596	ENSCAFG00000010411	PDCD11	100	82.002	Canis_familiaris
ENSCLAG00000001029	PDCD11	100	81.413	ENSCAFG00020010369	PDCD11	100	82.347	Canis_lupus_dingo
ENSCLAG00000001029	PDCD11	99	78.970	ENSCHIG00000025218	PDCD11	99	79.138	Capra_hircus
ENSCLAG00000001029	PDCD11	98	77.223	ENSTSYG00000033423	PDCD11	100	77.223	Carlito_syrichta
ENSCLAG00000001029	PDCD11	91	75.665	ENSCAPG00000005386	PDCD11	99	75.665	Cavia_aperea
ENSCLAG00000001029	PDCD11	100	84.624	ENSCPOG00000010957	PDCD11	99	86.044	Cavia_porcellus
ENSCLAG00000001029	PDCD11	99	82.862	ENSCCAG00000018950	PDCD11	99	82.862	Cebus_capucinus
ENSCLAG00000001029	PDCD11	100	83.723	ENSCATG00000044331	PDCD11	100	83.723	Cercocebus_atys
ENSCLAG00000001029	PDCD11	100	83.759	ENSCSAG00000005346	PDCD11	100	83.759	Chlorocebus_sabaeus
ENSCLAG00000001029	PDCD11	80	93.798	ENSCHOG00000004796	PDCD11	89	93.798	Choloepus_hoffmanni
ENSCLAG00000001029	PDCD11	91	72.414	ENSCPBG00000024487	PDCD11	99	73.639	Chrysemys_picta_bellii
ENSCLAG00000001029	PDCD11	100	83.653	ENSCANG00000043300	PDCD11	100	83.813	Colobus_angolensis_palliatus
ENSCLAG00000001029	PDCD11	100	78.824	ENSCGRG00001006458	Pdcd11	100	78.824	Cricetulus_griseus_chok1gshd
ENSCLAG00000001029	PDCD11	100	78.728	ENSCGRG00000003583	Pdcd11	100	78.728	Cricetulus_griseus_crigri
ENSCLAG00000001029	PDCD11	97	42.512	ENSCSEG00000010739	pdcd11	99	42.841	Cynoglossus_semilaevis
ENSCLAG00000001029	PDCD11	89	63.450	ENSCVAG00000018903	pdcd11	99	50.472	Cyprinodon_variegatus
ENSCLAG00000001029	PDCD11	99	42.548	ENSDARG00000052480	pdcd11	99	43.040	Danio_rerio
ENSCLAG00000001029	PDCD11	100	80.244	ENSDNOG00000013838	PDCD11	100	80.404	Dasypus_novemcinctus
ENSCLAG00000001029	PDCD11	100	80.891	ENSDORG00000010420	Pdcd11	100	81.394	Dipodomys_ordii
ENSCLAG00000001029	PDCD11	56	37.580	FBgn0039182	CG5728	72	37.580	Drosophila_melanogaster
ENSCLAG00000001029	PDCD11	95	69.707	ENSETEG00000000813	PDCD11	100	69.707	Echinops_telfairi
ENSCLAG00000001029	PDCD11	67	52.613	ENSEBUG00000002358	-	93	52.613	Eptatretus_burgeri
ENSCLAG00000001029	PDCD11	96	82.248	ENSEASG00005015159	PDCD11	100	82.415	Equus_asinus_asinus
ENSCLAG00000001029	PDCD11	100	82.606	ENSECAG00000020507	PDCD11	100	82.660	Equus_caballus
ENSCLAG00000001029	PDCD11	98	85.000	ENSEEUG00000009245	PDCD11	91	85.000	Erinaceus_europaeus
ENSCLAG00000001029	PDCD11	99	44.450	ENSELUG00000004211	pdcd11	99	44.551	Esox_lucius
ENSCLAG00000001029	PDCD11	99	82.297	ENSFCAG00000002384	PDCD11	99	82.562	Felis_catus
ENSCLAG00000001029	PDCD11	99	55.200	ENSFALG00000008775	PDCD11	99	55.787	Ficedula_albicollis
ENSCLAG00000001029	PDCD11	100	84.992	ENSFDAG00000009532	PDCD11	100	84.992	Fukomys_damarensis
ENSCLAG00000001029	PDCD11	89	67.230	ENSFHEG00000022997	pdcd11	96	67.230	Fundulus_heteroclitus
ENSCLAG00000001029	PDCD11	92	44.772	ENSGMOG00000004186	pdcd11	93	45.031	Gadus_morhua
ENSCLAG00000001029	PDCD11	76	53.819	ENSGALG00000008265	PDCD11	99	52.921	Gallus_gallus
ENSCLAG00000001029	PDCD11	93	49.550	ENSGAFG00000012806	pdcd11	99	49.550	Gambusia_affinis
ENSCLAG00000001029	PDCD11	99	43.647	ENSGACG00000018233	pdcd11	94	58.667	Gasterosteus_aculeatus
ENSCLAG00000001029	PDCD11	95	58.784	ENSGAGG00000024314	PDCD11	99	58.797	Gopherus_agassizii
ENSCLAG00000001029	PDCD11	100	83.227	ENSGGOG00000011621	PDCD11	100	83.227	Gorilla_gorilla
ENSCLAG00000001029	PDCD11	99	43.576	ENSHBUG00000020226	pdcd11	99	43.827	Haplochromis_burtoni
ENSCLAG00000001029	PDCD11	100	85.745	ENSHGLG00000001462	PDCD11	100	85.852	Heterocephalus_glaber_female
ENSCLAG00000001029	PDCD11	100	84.891	ENSHGLG00100018779	PDCD11	100	84.997	Heterocephalus_glaber_male
ENSCLAG00000001029	PDCD11	99	42.713	ENSHCOG00000016006	pdcd11	99	42.766	Hippocampus_comes
ENSCLAG00000001029	PDCD11	62	40.188	ENSIPUG00000015102	pdcd11	99	41.272	Ictalurus_punctatus
ENSCLAG00000001029	PDCD11	100	83.565	ENSSTOG00000014553	PDCD11	100	83.565	Ictidomys_tridecemlineatus
ENSCLAG00000001029	PDCD11	100	82.529	ENSJJAG00000015523	Pdcd11	100	82.690	Jaculus_jaculus
ENSCLAG00000001029	PDCD11	99	48.446	ENSLOCG00000011818	pdcd11	99	48.903	Lepisosteus_oculatus
ENSCLAG00000001029	PDCD11	100	80.922	ENSLAFG00000008398	PDCD11	100	80.922	Loxodonta_africana
ENSCLAG00000001029	PDCD11	100	83.706	ENSMFAG00000044058	PDCD11	100	83.972	Macaca_fascicularis
ENSCLAG00000001029	PDCD11	100	83.759	ENSMMUG00000007058	PDCD11	100	84.026	Macaca_mulatta
ENSCLAG00000001029	PDCD11	100	83.653	ENSMNEG00000040726	PDCD11	99	83.919	Macaca_nemestrina
ENSCLAG00000001029	PDCD11	100	83.172	ENSMLEG00000040978	PDCD11	100	82.995	Mandrillus_leucophaeus
ENSCLAG00000001029	PDCD11	99	43.170	ENSMAMG00000009572	pdcd11	99	43.518	Mastacembelus_armatus
ENSCLAG00000001029	PDCD11	99	43.469	ENSMZEG00005008949	pdcd11	99	43.720	Maylandia_zebra
ENSCLAG00000001029	PDCD11	94	80.369	ENSMAUG00000014924	Pdcd11	96	80.369	Mesocricetus_auratus
ENSCLAG00000001029	PDCD11	99	83.333	ENSMICG00000012421	PDCD11	99	83.333	Microcebus_murinus
ENSCLAG00000001029	PDCD11	100	78.499	ENSMOCG00000021792	Pdcd11	100	78.499	Microtus_ochrogaster
ENSCLAG00000001029	PDCD11	99	39.193	ENSMMOG00000007572	pdcd11	99	39.352	Mola_mola
ENSCLAG00000001029	PDCD11	99	61.596	ENSMODG00000011077	PDCD11	99	62.100	Monodelphis_domestica
ENSCLAG00000001029	PDCD11	88	56.812	ENSMALG00000003859	pdcd11	97	47.447	Monopterus_albus
ENSCLAG00000001029	PDCD11	100	77.380	MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.576	Mus_caroli
ENSCLAG00000001029	PDCD11	100	77.428	ENSMUSG00000025047	Pdcd11	100	77.896	Mus_musculus
ENSCLAG00000001029	PDCD11	100	77.583	MGP_PahariEiJ_G0014540	Pdcd11	100	78.009	Mus_pahari
ENSCLAG00000001029	PDCD11	100	77.457	MGP_SPRETEiJ_G0023971	Pdcd11	100	77.926	Mus_spretus
ENSCLAG00000001029	PDCD11	99	81.741	ENSMPUG00000016829	PDCD11	100	81.949	Mustela_putorius_furo
ENSCLAG00000001029	PDCD11	100	81.263	ENSMLUG00000004997	PDCD11	100	81.423	Myotis_lucifugus
ENSCLAG00000001029	PDCD11	100	81.456	ENSNGAG00000018143	Pdcd11	100	81.403	Nannospalax_galili
ENSCLAG00000001029	PDCD11	86	56.325	ENSNBRG00000021596	pdcd11	99	55.523	Neolamprologus_brichardi
ENSCLAG00000001029	PDCD11	100	80.139	ENSNLEG00000026700	PDCD11	100	80.298	Nomascus_leucogenys
ENSCLAG00000001029	PDCD11	70	78.603	ENSMEUG00000013719	-	71	78.603	Notamacropus_eugenii
ENSCLAG00000001029	PDCD11	100	76.903	ENSOPRG00000010593	PDCD11	100	76.944	Ochotona_princeps
ENSCLAG00000001029	PDCD11	99	86.919	ENSODEG00000008079	PDCD11	99	86.919	Octodon_degus
ENSCLAG00000001029	PDCD11	99	43.897	ENSONIG00000018835	pdcd11	99	44.004	Oreochromis_niloticus
ENSCLAG00000001029	PDCD11	99	58.849	ENSOANG00000001636	-	99	58.849	Ornithorhynchus_anatinus
ENSCLAG00000001029	PDCD11	100	82.519	ENSOCUG00000006312	PDCD11	100	82.519	Oryctolagus_cuniculus
ENSCLAG00000001029	PDCD11	99	42.941	ENSORLG00020003642	pdcd11	99	42.918	Oryzias_latipes_hni
ENSCLAG00000001029	PDCD11	99	42.895	ENSORLG00015001618	pdcd11	99	42.926	Oryzias_latipes_hsok
ENSCLAG00000001029	PDCD11	78	44.156	ENSOMEG00000010904	pdcd11	98	44.156	Oryzias_melastigma
ENSCLAG00000001029	PDCD11	99	81.930	ENSOGAG00000008683	PDCD11	99	81.930	Otolemur_garnettii
ENSCLAG00000001029	PDCD11	99	78.780	ENSOARG00000003719	PDCD11	99	78.833	Ovis_aries
ENSCLAG00000001029	PDCD11	100	82.098	ENSPPAG00000024593	PDCD11	100	82.098	Pan_paniscus
ENSCLAG00000001029	PDCD11	99	82.711	ENSPPRG00000015133	PDCD11	99	82.871	Panthera_pardus
ENSCLAG00000001029	PDCD11	99	82.623	ENSPTIG00000011433	PDCD11	99	82.783	Panthera_tigris_altaica
ENSCLAG00000001029	PDCD11	100	83.360	ENSPTRG00000002911	PDCD11	100	83.360	Pan_troglodytes
ENSCLAG00000001029	PDCD11	100	83.706	ENSPANG00000020959	PDCD11	100	83.706	Papio_anubis
ENSCLAG00000001029	PDCD11	99	45.239	ENSPKIG00000000973	pdcd11	99	45.679	Paramormyrops_kingsleyae
ENSCLAG00000001029	PDCD11	77	57.719	ENSPSIG00000005102	PDCD11	95	57.719	Pelodiscus_sinensis
ENSCLAG00000001029	PDCD11	61	62.058	ENSPMGG00000007289	pdcd11	84	62.058	Periophthalmus_magnuspinnatus
ENSCLAG00000001029	PDCD11	100	78.849	ENSPEMG00000010315	Pdcd11	100	79.104	Peromyscus_maniculatus_bairdii
ENSCLAG00000001029	PDCD11	99	42.525	ENSPMAG00000003098	pdcd11	99	42.328	Petromyzon_marinus
ENSCLAG00000001029	PDCD11	99	65.252	ENSPCIG00000001118	PDCD11	99	65.340	Phascolarctos_cinereus
ENSCLAG00000001029	PDCD11	99	44.051	ENSPFOG00000006012	pdcd11	99	44.212	Poecilia_formosa
ENSCLAG00000001029	PDCD11	96	48.876	ENSPLAG00000014494	pdcd11	99	49.626	Poecilia_latipinna
ENSCLAG00000001029	PDCD11	90	53.527	ENSPMEG00000018177	pdcd11	98	54.873	Poecilia_mexicana
ENSCLAG00000001029	PDCD11	99	44.064	ENSPREG00000000475	pdcd11	99	44.118	Poecilia_reticulata
ENSCLAG00000001029	PDCD11	100	81.317	ENSPPYG00000002621	PDCD11	100	81.317	Pongo_abelii
ENSCLAG00000001029	PDCD11	73	74.572	ENSPCAG00000011663	PDCD11	75	74.572	Procavia_capensis
ENSCLAG00000001029	PDCD11	99	77.469	ENSPCOG00000023327	PDCD11	99	77.469	Propithecus_coquereli
ENSCLAG00000001029	PDCD11	100	80.436	ENSPVAG00000004176	PDCD11	100	80.489	Pteropus_vampyrus
ENSCLAG00000001029	PDCD11	99	43.469	ENSPNYG00000003979	pdcd11	99	43.720	Pundamilia_nyererei
ENSCLAG00000001029	PDCD11	95	45.132	ENSPNAG00000017225	pdcd11	99	45.404	Pygocentrus_nattereri
ENSCLAG00000001029	PDCD11	100	76.935	ENSRNOG00000020304	Pdcd11	99	77.323	Rattus_norvegicus
ENSCLAG00000001029	PDCD11	100	83.440	ENSRBIG00000011889	PDCD11	100	83.600	Rhinopithecus_bieti
ENSCLAG00000001029	PDCD11	100	83.440	ENSRROG00000030483	PDCD11	100	83.600	Rhinopithecus_roxellana
ENSCLAG00000001029	PDCD11	86	47.619	YMR229C	-	94	42.857	Saccharomyces_cerevisiae
ENSCLAG00000001029	PDCD11	99	83.491	ENSSBOG00000030308	PDCD11	99	83.491	Saimiri_boliviensis_boliviensis
ENSCLAG00000001029	PDCD11	99	64.659	ENSSHAG00000018258	PDCD11	99	65.069	Sarcophilus_harrisii
ENSCLAG00000001029	PDCD11	99	45.927	ENSSFOG00015003881	pdcd11	99	45.820	Scleropages_formosus
ENSCLAG00000001029	PDCD11	99	43.893	ENSSMAG00000006612	pdcd11	99	44.279	Scophthalmus_maximus
ENSCLAG00000001029	PDCD11	95	48.233	ENSSDUG00000021302	pdcd11	99	48.851	Seriola_dumerili
ENSCLAG00000001029	PDCD11	80	85.714	ENSSARG00000002540	PDCD11	74	85.714	Sorex_araneus
ENSCLAG00000001029	PDCD11	97	42.496	ENSSPAG00000017558	pdcd11	100	42.779	Stegastes_partitus
ENSCLAG00000001029	PDCD11	99	80.096	ENSSSCG00000010599	PDCD11	99	80.178	Sus_scrofa
ENSCLAG00000001029	PDCD11	75	40.580	ENSTRUG00000014291	pdcd11	99	40.458	Takifugu_rubripes
ENSCLAG00000001029	PDCD11	99	42.667	ENSTNIG00000012085	pdcd11	99	42.531	Tetraodon_nigroviridis
ENSCLAG00000001029	PDCD11	100	77.152	ENSTBEG00000001893	PDCD11	100	77.547	Tupaia_belangeri
ENSCLAG00000001029	PDCD11	99	75.968	ENSTTRG00000003356	PDCD11	99	76.286	Tursiops_truncatus
ENSCLAG00000001029	PDCD11	99	81.306	ENSUAMG00000018015	PDCD11	100	81.369	Ursus_americanus
ENSCLAG00000001029	PDCD11	100	79.396	ENSUMAG00000023567	PDCD11	100	79.449	Ursus_maritimus
ENSCLAG00000001029	PDCD11	75	86.567	ENSVPAG00000007405	PDCD11	83	86.567	Vicugna_pacos
ENSCLAG00000001029	PDCD11	99	81.523	ENSVVUG00000004457	PDCD11	100	81.949	Vulpes_vulpes
ENSCLAG00000001029	PDCD11	99	48.616	ENSXETG00000009482	pdcd11	99	49.206	Xenopus_tropicalis
ENSCLAG00000001029	PDCD11	99	38.507	ENSXCOG00000012420	pdcd11	99	38.720	Xiphophorus_couchianus
ENSCLAG00000001029	PDCD11	99	44.105	ENSXMAG00000004638	pdcd11	99	44.159	Xiphophorus_maculatus