EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001032 (Gene tree)
Gene ID: 102004435
Gene Symbol: ZC3H4
Alias: -
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 37788 bases
Position: chrJH722034.1:1029438-1067225
Accession: 102004435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000001357	zf-CCCH	PF00642.24	2.2e-13	1	1
ENSCLAP00000001356	zf-CCCH	PF00642.24	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000001399	ZC3H4-202	3300	-	ENSCLAP00000001357	1099 (aa)	-	-
ENSCLAT00000001398	ZC3H4-201	3528	XM_013509569	ENSCLAP00000001356	1175 (aa)	XP_013365023	-

Gene Model

Click here to download ENSCLAG00000001032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001032	ZC3H4	82	34.633	ENSCLAG00000006605	ZC3H6	72	43.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001032	ZC3H4	84	95.388	ENSG00000130749	ZC3H4	91	97.647	Homo_sapiens
ENSCLAG00000001032	ZC3H4	97	71.960	ENSACAG00000003986	ZC3H4	70	83.696	Anolis_carolinensis
ENSCLAG00000001032	ZC3H4	84	88.889	ENSANAG00000023963	ZC3H4	95	80.472	Aotus_nancymaae
ENSCLAG00000001032	ZC3H4	70	83.333	ENSAMXG00000009037	zc3h4	69	58.824	Astyanax_mexicanus
ENSCLAG00000001032	ZC3H4	83	94.660	ENSBTAG00000009286	ZC3H4	89	93.932	Bos_taurus
ENSCLAG00000001032	ZC3H4	98	95.631	ENSCJAG00000011601	ZC3H4	88	95.388	Callithrix_jacchus
ENSCLAG00000001032	ZC3H4	98	87.179	ENSCAFG00000004182	ZC3H4	90	94.512	Canis_familiaris
ENSCLAG00000001032	ZC3H4	98	96.894	ENSCHIG00000013956	ZC3H4	96	85.997	Capra_hircus
ENSCLAG00000001032	ZC3H4	98	86.957	ENSTSYG00000000926	ZC3H4	98	85.763	Carlito_syrichta
ENSCLAG00000001032	ZC3H4	84	87.893	ENSCCAG00000037597	ZC3H4	84	95.652	Cebus_capucinus
ENSCLAG00000001032	ZC3H4	84	92.961	ENSCATG00000039046	ZC3H4	89	92.961	Cercocebus_atys
ENSCLAG00000001032	ZC3H4	84	95.631	ENSCSAG00000002989	ZC3H4	92	95.631	Chlorocebus_sabaeus
ENSCLAG00000001032	ZC3H4	87	76.254	ENSCPBG00000001719	ZC3H4	93	82.943	Chrysemys_picta_bellii
ENSCLAG00000001032	ZC3H4	81	91.707	ENSCGRG00001016116	Zc3h4	87	91.304	Cricetulus_griseus_chok1gshd
ENSCLAG00000001032	ZC3H4	98	96.795	ENSDNOG00000003764	ZC3H4	82	97.419	Dasypus_novemcinctus
ENSCLAG00000001032	ZC3H4	100	88.863	ENSDORG00000002726	Zc3h4	94	90.719	Dipodomys_ordii
ENSCLAG00000001032	ZC3H4	86	98.864	ENSETEG00000005763	ZC3H4	72	98.851	Echinops_telfairi
ENSCLAG00000001032	ZC3H4	100	89.018	ENSECAG00000024342	ZC3H4	88	96.273	Equus_caballus
ENSCLAG00000001032	ZC3H4	78	87.742	ENSEEUG00000000519	ZC3H4	70	89.655	Erinaceus_europaeus
ENSCLAG00000001032	ZC3H4	86	95.444	ENSFCAG00000004835	ZC3H4	89	88.859	Felis_catus
ENSCLAG00000001032	ZC3H4	83	71.463	ENSGAGG00000019319	ZC3H4	92	71.734	Gopherus_agassizii
ENSCLAG00000001032	ZC3H4	84	95.388	ENSGGOG00000013071	ZC3H4	89	95.388	Gorilla_gorilla
ENSCLAG00000001032	ZC3H4	100	92.917	ENSSTOG00000016249	ZC3H4	100	93.170	Ictidomys_tridecemlineatus
ENSCLAG00000001032	ZC3H4	100	86.859	ENSJJAG00000019068	Zc3h4	91	86.471	Jaculus_jaculus
ENSCLAG00000001032	ZC3H4	83	95.631	ENSLAFG00000001586	ZC3H4	89	95.631	Loxodonta_africana
ENSCLAG00000001032	ZC3H4	84	95.388	ENSMFAG00000041518	ZC3H4	89	95.388	Macaca_fascicularis
ENSCLAG00000001032	ZC3H4	98	95.631	ENSMLEG00000007946	ZC3H4	92	95.631	Mandrillus_leucophaeus
ENSCLAG00000001032	ZC3H4	100	87.471	ENSMAUG00000000068	Zc3h4	94	85.132	Mesocricetus_auratus
ENSCLAG00000001032	ZC3H4	98	95.388	ENSMICG00000008786	ZC3H4	89	95.388	Microcebus_murinus
ENSCLAG00000001032	ZC3H4	89	78.986	ENSMODG00000008978	ZC3H4	85	78.502	Monodelphis_domestica
ENSCLAG00000001032	ZC3H4	100	86.311	ENSMUSG00000059273	Zc3h4	94	86.842	Mus_musculus
ENSCLAG00000001032	ZC3H4	100	86.775	MGP_PahariEiJ_G0021089	Zc3h4	94	86.376	Mus_pahari
ENSCLAG00000001032	ZC3H4	100	85.847	MGP_SPRETEiJ_G0030312	Zc3h4	94	85.340	Mus_spretus
ENSCLAG00000001032	ZC3H4	98	88.280	ENSMPUG00000005065	ZC3H4	95	88.449	Mustela_putorius_furo
ENSCLAG00000001032	ZC3H4	100	85.639	ENSNGAG00000020090	Zc3h4	94	87.649	Nannospalax_galili
ENSCLAG00000001032	ZC3H4	76	92.547	ENSMEUG00000009167	ZC3H4	74	86.667	Notamacropus_eugenii
ENSCLAG00000001032	ZC3H4	79	93.447	ENSOPRG00000014889	ZC3H4	79	93.548	Ochotona_princeps
ENSCLAG00000001032	ZC3H4	100	95.900	ENSODEG00000008320	ZC3H4	94	95.168	Octodon_degus
ENSCLAG00000001032	ZC3H4	92	55.882	ENSOANG00000001794	ZC3H4	59	61.679	Ornithorhynchus_anatinus
ENSCLAG00000001032	ZC3H4	81	93.939	ENSOCUG00000026069	ZC3H4	75	93.293	Oryctolagus_cuniculus
ENSCLAG00000001032	ZC3H4	84	95.146	ENSOGAG00000031123	ZC3H4	89	95.146	Otolemur_garnettii
ENSCLAG00000001032	ZC3H4	58	93.939	ENSOARG00000010932	ZC3H4	90	93.939	Ovis_aries
ENSCLAG00000001032	ZC3H4	83	95.388	ENSPPRG00000023272	ZC3H4	95	85.997	Panthera_pardus
ENSCLAG00000001032	ZC3H4	84	95.388	ENSPTRG00000011201	ZC3H4	89	95.388	Pan_troglodytes
ENSCLAG00000001032	ZC3H4	84	95.631	ENSPANG00000021115	ZC3H4	89	95.631	Papio_anubis
ENSCLAG00000001032	ZC3H4	98	73.058	ENSPSIG00000002241	ZC3H4	92	72.289	Pelodiscus_sinensis
ENSCLAG00000001032	ZC3H4	100	85.696	ENSPEMG00000009762	Zc3h4	94	85.921	Peromyscus_maniculatus_bairdii
ENSCLAG00000001032	ZC3H4	68	94.133	ENSPCAG00000014919	ZC3H4	81	94.133	Procavia_capensis
ENSCLAG00000001032	ZC3H4	84	96.117	ENSPCOG00000017169	ZC3H4	89	96.117	Propithecus_coquereli
ENSCLAG00000001032	ZC3H4	78	85.269	ENSPVAG00000005687	ZC3H4	77	95.031	Pteropus_vampyrus
ENSCLAG00000001032	ZC3H4	98	85.680	ENSRNOG00000015229	Zc3h4	91	84.547	Rattus_norvegicus
ENSCLAG00000001032	ZC3H4	98	90.700	ENSRBIG00000027984	ZC3H4	95	90.785	Rhinopithecus_bieti
ENSCLAG00000001032	ZC3H4	84	95.631	ENSRROG00000032920	ZC3H4	95	81.878	Rhinopithecus_roxellana
ENSCLAG00000001032	ZC3H4	98	89.551	ENSSBOG00000030914	ZC3H4	99	90.933	Saimiri_boliviensis_boliviensis
ENSCLAG00000001032	ZC3H4	87	88.372	ENSSARG00000014146	ZC3H4	74	91.176	Sorex_araneus
ENSCLAG00000001032	ZC3H4	100	96.128	ENSVVUG00000000208	ZC3H4	90	88.218	Vulpes_vulpes