EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001242 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 3887 bases
Position: chrJH721951.1:5126175-5130061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000001661	MMR_HSR1	PF01926.23	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000001704	-	864	-	ENSCLAP00000001661	288 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000001242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001242	-	67	41.969	ENSCLAG00000001217	GIMAP7	66	41.969
ENSCLAG00000001242	-	66	48.677	ENSCLAG00000001322	-	59	48.677
ENSCLAG00000001242	-	67	48.187	ENSCLAG00000001246	-	62	48.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001242	-	76	69.955	ENSG00000133561	GIMAP6	70	74.146	Homo_sapiens
ENSCLAG00000001242	-	98	55.363	ENSAMEG00000009802	-	82	55.363	Ailuropoda_melanoleuca
ENSCLAG00000001242	-	71	72.195	ENSANAG00000036674	GIMAP6	68	72.195	Aotus_nancymaae
ENSCLAG00000001242	-	87	53.307	ENSBTAG00000050052	-	76	53.307	Bos_taurus
ENSCLAG00000001242	-	73	70.616	ENSCJAG00000020121	GIMAP6	58	70.616	Callithrix_jacchus
ENSCLAG00000001242	-	86	54.545	ENSCAFG00000024858	-	82	54.545	Canis_familiaris
ENSCLAG00000001242	-	98	54.355	ENSCAFG00020006496	-	79	54.355	Canis_lupus_dingo
ENSCLAG00000001242	-	97	52.448	ENSCHIG00000012346	-	82	53.357	Capra_hircus
ENSCLAG00000001242	-	90	56.604	ENSCHIG00000019058	-	81	56.604	Capra_hircus
ENSCLAG00000001242	-	71	61.275	ENSCHIG00000026449	-	71	61.275	Capra_hircus
ENSCLAG00000001242	-	71	76.961	ENSTSYG00000031555	GIMAP6	69	76.961	Carlito_syrichta
ENSCLAG00000001242	-	97	67.730	ENSCPOG00000040378	-	92	67.730	Cavia_porcellus
ENSCLAG00000001242	-	71	74.146	ENSCCAG00000034011	GIMAP6	70	74.146	Cebus_capucinus
ENSCLAG00000001242	-	87	63.035	ENSCATG00000038067	GIMAP6	79	63.424	Cercocebus_atys
ENSCLAG00000001242	-	71	74.146	ENSCSAG00000006876	GIMAP6	58	74.634	Chlorocebus_sabaeus
ENSCLAG00000001242	-	76	70.455	ENSCANG00000029314	GIMAP6	60	70.909	Colobus_angolensis_palliatus
ENSCLAG00000001242	-	97	55.556	ENSCGRG00001023782	Gimap6	92	55.556	Cricetulus_griseus_chok1gshd
ENSCLAG00000001242	-	97	55.556	ENSCGRG00000014388	Gimap6	92	55.556	Cricetulus_griseus_crigri
ENSCLAG00000001242	-	55	53.333	ENSDORG00000023560	-	98	53.333	Dipodomys_ordii
ENSCLAG00000001242	-	71	75.610	ENSEASG00005007023	GIMAP6	77	75.610	Equus_asinus_asinus
ENSCLAG00000001242	-	98	62.500	ENSECAG00000003981	GIMAP6	82	62.500	Equus_caballus
ENSCLAG00000001242	-	74	65.094	ENSFCAG00000041878	GIMAP6	65	68.394	Felis_catus
ENSCLAG00000001242	-	79	81.057	ENSFDAG00000013097	-	82	81.057	Fukomys_damarensis
ENSCLAG00000001242	-	71	74.634	ENSGGOG00000000613	-	70	74.634	Gorilla_gorilla
ENSCLAG00000001242	-	98	79.298	ENSHGLG00000012994	GIMAP6	83	79.298	Heterocephalus_glaber_female
ENSCLAG00000001242	-	98	79.298	ENSHGLG00100004910	GIMAP6	83	79.298	Heterocephalus_glaber_male
ENSCLAG00000001242	-	76	71.364	ENSMFAG00000043478	GIMAP6	70	75.122	Macaca_fascicularis
ENSCLAG00000001242	-	71	74.634	ENSMMUG00000047276	GIMAP6	70	75.122	Macaca_mulatta
ENSCLAG00000001242	-	87	63.672	ENSMNEG00000029719	GIMAP6	70	74.634	Macaca_nemestrina
ENSCLAG00000001242	-	76	70.455	ENSMLEG00000029734	GIMAP6	60	70.909	Mandrillus_leucophaeus
ENSCLAG00000001242	-	91	57.037	ENSMAUG00000011214	Gimap6	87	57.037	Mesocricetus_auratus
ENSCLAG00000001242	-	65	67.196	ENSMICG00000033278	-	68	66.505	Microcebus_murinus
ENSCLAG00000001242	-	97	55.160	ENSMOCG00000018308	Gimap6	92	55.160	Microtus_ochrogaster
ENSCLAG00000001242	-	68	54.082	ENSMODG00000029183	-	55	54.082	Monodelphis_domestica
ENSCLAG00000001242	-	71	64.216	MGP_CAROLIEiJ_G0028350	Gimap6	94	52.218	Mus_caroli
ENSCLAG00000001242	-	71	65.196	ENSMUSG00000047867	Gimap6	94	52.901	Mus_musculus
ENSCLAG00000001242	-	99	52.901	MGP_SPRETEiJ_G0029353	Gimap6	94	52.901	Mus_spretus
ENSCLAG00000001242	-	70	72.414	ENSMLUG00000010888	GIMAP6	70	72.414	Myotis_lucifugus
ENSCLAG00000001242	-	97	57.239	ENSNGAG00000009129	Gimap6	93	57.239	Nannospalax_galili
ENSCLAG00000001242	-	73	58.571	ENSMEUG00000003871	-	84	58.571	Notamacropus_eugenii
ENSCLAG00000001242	-	71	74.020	ENSOCUG00000023856	-	67	74.020	Oryctolagus_cuniculus
ENSCLAG00000001242	-	71	74.020	ENSOCUG00000026993	-	67	74.020	Oryctolagus_cuniculus
ENSCLAG00000001242	-	70	62.687	ENSOGAG00000029466	-	68	62.687	Otolemur_garnettii
ENSCLAG00000001242	-	99	51.020	ENSOARG00000001356	-	83	51.890	Ovis_aries
ENSCLAG00000001242	-	71	74.146	ENSPPAG00000033178	GIMAP6	70	74.146	Pan_paniscus
ENSCLAG00000001242	-	87	64.259	ENSPTRG00000019860	GIMAP6	72	64.259	Pan_troglodytes
ENSCLAG00000001242	-	77	69.369	ENSPTRG00000045753	-	78	69.369	Pan_troglodytes
ENSCLAG00000001242	-	87	64.062	ENSPANG00000032121	GIMAP6	70	75.122	Papio_anubis
ENSCLAG00000001242	-	97	55.556	ENSPEMG00000011262	Gimap6	92	55.556	Peromyscus_maniculatus_bairdii
ENSCLAG00000001242	-	67	43.523	ENSPCIG00000016010	-	59	43.523	Phascolarctos_cinereus
ENSCLAG00000001242	-	71	74.634	ENSPPYG00000029783	-	70	74.634	Pongo_abelii
ENSCLAG00000001242	-	70	66.995	ENSPCOG00000027875	-	86	66.995	Propithecus_coquereli
ENSCLAG00000001242	-	70	67.488	ENSRNOG00000033338	Gimap6	66	67.488	Rattus_norvegicus
ENSCLAG00000001242	-	87	63.035	ENSRBIG00000031547	GIMAP6	70	73.659	Rhinopithecus_bieti
ENSCLAG00000001242	-	76	69.545	ENSRROG00000045462	GIMAP6	70	73.659	Rhinopithecus_roxellana
ENSCLAG00000001242	-	71	71.707	ENSSBOG00000022715	GIMAP6	70	71.707	Saimiri_boliviensis_boliviensis
ENSCLAG00000001242	-	68	57.143	ENSSHAG00000000570	-	74	57.143	Sarcophilus_harrisii
ENSCLAG00000001242	-	76	59.174	ENSSARG00000000290	-	74	59.174	Sorex_araneus
ENSCLAG00000001242	-	70	58.621	ENSSARG00000011388	-	78	58.621	Sorex_araneus
ENSCLAG00000001242	-	89	58.779	ENSSSCG00000027196	-	84	69.118	Sus_scrofa
ENSCLAG00000001242	-	70	69.652	ENSTTRG00000017002	-	72	61.600	Tursiops_truncatus
ENSCLAG00000001242	-	72	65.865	ENSUAMG00000000534	-	73	65.865	Ursus_americanus
ENSCLAG00000001242	-	98	55.872	ENSUAMG00000003158	-	94	55.872	Ursus_americanus
ENSCLAG00000001242	-	98	55.872	ENSUAMG00000005395	-	94	55.872	Ursus_americanus
ENSCLAG00000001242	-	72	65.385	ENSUAMG00000002021	-	73	65.385	Ursus_americanus
ENSCLAG00000001242	-	72	65.385	ENSUAMG00000004052	-	73	65.385	Ursus_americanus
ENSCLAG00000001242	-	59	68.235	ENSUMAG00000000464	-	83	68.235	Ursus_maritimus
ENSCLAG00000001242	-	90	53.409	ENSVVUG00000009155	-	66	53.409	Vulpes_vulpes