EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001377 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 6499 bases
Position: chrJH722041.1:2318-8816
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	1	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	2	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	3	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	4	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	5	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	6	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	7	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	8	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	9	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	10	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	11	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	12	13
ENSCLAP00000001862	zf-C2H2	PF00096.26	1.5e-61	13	13
ENSCLAP00000001862	zf-met	PF12874.7	2.1e-06	1	2
ENSCLAP00000001862	zf-met	PF12874.7	2.1e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000001905	-	4574	-	ENSCLAP00000001862	653 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000001377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001377	-	98	47.213	ENSCLAG00000004223	ZFP1	99	47.213
ENSCLAG00000001377	-	87	48.046	ENSCLAG00000003065	ZNF226	80	48.046
ENSCLAG00000001377	-	71	36.364	ENSCLAG00000008329	ZFP64	65	34.356
ENSCLAG00000001377	-	86	48.346	ENSCLAG00000014648	-	77	48.346
ENSCLAG00000001377	-	68	48.148	ENSCLAG00000001598	ZNF784	62	48.148
ENSCLAG00000001377	-	60	41.538	ENSCLAG00000014824	-	80	41.538
ENSCLAG00000001377	-	86	51.121	ENSCLAG00000000250	ZNF550	71	51.121
ENSCLAG00000001377	-	93	51.815	ENSCLAG00000000758	-	62	51.815
ENSCLAG00000001377	-	96	44.294	ENSCLAG00000012556	-	90	46.652
ENSCLAG00000001377	-	71	40.870	ENSCLAG00000015550	ZNF384	52	42.197
ENSCLAG00000001377	-	77	39.568	ENSCLAG00000011797	SNAI2	73	39.568
ENSCLAG00000001377	-	86	44.044	ENSCLAG00000001537	ZNF81	75	43.215
ENSCLAG00000001377	-	96	47.786	ENSCLAG00000003483	ZNF112	81	46.853
ENSCLAG00000001377	-	75	35.632	ENSCLAG00000011313	ZNF646	60	35.632
ENSCLAG00000001377	-	70	33.220	ENSCLAG00000002951	ZNF526	80	32.095
ENSCLAG00000001377	-	73	34.217	ENSCLAG00000006252	ZNF574	94	34.577
ENSCLAG00000001377	-	72	38.667	ENSCLAG00000007793	ZNF236	61	38.667
ENSCLAG00000001377	-	71	40.741	ENSCLAG00000010565	ZNF521	97	40.741
ENSCLAG00000001377	-	93	49.438	ENSCLAG00000010195	-	89	50.645
ENSCLAG00000001377	-	74	37.828	ENSCLAG00000003912	GTF3A	80	37.828
ENSCLAG00000001377	-	75	45.249	ENSCLAG00000015808	MYNN	74	45.249
ENSCLAG00000001377	-	66	43.750	ENSCLAG00000007342	ZNF423	70	43.750
ENSCLAG00000001377	-	86	49.822	ENSCLAG00000011533	ZNF768	66	49.310
ENSCLAG00000001377	-	86	37.330	ENSCLAG00000006953	ZNF319	90	37.228
ENSCLAG00000001377	-	74	42.045	ENSCLAG00000005915	GFI1	55	42.045
ENSCLAG00000001377	-	88	35.593	ENSCLAG00000001937	PRDM14	61	35.593
ENSCLAG00000001377	-	86	55.242	ENSCLAG00000003116	ZNF2	68	55.242
ENSCLAG00000001377	-	72	46.099	ENSCLAG00000005392	PRDM5	84	46.099
ENSCLAG00000001377	-	66	44.340	ENSCLAG00000001374	WT1	50	43.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001377	-	99	55.882	ENSCGRG00001010752	2610008E11Rik	80	55.882	Cricetulus_griseus_chok1gshd
ENSCLAG00000001377	-	99	55.882	ENSCGRG00000008922	2610008E11Rik	81	55.882	Cricetulus_griseus_crigri
ENSCLAG00000001377	-	100	81.057	ENSFDAG00000005609	-	83	70.353	Fukomys_damarensis
ENSCLAG00000001377	-	99	71.576	ENSFDAG00000020138	-	92	69.072	Fukomys_damarensis
ENSCLAG00000001377	-	100	83.767	ENSHGLG00000001150	-	95	83.767	Heterocephalus_glaber_female
ENSCLAG00000001377	-	99	74.408	ENSHGLG00100005328	-	95	67.127	Heterocephalus_glaber_male
ENSCLAG00000001377	-	100	83.767	ENSHGLG00100009889	-	91	83.767	Heterocephalus_glaber_male
ENSCLAG00000001377	-	99	55.066	ENSMAUG00000007597	2610008E11Rik	74	55.446	Mesocricetus_auratus
ENSCLAG00000001377	-	96	56.959	ENSNGAG00000014809	2610008E11Rik	92	57.855	Nannospalax_galili
ENSCLAG00000001377	-	99	53.920	ENSOCUG00000027634	-	91	53.920	Oryctolagus_cuniculus
ENSCLAG00000001377	-	93	58.651	ENSRNOG00000014331	Zfp810	85	58.651	Rattus_norvegicus