EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000001517 (Gene tree)
Gene ID: 102019327
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 62707 bases
Position: chrJH721900.1:16979042-17041748
Accession: 102019327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002091	Rif1_N	PF12231.8	3.3e-59	1	1
ENSCLAP00000002090	Rif1_N	PF12231.8	3.3e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002136	RIF1-202	7037	-	ENSCLAP00000002091	2342 (aa)	-	-
ENSCLAT00000002135	RIF1-201	7115	XM_013517488	ENSCLAP00000002090	2368 (aa)	XP_013372942	-

Gene Model

Click here to download ENSCLAG00000001517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001517	RIF1	99	74.414	ENSG00000080345	RIF1	89	88.360	Homo_sapiens
ENSCLAG00000001517	RIF1	62	49.570	ENSAPOG00000011073	rif1	59	49.313	Acanthochromis_polyacanthus
ENSCLAG00000001517	RIF1	99	73.777	ENSAMEG00000008461	RIF1	96	73.651	Ailuropoda_melanoleuca
ENSCLAG00000001517	RIF1	63	49.876	ENSACIG00000017765	rif1	66	49.876	Amphilophus_citrinellus
ENSCLAG00000001517	RIF1	62	49.521	ENSAOCG00000017231	rif1	60	49.262	Amphiprion_ocellaris
ENSCLAG00000001517	RIF1	68	55.267	ENSAPEG00000013228	rif1	61	55.267	Amphiprion_percula
ENSCLAG00000001517	RIF1	67	47.541	ENSATEG00000022887	rif1	67	47.541	Anabas_testudineus
ENSCLAG00000001517	RIF1	85	65.116	ENSAPLG00000007092	RIF1	89	65.116	Anas_platyrhynchos
ENSCLAG00000001517	RIF1	83	57.692	ENSACAG00000003714	RIF1	86	57.692	Anolis_carolinensis
ENSCLAG00000001517	RIF1	99	73.568	ENSANAG00000024840	RIF1	96	73.651	Aotus_nancymaae
ENSCLAG00000001517	RIF1	98	72.470	ENSBTAG00000021020	RIF1	99	72.427	Bos_taurus
ENSCLAG00000001517	RIF1	99	72.803	ENSCJAG00000003138	RIF1	96	72.887	Callithrix_jacchus
ENSCLAG00000001517	RIF1	99	72.837	ENSCAFG00000005670	RIF1	93	72.860	Canis_familiaris
ENSCLAG00000001517	RIF1	99	72.164	ENSCAFG00020016401	RIF1	96	72.187	Canis_lupus_dingo
ENSCLAG00000001517	RIF1	99	72.864	ENSCHIG00000020327	RIF1	96	72.655	Capra_hircus
ENSCLAG00000001517	RIF1	97	72.084	ENSTSYG00000008861	RIF1	96	72.127	Carlito_syrichta
ENSCLAG00000001517	RIF1	84	80.186	ENSCAPG00000008957	RIF1	94	80.186	Cavia_aperea
ENSCLAG00000001517	RIF1	100	80.076	ENSCPOG00000037898	RIF1	96	80.118	Cavia_porcellus
ENSCLAG00000001517	RIF1	99	71.662	ENSCCAG00000024760	RIF1	96	71.841	Cebus_capucinus
ENSCLAG00000001517	RIF1	99	74.110	ENSCATG00000033353	RIF1	96	74.330	Cercocebus_atys
ENSCLAG00000001517	RIF1	99	73.900	ENSCSAG00000016089	RIF1	96	74.121	Chlorocebus_sabaeus
ENSCLAG00000001517	RIF1	97	87.970	ENSCHOG00000007187	RIF1	93	87.970	Choloepus_hoffmanni
ENSCLAG00000001517	RIF1	86	69.374	ENSCPBG00000025885	RIF1	90	68.136	Chrysemys_picta_bellii
ENSCLAG00000001517	RIF1	99	72.613	ENSCANG00000028962	RIF1	96	73.313	Colobus_angolensis_palliatus
ENSCLAG00000001517	RIF1	99	67.865	ENSCGRG00001024589	Rif1	96	67.781	Cricetulus_griseus_chok1gshd
ENSCLAG00000001517	RIF1	99	69.160	ENSCGRG00000010713	Rif1	97	69.076	Cricetulus_griseus_crigri
ENSCLAG00000001517	RIF1	60	52.941	ENSCSEG00000003945	rif1	62	52.941	Cynoglossus_semilaevis
ENSCLAG00000001517	RIF1	99	70.984	ENSDNOG00000011194	RIF1	93	70.984	Dasypus_novemcinctus
ENSCLAG00000001517	RIF1	91	70.728	ENSETEG00000012421	RIF1	88	70.728	Echinops_telfairi
ENSCLAG00000001517	RIF1	97	93.233	ENSEASG00005023434	RIF1	98	93.233	Equus_asinus_asinus
ENSCLAG00000001517	RIF1	96	90.106	ENSECAG00000012679	RIF1	96	90.106	Equus_caballus
ENSCLAG00000001517	RIF1	64	51.552	ENSELUG00000006826	rif1	54	51.466	Esox_lucius
ENSCLAG00000001517	RIF1	99	73.278	ENSFCAG00000029742	RIF1	96	73.319	Felis_catus
ENSCLAG00000001517	RIF1	84	54.156	ENSFALG00000013874	RIF1	94	54.156	Ficedula_albicollis
ENSCLAG00000001517	RIF1	99	82.891	ENSFDAG00000006538	RIF1	96	82.891	Fukomys_damarensis
ENSCLAG00000001517	RIF1	62	50.523	ENSFHEG00000013721	rif1	64	49.358	Fundulus_heteroclitus
ENSCLAG00000001517	RIF1	56	49.462	ENSGMOG00000003517	rif1	83	49.462	Gadus_morhua
ENSCLAG00000001517	RIF1	81	62.941	ENSGALG00000012484	RIF1	90	62.941	Gallus_gallus
ENSCLAG00000001517	RIF1	62	50.479	ENSGAFG00000017196	rif1	64	52.720	Gambusia_affinis
ENSCLAG00000001517	RIF1	59	53.469	ENSGACG00000008579	rif1	61	53.659	Gasterosteus_aculeatus
ENSCLAG00000001517	RIF1	85	70.181	ENSGAGG00000012595	RIF1	93	70.517	Gopherus_agassizii
ENSCLAG00000001517	RIF1	89	90.532	ENSGGOG00000040178	RIF1	92	90.532	Gorilla_gorilla
ENSCLAG00000001517	RIF1	94	83.341	ENSHGLG00100009807	RIF1	96	83.341	Heterocephalus_glaber_male
ENSCLAG00000001517	RIF1	62	49.262	ENSHCOG00000015943	rif1	56	49.522	Hippocampus_comes
ENSCLAG00000001517	RIF1	99	74.302	ENSSTOG00000020712	RIF1	96	74.302	Ictidomys_tridecemlineatus
ENSCLAG00000001517	RIF1	99	68.106	ENSJJAG00000023000	Rif1	97	68.064	Jaculus_jaculus
ENSCLAG00000001517	RIF1	62	50.516	ENSKMAG00000002852	rif1	62	50.558	Kryptolebias_marmoratus
ENSCLAG00000001517	RIF1	62	50.855	ENSLBEG00000023196	rif1	56	50.810	Labrus_bergylta
ENSCLAG00000001517	RIF1	86	62.798	ENSLACG00000005425	RIF1	87	62.798	Latimeria_chalumnae
ENSCLAG00000001517	RIF1	63	53.586	ENSLOCG00000002657	rif1	78	51.140	Lepisosteus_oculatus
ENSCLAG00000001517	RIF1	99	72.218	ENSLAFG00000009796	RIF1	96	72.218	Loxodonta_africana
ENSCLAG00000001517	RIF1	99	74.194	ENSMFAG00000032233	RIF1	96	74.414	Macaca_fascicularis
ENSCLAG00000001517	RIF1	99	74.194	ENSMMUG00000008611	RIF1	96	74.414	Macaca_mulatta
ENSCLAG00000001517	RIF1	99	74.026	ENSMNEG00000031616	RIF1	96	74.246	Macaca_nemestrina
ENSCLAG00000001517	RIF1	99	74.068	ENSMLEG00000042945	RIF1	96	74.288	Mandrillus_leucophaeus
ENSCLAG00000001517	RIF1	62	48.586	ENSMAMG00000001745	rif1	61	48.630	Mastacembelus_armatus
ENSCLAG00000001517	RIF1	67	48.877	ENSMZEG00005020920	rif1	70	48.839	Maylandia_zebra
ENSCLAG00000001517	RIF1	83	58.011	ENSMGAG00000012732	RIF1	83	58.011	Meleagris_gallopavo
ENSCLAG00000001517	RIF1	98	91.635	ENSMAUG00000013158	Rif1	96	91.635	Mesocricetus_auratus
ENSCLAG00000001517	RIF1	99	75.428	ENSMICG00000046127	RIF1	96	75.595	Microcebus_murinus
ENSCLAG00000001517	RIF1	99	67.436	ENSMOCG00000009381	Rif1	96	67.492	Microtus_ochrogaster
ENSCLAG00000001517	RIF1	65	49.695	ENSMMOG00000006519	rif1	65	49.783	Mola_mola
ENSCLAG00000001517	RIF1	99	56.960	ENSMODG00000003703	RIF1	96	57.001	Monodelphis_domestica
ENSCLAG00000001517	RIF1	62	49.023	ENSMALG00000016759	rif1	68	48.980	Monopterus_albus
ENSCLAG00000001517	RIF1	99	67.212	MGP_CAROLIEiJ_G0023555	Rif1	96	67.212	Mus_caroli
ENSCLAG00000001517	RIF1	99	67.490	ENSMUSG00000036202	Rif1	96	67.490	Mus_musculus
ENSCLAG00000001517	RIF1	99	66.737	MGP_PahariEiJ_G0025006	Rif1	96	66.555	Mus_pahari
ENSCLAG00000001517	RIF1	99	67.282	MGP_SPRETEiJ_G0024476	Rif1	96	67.492	Mus_spretus
ENSCLAG00000001517	RIF1	99	73.275	ENSMPUG00000000371	RIF1	96	73.024	Mustela_putorius_furo
ENSCLAG00000001517	RIF1	93	69.736	ENSMLUG00000003376	RIF1	100	68.921	Myotis_lucifugus
ENSCLAG00000001517	RIF1	99	70.512	ENSNGAG00000009268	Rif1	96	70.650	Nannospalax_galili
ENSCLAG00000001517	RIF1	74	45.062	ENSNBRG00000014257	rif1	69	48.452	Neolamprologus_brichardi
ENSCLAG00000001517	RIF1	99	73.740	ENSNLEG00000010955	RIF1	96	73.963	Nomascus_leucogenys
ENSCLAG00000001517	RIF1	81	78.027	ENSMEUG00000007601	-	85	78.027	Notamacropus_eugenii
ENSCLAG00000001517	RIF1	100	82.177	ENSODEG00000003950	RIF1	96	82.261	Octodon_degus
ENSCLAG00000001517	RIF1	67	49.068	ENSONIG00000013657	rif1	67	49.030	Oreochromis_niloticus
ENSCLAG00000001517	RIF1	80	69.479	ENSOANG00000006078	-	81	69.479	Ornithorhynchus_anatinus
ENSCLAG00000001517	RIF1	99	71.423	ENSOCUG00000017435	RIF1	96	71.381	Oryctolagus_cuniculus
ENSCLAG00000001517	RIF1	63	49.132	ENSORLG00020001302	rif1	65	49.133	Oryzias_latipes_hni
ENSCLAG00000001517	RIF1	63	49.045	ENSORLG00015000009	rif1	65	49.133	Oryzias_latipes_hsok
ENSCLAG00000001517	RIF1	63	48.158	ENSOMEG00000021513	rif1	65	48.312	Oryzias_melastigma
ENSCLAG00000001517	RIF1	100	72.628	ENSOGAG00000006141	RIF1	96	72.628	Otolemur_garnettii
ENSCLAG00000001517	RIF1	99	73.420	ENSOARG00000008930	RIF1	96	73.211	Ovis_aries
ENSCLAG00000001517	RIF1	99	74.341	ENSPPAG00000023754	RIF1	96	74.561	Pan_paniscus
ENSCLAG00000001517	RIF1	99	73.205	ENSPPRG00000003618	RIF1	96	73.247	Panthera_pardus
ENSCLAG00000001517	RIF1	99	73.247	ENSPTIG00000020652	RIF1	96	73.289	Panthera_tigris_altaica
ENSCLAG00000001517	RIF1	99	74.383	ENSPTRG00000012534	RIF1	96	74.603	Pan_troglodytes
ENSCLAG00000001517	RIF1	99	73.984	ENSPANG00000008525	RIF1	96	74.246	Papio_anubis
ENSCLAG00000001517	RIF1	69	49.547	ENSPKIG00000004267	rif1	63	53.934	Paramormyrops_kingsleyae
ENSCLAG00000001517	RIF1	61	62.469	ENSPMGG00000016141	rif1	68	62.469	Periophthalmus_magnuspinnatus
ENSCLAG00000001517	RIF1	99	69.128	ENSPEMG00000000446	Rif1	97	68.960	Peromyscus_maniculatus_bairdii
ENSCLAG00000001517	RIF1	100	56.769	ENSPCIG00000009185	RIF1	96	56.977	Phascolarctos_cinereus
ENSCLAG00000001517	RIF1	58	51.724	ENSPFOG00000000554	-	69	51.724	Poecilia_formosa
ENSCLAG00000001517	RIF1	61	51.661	ENSPFOG00000017804	rif1	67	51.748	Poecilia_formosa
ENSCLAG00000001517	RIF1	61	51.167	ENSPLAG00000017945	rif1	70	51.167	Poecilia_latipinna
ENSCLAG00000001517	RIF1	55	49.460	ENSPMEG00000006897	-	68	49.460	Poecilia_mexicana
ENSCLAG00000001517	RIF1	61	51.169	ENSPREG00000018052	rif1	63	53.025	Poecilia_reticulata
ENSCLAG00000001517	RIF1	99	74.330	ENSPPYG00000012846	RIF1	96	74.466	Pongo_abelii
ENSCLAG00000001517	RIF1	82	86.408	ENSPCAG00000009032	RIF1	79	86.408	Procavia_capensis
ENSCLAG00000001517	RIF1	99	75.303	ENSPCOG00000027888	RIF1	96	75.564	Propithecus_coquereli
ENSCLAG00000001517	RIF1	92	87.406	ENSPVAG00000014276	RIF1	91	87.406	Pteropus_vampyrus
ENSCLAG00000001517	RIF1	67	47.233	ENSPNYG00000012940	rif1	69	47.196	Pundamilia_nyererei
ENSCLAG00000001517	RIF1	65	51.799	ENSPNAG00000016685	rif1	64	51.799	Pygocentrus_nattereri
ENSCLAG00000001517	RIF1	99	66.263	ENSRNOG00000054901	Rif1	96	66.402	Rattus_norvegicus
ENSCLAG00000001517	RIF1	99	73.157	ENSRBIG00000003704	RIF1	96	73.283	Rhinopithecus_bieti
ENSCLAG00000001517	RIF1	99	74.068	ENSRROG00000028206	RIF1	96	74.288	Rhinopithecus_roxellana
ENSCLAG00000001517	RIF1	97	72.845	ENSSBOG00000029530	RIF1	96	72.845	Saimiri_boliviensis_boliviensis
ENSCLAG00000001517	RIF1	61	54.145	ENSSFOG00015021539	rif1	73	51.020	Scleropages_formosus
ENSCLAG00000001517	RIF1	64	48.013	ENSSMAG00000011704	rif1	62	47.826	Scophthalmus_maximus
ENSCLAG00000001517	RIF1	63	51.049	ENSSDUG00000015632	rif1	71	48.031	Seriola_dumerili
ENSCLAG00000001517	RIF1	63	51.607	ENSSLDG00000019531	rif1	52	48.387	Seriola_lalandi_dorsalis
ENSCLAG00000001517	RIF1	60	87.500	ENSSARG00000007161	-	59	87.500	Sorex_araneus
ENSCLAG00000001517	RIF1	84	67.961	ENSSPUG00000003062	RIF1	88	67.961	Sphenodon_punctatus
ENSCLAG00000001517	RIF1	99	72.815	ENSSSCG00000016395	RIF1	96	72.993	Sus_scrofa
ENSCLAG00000001517	RIF1	61	49.235	ENSTRUG00000015808	rif1	65	48.130	Takifugu_rubripes
ENSCLAG00000001517	RIF1	64	48.930	ENSTNIG00000011538	rif1	66	48.930	Tetraodon_nigroviridis
ENSCLAG00000001517	RIF1	82	88.535	ENSTBEG00000016082	RIF1	78	88.535	Tupaia_belangeri
ENSCLAG00000001517	RIF1	99	74.142	ENSTTRG00000011190	RIF1	96	74.142	Tursiops_truncatus
ENSCLAG00000001517	RIF1	94	72.699	ENSUAMG00000026385	RIF1	99	72.699	Ursus_americanus
ENSCLAG00000001517	RIF1	99	73.871	ENSUMAG00000000337	RIF1	96	73.871	Ursus_maritimus
ENSCLAG00000001517	RIF1	99	71.848	ENSVPAG00000002162	RIF1	96	71.848	Vicugna_pacos
ENSCLAG00000001517	RIF1	99	72.647	ENSVVUG00000011293	RIF1	96	72.522	Vulpes_vulpes
ENSCLAG00000001517	RIF1	81	63.030	ENSXETG00000004530	rif1	64	47.385	Xenopus_tropicalis
ENSCLAG00000001517	RIF1	62	48.768	ENSXMAG00000000506	rif1	61	49.065	Xiphophorus_maculatus