EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001684 (Gene tree)
Gene ID: 102016758
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 159608 bases
Position: chrJH721903.1:6940523-7100130
Accession: 102016758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002328	RRM_1	PF00076.22	3.6e-38	1	3
ENSCLAP00000002328	RRM_1	PF00076.22	3.6e-38	2	3
ENSCLAP00000002328	RRM_1	PF00076.22	3.6e-38	3	3
ENSCLAP00000002325	RRM_1	PF00076.22	5.7e-38	1	3
ENSCLAP00000002325	RRM_1	PF00076.22	5.7e-38	2	3
ENSCLAP00000002325	RRM_1	PF00076.22	5.7e-38	3	3
ENSCLAP00000002326	RRM_1	PF00076.22	5.7e-38	1	3
ENSCLAP00000002326	RRM_1	PF00076.22	5.7e-38	2	3
ENSCLAP00000002326	RRM_1	PF00076.22	5.7e-38	3	3
ENSCLAP00000002327	RRM_1	PF00076.22	5.7e-38	1	3
ENSCLAP00000002327	RRM_1	PF00076.22	5.7e-38	2	3
ENSCLAP00000002327	RRM_1	PF00076.22	5.7e-38	3	3
ENSCLAP00000002324	RRM_1	PF00076.22	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002375	RBM47-201	4758	-	ENSCLAP00000002324	158 (aa)	-	-
ENSCLAT00000002376	RBM47-202	2237	-	ENSCLAP00000002325	591 (aa)	-	UPI00038EFCD3
ENSCLAT00000002377	RBM47-203	2359	XM_005391952	ENSCLAP00000002326	591 (aa)	XP_005392009	UPI00038EFCD3
ENSCLAT00000002378	RBM47-204	4898	XM_005391951	ENSCLAP00000002327	591 (aa)	XP_005392008	UPI00038EFCD3
ENSCLAT00000002379	RBM47-205	1569	-	ENSCLAP00000002328	522 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000001684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001684	RBM47	83	77.099	ENSCLAG00000011886	-	58	73.579
ENSCLAG00000001684	RBM47	87	68.116	ENSCLAG00000010424	A1CF	74	58.889
ENSCLAG00000001684	RBM47	88	57.042	ENSCLAG00000011851	SYNCRIP	73	57.692
ENSCLAG00000001684	RBM47	81	51.562	ENSCLAG00000012746	DND1	58	42.718
ENSCLAG00000001684	RBM47	84	77.273	ENSCLAG00000005846	-	64	73.000
ENSCLAG00000001684	RBM47	88	59.155	ENSCLAG00000012738	HNRNPR	71	45.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001684	RBM47	100	95.570	ENSG00000163694	RBM47	100	96.774	Homo_sapiens
ENSCLAG00000001684	RBM47	100	82.911	ENSAPOG00000011062	rbm47	100	81.698	Acanthochromis_polyacanthus
ENSCLAG00000001684	RBM47	100	97.067	ENSAMEG00000009672	RBM47	100	93.802	Ailuropoda_melanoleuca
ENSCLAG00000001684	RBM47	100	83.544	ENSACIG00000011531	rbm47	100	82.493	Amphilophus_citrinellus
ENSCLAG00000001684	RBM47	100	82.911	ENSAOCG00000022245	rbm47	100	81.698	Amphiprion_ocellaris
ENSCLAG00000001684	RBM47	100	82.911	ENSAPEG00000018304	rbm47	100	81.698	Amphiprion_percula
ENSCLAG00000001684	RBM47	100	77.907	ENSATEG00000018400	rbm47	94	85.915	Anabas_testudineus
ENSCLAG00000001684	RBM47	100	89.873	ENSAPLG00000013974	RBM47	100	86.869	Anas_platyrhynchos
ENSCLAG00000001684	RBM47	100	84.641	ENSACAG00000011833	RBM47	100	84.975	Anolis_carolinensis
ENSCLAG00000001684	RBM47	100	94.937	ENSANAG00000029440	RBM47	100	95.733	Aotus_nancymaae
ENSCLAG00000001684	RBM47	100	82.687	ENSACLG00000016902	rbm47	95	86.197	Astatotilapia_calliptera
ENSCLAG00000001684	RBM47	100	77.059	ENSAMXG00000021794	rbm47	95	83.240	Astyanax_mexicanus
ENSCLAG00000001684	RBM47	100	96.284	ENSBTAG00000002356	RBM47	100	96.284	Bos_taurus
ENSCLAG00000001684	RBM47	100	93.909	ENSCJAG00000019385	RBM47	100	95.467	Callithrix_jacchus
ENSCLAG00000001684	RBM47	96	93.684	ENSCAFG00000015898	RBM47	100	92.088	Canis_familiaris
ENSCLAG00000001684	RBM47	86	94.853	ENSCAFG00020010558	RBM47	94	94.164	Canis_lupus_dingo
ENSCLAG00000001684	RBM47	100	96.622	ENSCHIG00000026214	RBM47	100	96.622	Capra_hircus
ENSCLAG00000001684	RBM47	86	79.216	ENSTSYG00000033612	RBM47	93	78.039	Carlito_syrichta
ENSCLAG00000001684	RBM47	100	95.946	ENSCAPG00000008426	RBM47	100	96.622	Cavia_aperea
ENSCLAG00000001684	RBM47	100	98.400	ENSCPOG00000014100	RBM47	100	98.400	Cavia_porcellus
ENSCLAG00000001684	RBM47	100	94.304	ENSCCAG00000030129	-	100	96.000	Cebus_capucinus
ENSCLAG00000001684	RBM47	99	65.825	ENSCCAG00000024397	-	99	64.983	Cebus_capucinus
ENSCLAG00000001684	RBM47	100	95.570	ENSCATG00000042064	RBM47	100	96.533	Cercocebus_atys
ENSCLAG00000001684	RBM47	100	95.570	ENSCSAG00000017060	RBM47	100	93.782	Chlorocebus_sabaeus
ENSCLAG00000001684	RBM47	100	94.340	ENSCHOG00000011731	RBM47	88	88.764	Choloepus_hoffmanni
ENSCLAG00000001684	RBM47	100	91.223	ENSCPBG00000013831	RBM47	100	89.262	Chrysemys_picta_bellii
ENSCLAG00000001684	RBM47	100	95.570	ENSCANG00000019997	RBM47	100	96.533	Colobus_angolensis_palliatus
ENSCLAG00000001684	RBM47	100	93.122	ENSCGRG00001000623	-	100	93.617	Cricetulus_griseus_chok1gshd
ENSCLAG00000001684	RBM47	100	87.810	ENSCGRG00001020102	-	100	86.857	Cricetulus_griseus_chok1gshd
ENSCLAG00000001684	RBM47	100	92.405	ENSCGRG00000007762	-	100	92.405	Cricetulus_griseus_crigri
ENSCLAG00000001684	RBM47	100	87.429	ENSCGRG00000014760	-	100	86.476	Cricetulus_griseus_crigri
ENSCLAG00000001684	RBM47	100	79.747	ENSCSEG00000004545	rbm47	100	74.874	Cynoglossus_semilaevis
ENSCLAG00000001684	RBM47	100	82.278	ENSCVAG00000020144	rbm47	93	85.311	Cyprinodon_variegatus
ENSCLAG00000001684	RBM47	100	76.471	ENSDARG00000061985	rbm47	95	77.739	Danio_rerio
ENSCLAG00000001684	RBM47	100	94.304	ENSDNOG00000046854	RBM47	100	92.905	Dasypus_novemcinctus
ENSCLAG00000001684	RBM47	100	93.813	ENSDORG00000010144	Rbm47	100	93.144	Dipodomys_ordii
ENSCLAG00000001684	RBM47	100	93.467	ENSETEG00000009194	RBM47	100	92.630	Echinops_telfairi
ENSCLAG00000001684	RBM47	100	67.089	ENSEBUG00000011912	rbm47	96	74.928	Eptatretus_burgeri
ENSCLAG00000001684	RBM47	100	96.453	ENSEASG00005008443	RBM47	100	96.453	Equus_asinus_asinus
ENSCLAG00000001684	RBM47	100	96.453	ENSECAG00000004400	RBM47	100	96.453	Equus_caballus
ENSCLAG00000001684	RBM47	100	94.340	ENSEEUG00000001194	RBM47	75	96.104	Erinaceus_europaeus
ENSCLAG00000001684	RBM47	99	83.289	ENSELUG00000006148	rbm47	94	85.515	Esox_lucius
ENSCLAG00000001684	RBM47	100	95.570	ENSFCAG00000012399	RBM47	100	94.755	Felis_catus
ENSCLAG00000001684	RBM47	100	90.957	ENSFALG00000002861	RBM47	100	88.926	Ficedula_albicollis
ENSCLAG00000001684	RBM47	100	94.667	ENSFDAG00000016326	RBM47	100	94.585	Fukomys_damarensis
ENSCLAG00000001684	RBM47	100	80.380	ENSFHEG00000007938	rbm47	100	75.126	Fundulus_heteroclitus
ENSCLAG00000001684	RBM47	100	80.506	ENSGMOG00000014802	rbm47	94	84.637	Gadus_morhua
ENSCLAG00000001684	RBM47	100	87.342	ENSGALG00000014267	RBM47	99	90.426	Gallus_gallus
ENSCLAG00000001684	RBM47	100	80.380	ENSGAFG00000020571	rbm47	98	81.333	Gambusia_affinis
ENSCLAG00000001684	RBM47	100	79.847	ENSGACG00000016223	rbm47	94	83.799	Gasterosteus_aculeatus
ENSCLAG00000001684	RBM47	100	91.223	ENSGAGG00000020051	RBM47	100	89.430	Gopherus_agassizii
ENSCLAG00000001684	RBM47	100	95.570	ENSGGOG00000001367	RBM47	100	96.533	Gorilla_gorilla
ENSCLAG00000001684	RBM47	100	82.687	ENSHBUG00000003520	rbm47	95	86.197	Haplochromis_burtoni
ENSCLAG00000001684	RBM47	100	95.570	ENSHGLG00000016914	RBM47	100	95.570	Heterocephalus_glaber_female
ENSCLAG00000001684	RBM47	100	95.785	ENSHGLG00100014028	-	100	97.279	Heterocephalus_glaber_male
ENSCLAG00000001684	RBM47	99	87.898	ENSHGLG00100003071	-	100	85.448	Heterocephalus_glaber_male
ENSCLAG00000001684	RBM47	100	81.875	ENSHCOG00000002074	rbm47	99	82.058	Hippocampus_comes
ENSCLAG00000001684	RBM47	100	80.103	ENSIPUG00000004743	rbm47	100	80.371	Ictalurus_punctatus
ENSCLAG00000001684	RBM47	100	96.267	ENSSTOG00000004727	RBM47	100	95.462	Ictidomys_tridecemlineatus
ENSCLAG00000001684	RBM47	100	92.630	ENSJJAG00000013823	Rbm47	100	92.462	Jaculus_jaculus
ENSCLAG00000001684	RBM47	100	80.625	ENSKMAG00000000084	rbm47	93	84.594	Kryptolebias_marmoratus
ENSCLAG00000001684	RBM47	100	79.747	ENSLBEG00000008436	rbm47	100	80.637	Labrus_bergylta
ENSCLAG00000001684	RBM47	100	87.533	ENSLACG00000007196	RBM47	100	83.838	Latimeria_chalumnae
ENSCLAG00000001684	RBM47	100	86.709	ENSLOCG00000012966	rbm47	95	80.135	Lepisosteus_oculatus
ENSCLAG00000001684	RBM47	100	94.286	ENSLAFG00000011998	RBM47	100	92.941	Loxodonta_africana
ENSCLAG00000001684	RBM47	100	95.570	ENSMFAG00000037967	RBM47	100	96.533	Macaca_fascicularis
ENSCLAG00000001684	RBM47	100	95.570	ENSMMUG00000012036	RBM47	100	96.373	Macaca_mulatta
ENSCLAG00000001684	RBM47	100	95.570	ENSMNEG00000040774	RBM47	100	96.267	Macaca_nemestrina
ENSCLAG00000001684	RBM47	100	97.143	ENSMLEG00000041432	RBM47	100	97.143	Mandrillus_leucophaeus
ENSCLAG00000001684	RBM47	100	79.532	ENSMAMG00000019143	rbm47	95	85.915	Mastacembelus_armatus
ENSCLAG00000001684	RBM47	100	82.687	ENSMZEG00005023659	rbm47	95	86.197	Maylandia_zebra
ENSCLAG00000001684	RBM47	100	88.629	ENSMGAG00000012226	RBM47	100	88.462	Meleagris_gallopavo
ENSCLAG00000001684	RBM47	100	92.405	ENSMAUG00000006493	Rbm47	100	93.369	Mesocricetus_auratus
ENSCLAG00000001684	RBM47	100	89.171	ENSMICG00000026417	RBM47	100	90.667	Microcebus_murinus
ENSCLAG00000001684	RBM47	100	93.038	ENSMOCG00000021170	Rbm47	100	93.883	Microtus_ochrogaster
ENSCLAG00000001684	RBM47	100	77.193	ENSMMOG00000007260	rbm47	95	84.034	Mola_mola
ENSCLAG00000001684	RBM47	100	86.076	ENSMODG00000020561	-	100	80.372	Monodelphis_domestica
ENSCLAG00000001684	RBM47	100	91.467	ENSMODG00000007003	RBM47	100	89.376	Monodelphis_domestica
ENSCLAG00000001684	RBM47	87	81.818	ENSMODG00000015426	-	98	78.165	Monodelphis_domestica
ENSCLAG00000001684	RBM47	100	81.491	ENSMALG00000005167	rbm47	100	82.493	Monopterus_albus
ENSCLAG00000001684	RBM47	100	92.857	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.351	Mus_caroli
ENSCLAG00000001684	RBM47	100	93.122	ENSMUSG00000070780	Rbm47	100	93.617	Mus_musculus
ENSCLAG00000001684	RBM47	100	93.122	MGP_PahariEiJ_G0017040	Rbm47	100	93.617	Mus_pahari
ENSCLAG00000001684	RBM47	100	92.061	MGP_SPRETEiJ_G0028253	Rbm47	100	93.617	Mus_spretus
ENSCLAG00000001684	RBM47	100	95.570	ENSMPUG00000006177	RBM47	94	94.613	Mustela_putorius_furo
ENSCLAG00000001684	RBM47	100	93.671	ENSMLUG00000000889	RBM47	100	92.243	Myotis_lucifugus
ENSCLAG00000001684	RBM47	100	94.937	ENSNGAG00000003325	Rbm47	100	91.946	Nannospalax_galili
ENSCLAG00000001684	RBM47	100	82.946	ENSNBRG00000015092	rbm47	95	85.994	Neolamprologus_brichardi
ENSCLAG00000001684	RBM47	100	95.570	ENSNLEG00000017151	RBM47	100	96.533	Nomascus_leucogenys
ENSCLAG00000001684	RBM47	91	92.308	ENSMEUG00000009516	-	99	86.792	Notamacropus_eugenii
ENSCLAG00000001684	RBM47	85	97.095	ENSOPRG00000016507	-	75	97.095	Ochotona_princeps
ENSCLAG00000001684	RBM47	100	99.320	ENSODEG00000004873	RBM47	100	98.477	Octodon_degus
ENSCLAG00000001684	RBM47	100	81.538	ENSONIG00000009061	rbm47	94	85.434	Oreochromis_niloticus
ENSCLAG00000001684	RBM47	100	86.288	ENSOANG00000008978	RBM47	100	86.455	Ornithorhynchus_anatinus
ENSCLAG00000001684	RBM47	100	95.608	ENSOCUG00000012034	RBM47	100	95.101	Oryctolagus_cuniculus
ENSCLAG00000001684	RBM47	100	84.840	ENSORLG00000005847	rbm47	100	82.011	Oryzias_latipes
ENSCLAG00000001684	RBM47	100	84.840	ENSORLG00020005154	rbm47	100	82.011	Oryzias_latipes_hni
ENSCLAG00000001684	RBM47	100	85.106	ENSORLG00015000066	rbm47	100	82.275	Oryzias_latipes_hsok
ENSCLAG00000001684	RBM47	100	85.067	ENSOMEG00000010730	rbm47	100	82.493	Oryzias_melastigma
ENSCLAG00000001684	RBM47	100	88.000	ENSOGAG00000025193	-	100	85.618	Otolemur_garnettii
ENSCLAG00000001684	RBM47	100	94.937	ENSOGAG00000029367	-	100	94.276	Otolemur_garnettii
ENSCLAG00000001684	RBM47	100	87.162	ENSOARG00000012711	RBM47	100	86.993	Ovis_aries
ENSCLAG00000001684	RBM47	100	95.570	ENSPPAG00000029763	RBM47	100	93.909	Pan_paniscus
ENSCLAG00000001684	RBM47	100	95.570	ENSPPRG00000012873	RBM47	100	96.533	Panthera_pardus
ENSCLAG00000001684	RBM47	85	92.231	ENSPTIG00000017046	RBM47	100	91.833	Panthera_tigris_altaica
ENSCLAG00000001684	RBM47	100	95.570	ENSPTRG00000016006	RBM47	100	96.533	Pan_troglodytes
ENSCLAG00000001684	RBM47	100	95.570	ENSPANG00000005980	RBM47	100	96.533	Papio_anubis
ENSCLAG00000001684	RBM47	96	85.876	ENSPKIG00000005037	rbm47	100	80.519	Paramormyrops_kingsleyae
ENSCLAG00000001684	RBM47	94	83.444	ENSPKIG00000013431	RBM47	92	85.593	Paramormyrops_kingsleyae
ENSCLAG00000001684	RBM47	100	88.608	ENSPSIG00000017516	RBM47	97	90.720	Pelodiscus_sinensis
ENSCLAG00000001684	RBM47	100	81.013	ENSPMGG00000018540	rbm47	100	81.746	Periophthalmus_magnuspinnatus
ENSCLAG00000001684	RBM47	100	93.038	ENSPEMG00000011088	Rbm47	100	93.883	Peromyscus_maniculatus_bairdii
ENSCLAG00000001684	RBM47	100	79.397	ENSPFOG00000007997	rbm47	94	83.754	Poecilia_formosa
ENSCLAG00000001684	RBM47	100	82.400	ENSPLAG00000002072	rbm47	100	80.800	Poecilia_latipinna
ENSCLAG00000001684	RBM47	100	82.667	ENSPMEG00000017492	rbm47	100	81.067	Poecilia_mexicana
ENSCLAG00000001684	RBM47	100	82.667	ENSPREG00000008456	rbm47	100	81.067	Poecilia_reticulata
ENSCLAG00000001684	RBM47	98	82.880	ENSPPYG00000014688	RBM47	98	80.928	Pongo_abelii
ENSCLAG00000001684	RBM47	100	94.304	ENSPCAG00000011879	RBM47	81	95.750	Procavia_capensis
ENSCLAG00000001684	RBM47	100	91.709	ENSPCOG00000023451	RBM47	100	93.067	Propithecus_coquereli
ENSCLAG00000001684	RBM47	100	93.671	ENSPVAG00000003812	RBM47	100	93.277	Pteropus_vampyrus
ENSCLAG00000001684	RBM47	100	82.687	ENSPNYG00000022868	rbm47	95	85.714	Pundamilia_nyererei
ENSCLAG00000001684	RBM47	100	75.882	ENSPNAG00000007940	rbm47	95	83.799	Pygocentrus_nattereri
ENSCLAG00000001684	RBM47	100	93.386	ENSRNOG00000002408	Rbm47	100	91.919	Rattus_norvegicus
ENSCLAG00000001684	RBM47	100	95.570	ENSRBIG00000039601	RBM47	100	96.800	Rhinopithecus_bieti
ENSCLAG00000001684	RBM47	100	95.570	ENSRROG00000044696	RBM47	100	96.800	Rhinopithecus_roxellana
ENSCLAG00000001684	RBM47	100	94.304	ENSSBOG00000028475	RBM47	100	95.455	Saimiri_boliviensis_boliviensis
ENSCLAG00000001684	RBM47	100	91.733	ENSSHAG00000017576	RBM47	100	90.863	Sarcophilus_harrisii
ENSCLAG00000001684	RBM47	93	81.912	ENSSFOG00015012445	rbm47	100	80.463	Scleropages_formosus
ENSCLAG00000001684	RBM47	100	81.013	ENSSFOG00015024101	RBM47	100	73.367	Scleropages_formosus
ENSCLAG00000001684	RBM47	100	75.581	ENSSMAG00000009744	rbm47	94	83.380	Scophthalmus_maximus
ENSCLAG00000001684	RBM47	100	82.911	ENSSDUG00000022684	rbm47	100	82.493	Seriola_dumerili
ENSCLAG00000001684	RBM47	100	82.911	ENSSLDG00000003109	rbm47	100	82.228	Seriola_lalandi_dorsalis
ENSCLAG00000001684	RBM47	100	96.203	ENSSARG00000001735	RBM47	84	95.973	Sorex_araneus
ENSCLAG00000001684	RBM47	100	86.364	ENSSPUG00000007515	RBM47	100	89.333	Sphenodon_punctatus
ENSCLAG00000001684	RBM47	100	85.443	ENSSPAG00000001257	rbm47	100	82.493	Stegastes_partitus
ENSCLAG00000001684	RBM47	100	94.764	ENSSSCG00000008796	RBM47	100	95.101	Sus_scrofa
ENSCLAG00000001684	RBM47	100	90.957	ENSTGUG00000008705	RBM47	100	88.403	Taeniopygia_guttata
ENSCLAG00000001684	RBM47	94	83.893	ENSTRUG00000014050	rbm47	100	74.790	Takifugu_rubripes
ENSCLAG00000001684	RBM47	100	77.778	ENSTNIG00000006127	rbm47	94	78.049	Tetraodon_nigroviridis
ENSCLAG00000001684	RBM47	100	95.570	ENSTBEG00000001607	RBM47	76	91.733	Tupaia_belangeri
ENSCLAG00000001684	RBM47	100	95.608	ENSTTRG00000002839	RBM47	100	95.608	Tursiops_truncatus
ENSCLAG00000001684	RBM47	100	96.203	ENSUAMG00000021346	RBM47	100	94.444	Ursus_americanus
ENSCLAG00000001684	RBM47	92	95.205	ENSVPAG00000000641	-	57	96.296	Vicugna_pacos
ENSCLAG00000001684	RBM47	96	94.728	ENSVVUG00000014774	RBM47	100	93.086	Vulpes_vulpes
ENSCLAG00000001684	RBM47	100	87.831	ENSXETG00000012802	rbm47	100	84.512	Xenopus_tropicalis
ENSCLAG00000001684	RBM47	100	80.380	ENSXCOG00000000780	rbm47	100	81.067	Xiphophorus_couchianus
ENSCLAG00000001684	RBM47	100	82.400	ENSXMAG00000009874	rbm47	100	80.371	Xiphophorus_maculatus