EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000001702 (Gene tree)
Gene ID: 102024393
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 22392 bases
Position: chrJH722030.1:814725-837116
Accession: 102024393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002349	TruB_N	PF01509.18	2.2e-28	1	1
ENSCLAP00000002348	TruB_N	PF01509.18	2.2e-28	1	1
ENSCLAP00000002350	TruB_N	PF01509.18	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002400	TRUB2-202	5612	XM_005413537	ENSCLAP00000002349	327 (aa)	XP_005413594	UPI00038EBAF1
ENSCLAT00000002401	TRUB2-203	585	-	ENSCLAP00000002350	195 (aa)	-	-
ENSCLAT00000002399	TRUB2-201	993	-	ENSCLAP00000002348	330 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000001702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001702	TRUB2	99	80.923	ENSG00000167112	TRUB2	98	81.173	Homo_sapiens
ENSCLAG00000001702	TRUB2	85	43.165	ENSAPOG00000018284	-	76	60.305	Acanthochromis_polyacanthus
ENSCLAG00000001702	TRUB2	63	58.049	ENSAPOG00000015733	trub2	74	58.049	Acanthochromis_polyacanthus
ENSCLAG00000001702	TRUB2	99	80.000	ENSAMEG00000015395	TRUB2	98	80.247	Ailuropoda_melanoleuca
ENSCLAG00000001702	TRUB2	85	53.597	ENSACIG00000016500	trub2	84	53.597	Amphilophus_citrinellus
ENSCLAG00000001702	TRUB2	88	54.651	ENSAOCG00000002330	trub2	82	57.194	Amphiprion_ocellaris
ENSCLAG00000001702	TRUB2	88	55.233	ENSAPEG00000013177	trub2	82	57.554	Amphiprion_percula
ENSCLAG00000001702	TRUB2	95	51.596	ENSATEG00000011371	trub2	92	53.265	Anabas_testudineus
ENSCLAG00000001702	TRUB2	88	59.516	ENSAPLG00000009254	TRUB2	94	60.000	Anas_platyrhynchos
ENSCLAG00000001702	TRUB2	97	59.788	ENSACAG00000007331	TRUB2	90	65.424	Anolis_carolinensis
ENSCLAG00000001702	TRUB2	95	81.994	ENSANAG00000036234	TRUB2	100	81.994	Aotus_nancymaae
ENSCLAG00000001702	TRUB2	87	52.632	ENSACLG00000010793	trub2	84	54.317	Astatotilapia_calliptera
ENSCLAG00000001702	TRUB2	92	54.455	ENSAMXG00000031679	trub2	86	54.455	Astyanax_mexicanus
ENSCLAG00000001702	TRUB2	52	80.702	ENSBTAG00000055269	-	81	79.213	Bos_taurus
ENSCLAG00000001702	TRUB2	84	82.209	ENSBTAG00000004663	TRUB2	99	82.209	Bos_taurus
ENSCLAG00000001702	TRUB2	99	80.308	ENSCJAG00000020009	TRUB2	98	80.556	Callithrix_jacchus
ENSCLAG00000001702	TRUB2	99	79.385	ENSCAFG00000020068	TRUB2	98	79.630	Canis_familiaris
ENSCLAG00000001702	TRUB2	91	79.213	ENSCAFG00020017325	-	100	79.775	Canis_lupus_dingo
ENSCLAG00000001702	TRUB2	99	80.805	ENSCHIG00000021160	TRUB2	98	80.805	Capra_hircus
ENSCLAG00000001702	TRUB2	98	82.555	ENSTSYG00000034163	TRUB2	97	82.555	Carlito_syrichta
ENSCLAG00000001702	TRUB2	88	88.927	ENSCAPG00000000223	TRUB2	100	91.083	Cavia_aperea
ENSCLAG00000001702	TRUB2	99	89.264	ENSCPOG00000013535	TRUB2	100	91.753	Cavia_porcellus
ENSCLAG00000001702	TRUB2	98	80.312	ENSCCAG00000026531	-	98	80.312	Cebus_capucinus
ENSCLAG00000001702	TRUB2	98	77.429	ENSCCAG00000028463	-	97	76.562	Cebus_capucinus
ENSCLAG00000001702	TRUB2	99	81.846	ENSCATG00000038234	TRUB2	98	82.099	Cercocebus_atys
ENSCLAG00000001702	TRUB2	99	77.538	ENSCSAG00000014117	TRUB2	98	77.538	Chlorocebus_sabaeus
ENSCLAG00000001702	TRUB2	99	81.846	ENSCHOG00000001555	TRUB2	98	82.099	Choloepus_hoffmanni
ENSCLAG00000001702	TRUB2	92	62.126	ENSCPBG00000025186	TRUB2	89	62.126	Chrysemys_picta_bellii
ENSCLAG00000001702	TRUB2	87	36.628	ENSCSAVG00000003930	-	90	34.471	Ciona_savignyi
ENSCLAG00000001702	TRUB2	99	73.538	ENSCANG00000016135	TRUB2	98	73.765	Colobus_angolensis_palliatus
ENSCLAG00000001702	TRUB2	99	82.154	ENSCGRG00001024441	Trub2	98	82.418	Cricetulus_griseus_chok1gshd
ENSCLAG00000001702	TRUB2	99	82.154	ENSCGRG00000005633	Trub2	98	82.353	Cricetulus_griseus_crigri
ENSCLAG00000001702	TRUB2	87	52.047	ENSCSEG00000001331	trub2	83	53.237	Cynoglossus_semilaevis
ENSCLAG00000001702	TRUB2	92	52.581	ENSCVAG00000009901	trub2	92	52.581	Cyprinodon_variegatus
ENSCLAG00000001702	TRUB2	96	52.381	ENSDARG00000028379	trub2	79	54.317	Danio_rerio
ENSCLAG00000001702	TRUB2	99	80.615	ENSDNOG00000045679	-	98	80.864	Dasypus_novemcinctus
ENSCLAG00000001702	TRUB2	99	54.769	ENSDNOG00000043967	-	98	54.103	Dasypus_novemcinctus
ENSCLAG00000001702	TRUB2	99	82.407	ENSDORG00000016222	Trub2	98	84.194	Dipodomys_ordii
ENSCLAG00000001702	TRUB2	82	31.852	FBgn0033060	CG7849	85	31.852	Drosophila_melanogaster
ENSCLAG00000001702	TRUB2	99	78.723	ENSETEG00000009114	TRUB2	99	78.723	Echinops_telfairi
ENSCLAG00000001702	TRUB2	71	46.341	ENSEBUG00000015723	trub2	87	46.341	Eptatretus_burgeri
ENSCLAG00000001702	TRUB2	99	82.154	ENSEASG00005016819	TRUB2	98	82.407	Equus_asinus_asinus
ENSCLAG00000001702	TRUB2	99	82.769	ENSECAG00000023520	TRUB2	98	83.025	Equus_caballus
ENSCLAG00000001702	TRUB2	94	83.495	ENSEEUG00000008908	TRUB2	94	83.495	Erinaceus_europaeus
ENSCLAG00000001702	TRUB2	96	50.000	ENSELUG00000002376	trub2	91	55.326	Esox_lucius
ENSCLAG00000001702	TRUB2	100	79.331	ENSFCAG00000005839	TRUB2	100	79.331	Felis_catus
ENSCLAG00000001702	TRUB2	81	65.152	ENSFALG00000001364	TRUB2	85	66.288	Ficedula_albicollis
ENSCLAG00000001702	TRUB2	99	86.598	ENSFDAG00000021374	TRUB2	100	86.598	Fukomys_damarensis
ENSCLAG00000001702	TRUB2	85	50.719	ENSFHEG00000014655	trub2	82	50.719	Fundulus_heteroclitus
ENSCLAG00000001702	TRUB2	84	46.377	ENSGMOG00000000981	trub2	92	46.377	Gadus_morhua
ENSCLAG00000001702	TRUB2	91	61.409	ENSGALG00000004920	TRUB2	73	61.409	Gallus_gallus
ENSCLAG00000001702	TRUB2	87	54.118	ENSGAFG00000010107	trub2	84	55.124	Gambusia_affinis
ENSCLAG00000001702	TRUB2	88	53.757	ENSGACG00000001476	trub2	84	55.556	Gasterosteus_aculeatus
ENSCLAG00000001702	TRUB2	90	64.966	ENSGAGG00000022872	TRUB2	87	64.966	Gopherus_agassizii
ENSCLAG00000001702	TRUB2	99	81.538	ENSGGOG00000014780	TRUB2	98	81.790	Gorilla_gorilla
ENSCLAG00000001702	TRUB2	85	55.036	ENSHBUG00000022384	trub2	84	55.036	Haplochromis_burtoni
ENSCLAG00000001702	TRUB2	100	83.988	ENSHGLG00000016715	TRUB2	100	83.988	Heterocephalus_glaber_female
ENSCLAG00000001702	TRUB2	100	83.988	ENSHGLG00100016548	TRUB2	100	83.988	Heterocephalus_glaber_male
ENSCLAG00000001702	TRUB2	89	54.598	ENSHCOG00000017748	trub2	85	56.475	Hippocampus_comes
ENSCLAG00000001702	TRUB2	97	49.215	ENSIPUG00000017725	hdhd3	51	53.584	Ictalurus_punctatus
ENSCLAG00000001702	TRUB2	99	81.595	ENSSTOG00000008024	-	100	80.412	Ictidomys_tridecemlineatus
ENSCLAG00000001702	TRUB2	98	81.677	ENSSTOG00000022617	-	98	81.677	Ictidomys_tridecemlineatus
ENSCLAG00000001702	TRUB2	99	73.620	ENSJJAG00000019181	Trub2	98	73.846	Jaculus_jaculus
ENSCLAG00000001702	TRUB2	87	52.941	ENSKMAG00000007861	trub2	83	54.874	Kryptolebias_marmoratus
ENSCLAG00000001702	TRUB2	93	50.654	ENSLBEG00000000907	trub2	90	50.654	Labrus_bergylta
ENSCLAG00000001702	TRUB2	87	63.314	ENSLACG00000001515	TRUB2	85	63.287	Latimeria_chalumnae
ENSCLAG00000001702	TRUB2	87	61.047	ENSLOCG00000000885	trub2	96	58.904	Lepisosteus_oculatus
ENSCLAG00000001702	TRUB2	100	77.949	ENSLAFG00000002174	TRUB2	100	84.818	Loxodonta_africana
ENSCLAG00000001702	TRUB2	100	80.967	ENSMFAG00000000881	TRUB2	100	80.967	Macaca_fascicularis
ENSCLAG00000001702	TRUB2	100	80.665	ENSMMUG00000014146	TRUB2	100	80.665	Macaca_mulatta
ENSCLAG00000001702	TRUB2	100	80.665	ENSMNEG00000011189	TRUB2	100	80.665	Macaca_nemestrina
ENSCLAG00000001702	TRUB2	99	82.716	ENSMLEG00000037270	TRUB2	99	81.763	Mandrillus_leucophaeus
ENSCLAG00000001702	TRUB2	88	54.070	ENSMAMG00000023643	trub2	92	56.115	Mastacembelus_armatus
ENSCLAG00000001702	TRUB2	85	54.676	ENSMZEG00005016018	trub2	84	54.676	Maylandia_zebra
ENSCLAG00000001702	TRUB2	61	66.667	ENSMGAG00000003894	TRUB2	99	66.667	Meleagris_gallopavo
ENSCLAG00000001702	TRUB2	99	84.021	ENSMAUG00000010403	Trub2	100	84.021	Mesocricetus_auratus
ENSCLAG00000001702	TRUB2	100	78.550	ENSMICG00000047032	TRUB2	100	78.550	Microcebus_murinus
ENSCLAG00000001702	TRUB2	91	86.957	ENSMOCG00000014291	Trub2	99	86.957	Microtus_ochrogaster
ENSCLAG00000001702	TRUB2	96	53.158	ENSMMOG00000021674	trub2	86	56.989	Mola_mola
ENSCLAG00000001702	TRUB2	98	65.969	ENSMODG00000005940	TRUB2	99	72.945	Monodelphis_domestica
ENSCLAG00000001702	TRUB2	96	53.368	ENSMALG00000021231	trub2	83	58.156	Monopterus_albus
ENSCLAG00000001702	TRUB2	99	81.424	MGP_CAROLIEiJ_G0023368	Trub2	100	81.959	Mus_caroli
ENSCLAG00000001702	TRUB2	99	82.353	ENSMUSG00000039826	Trub2	100	83.505	Mus_musculus
ENSCLAG00000001702	TRUB2	99	82.474	MGP_PahariEiJ_G0024826	Trub2	100	82.474	Mus_pahari
ENSCLAG00000001702	TRUB2	99	84.536	MGP_SPRETEiJ_G0024286	Trub2	100	84.536	Mus_spretus
ENSCLAG00000001702	TRUB2	99	78.154	ENSMPUG00000013206	TRUB2	89	78.395	Mustela_putorius_furo
ENSCLAG00000001702	TRUB2	99	81.734	ENSMLUG00000005256	TRUB2	99	80.851	Myotis_lucifugus
ENSCLAG00000001702	TRUB2	99	82.154	ENSNGAG00000018679	Trub2	98	82.353	Nannospalax_galili
ENSCLAG00000001702	TRUB2	87	53.488	ENSNBRG00000016294	trub2	84	54.839	Neolamprologus_brichardi
ENSCLAG00000001702	TRUB2	99	80.000	ENSNLEG00000017556	TRUB2	98	80.247	Nomascus_leucogenys
ENSCLAG00000001702	TRUB2	100	66.667	ENSMEUG00000000484	TRUB2	95	73.986	Notamacropus_eugenii
ENSCLAG00000001702	TRUB2	97	81.703	ENSOPRG00000001981	TRUB2	96	81.703	Ochotona_princeps
ENSCLAG00000001702	TRUB2	100	87.179	ENSODEG00000017292	TRUB2	100	87.179	Octodon_degus
ENSCLAG00000001702	TRUB2	87	52.632	ENSONIG00000004230	trub2	84	54.317	Oreochromis_niloticus
ENSCLAG00000001702	TRUB2	80	73.077	ENSOANG00000029023	-	83	77.005	Ornithorhynchus_anatinus
ENSCLAG00000001702	TRUB2	98	81.366	ENSOCUG00000026296	TRUB2	89	81.481	Oryctolagus_cuniculus
ENSCLAG00000001702	TRUB2	91	53.020	ENSORLG00000020011	trub2	89	53.020	Oryzias_latipes
ENSCLAG00000001702	TRUB2	91	53.199	ENSORLG00020011028	trub2	86	53.199	Oryzias_latipes_hni
ENSCLAG00000001702	TRUB2	91	53.199	ENSORLG00015007494	trub2	90	53.199	Oryzias_latipes_hsok
ENSCLAG00000001702	TRUB2	88	56.395	ENSOMEG00000006702	trub2	84	57.554	Oryzias_melastigma
ENSCLAG00000001702	TRUB2	80	80.769	ENSOGAG00000003511	-	95	80.769	Otolemur_garnettii
ENSCLAG00000001702	TRUB2	75	78.279	ENSOARG00000003785	-	97	78.279	Ovis_aries
ENSCLAG00000001702	TRUB2	100	80.665	ENSOARG00000010579	-	100	80.665	Ovis_aries
ENSCLAG00000001702	TRUB2	99	81.538	ENSPPAG00000043146	TRUB2	98	81.790	Pan_paniscus
ENSCLAG00000001702	TRUB2	100	79.331	ENSPPRG00000006307	TRUB2	100	79.331	Panthera_pardus
ENSCLAG00000001702	TRUB2	100	79.027	ENSPTIG00000012366	TRUB2	100	79.027	Panthera_tigris_altaica
ENSCLAG00000001702	TRUB2	99	81.538	ENSPTRG00000052151	-	98	81.790	Pan_troglodytes
ENSCLAG00000001702	TRUB2	99	81.538	ENSPTRG00000021423	TRUB2	98	81.790	Pan_troglodytes
ENSCLAG00000001702	TRUB2	99	82.407	ENSPANG00000025856	TRUB2	99	81.459	Papio_anubis
ENSCLAG00000001702	TRUB2	87	55.294	ENSPKIG00000019769	trub2	90	55.072	Paramormyrops_kingsleyae
ENSCLAG00000001702	TRUB2	89	61.301	ENSPSIG00000015701	TRUB2	97	61.301	Pelodiscus_sinensis
ENSCLAG00000001702	TRUB2	96	49.057	ENSPMGG00000010206	trub2	99	49.057	Periophthalmus_magnuspinnatus
ENSCLAG00000001702	TRUB2	99	82.822	ENSPEMG00000017893	Trub2	98	84.153	Peromyscus_maniculatus_bairdii
ENSCLAG00000001702	TRUB2	100	67.179	ENSPCIG00000026731	TRUB2	95	73.986	Phascolarctos_cinereus
ENSCLAG00000001702	TRUB2	87	53.488	ENSPFOG00000018018	trub2	78	52.843	Poecilia_formosa
ENSCLAG00000001702	TRUB2	87	53.488	ENSPLAG00000010484	trub2	85	52.843	Poecilia_latipinna
ENSCLAG00000001702	TRUB2	91	52.508	ENSPMEG00000012913	trub2	88	52.508	Poecilia_mexicana
ENSCLAG00000001702	TRUB2	87	52.353	ENSPREG00000002549	trub2	87	52.013	Poecilia_reticulata
ENSCLAG00000001702	TRUB2	99	80.923	ENSPPYG00000019650	TRUB2	99	81.173	Pongo_abelii
ENSCLAG00000001702	TRUB2	99	81.846	ENSPCAG00000015068	TRUB2	98	82.099	Procavia_capensis
ENSCLAG00000001702	TRUB2	100	80.967	ENSPCOG00000017100	TRUB2	100	80.967	Propithecus_coquereli
ENSCLAG00000001702	TRUB2	91	82.492	ENSPVAG00000001224	TRUB2	99	82.492	Pteropus_vampyrus
ENSCLAG00000001702	TRUB2	85	54.676	ENSPNYG00000013666	trub2	84	54.676	Pundamilia_nyererei
ENSCLAG00000001702	TRUB2	94	52.769	ENSPNAG00000017292	trub2	87	52.769	Pygocentrus_nattereri
ENSCLAG00000001702	TRUB2	97	81.388	ENSRNOG00000043189	Trub2	98	81.388	Rattus_norvegicus
ENSCLAG00000001702	TRUB2	99	74.769	ENSRBIG00000006965	TRUB2	98	75.000	Rhinopithecus_bieti
ENSCLAG00000001702	TRUB2	99	82.462	ENSRROG00000042928	TRUB2	98	82.716	Rhinopithecus_roxellana
ENSCLAG00000001702	TRUB2	99	80.000	ENSSBOG00000022439	TRUB2	98	80.247	Saimiri_boliviensis_boliviensis
ENSCLAG00000001702	TRUB2	87	55.621	ENSSFOG00015013391	trub2	89	56.475	Scleropages_formosus
ENSCLAG00000001702	TRUB2	88	56.395	ENSSMAG00000020820	trub2	84	57.554	Scophthalmus_maximus
ENSCLAG00000001702	TRUB2	88	52.907	ENSSDUG00000016928	trub2	83	55.036	Seriola_dumerili
ENSCLAG00000001702	TRUB2	88	52.907	ENSSLDG00000024701	trub2	83	55.036	Seriola_lalandi_dorsalis
ENSCLAG00000001702	TRUB2	91	61.333	ENSSPUG00000015515	TRUB2	90	61.333	Sphenodon_punctatus
ENSCLAG00000001702	TRUB2	85	57.554	ENSSPAG00000017865	trub2	84	57.554	Stegastes_partitus
ENSCLAG00000001702	TRUB2	100	80.665	ENSSSCG00000005645	TRUB2	99	79.661	Sus_scrofa
ENSCLAG00000001702	TRUB2	80	66.284	ENSTGUG00000003704	TRUB2	99	66.284	Taeniopygia_guttata
ENSCLAG00000001702	TRUB2	97	46.073	ENSTRUG00000015499	trub2	86	52.500	Takifugu_rubripes
ENSCLAG00000001702	TRUB2	97	51.042	ENSTNIG00000014721	trub2	96	55.714	Tetraodon_nigroviridis
ENSCLAG00000001702	TRUB2	67	78.539	ENSTBEG00000000586	TRUB2	97	78.899	Tupaia_belangeri
ENSCLAG00000001702	TRUB2	99	77.538	ENSTTRG00000016486	TRUB2	98	77.778	Tursiops_truncatus
ENSCLAG00000001702	TRUB2	96	82.748	ENSUAMG00000020276	TRUB2	99	78.571	Ursus_americanus
ENSCLAG00000001702	TRUB2	96	82.748	ENSUMAG00000022051	TRUB2	99	78.571	Ursus_maritimus
ENSCLAG00000001702	TRUB2	91	72.316	ENSVPAG00000005793	TRUB2	99	65.176	Vicugna_pacos
ENSCLAG00000001702	TRUB2	95	81.029	ENSVVUG00000013451	TRUB2	89	81.029	Vulpes_vulpes
ENSCLAG00000001702	TRUB2	93	59.406	ENSXETG00000003973	trub2	93	59.406	Xenopus_tropicalis
ENSCLAG00000001702	TRUB2	87	54.118	ENSXCOG00000008759	trub2	83	55.036	Xiphophorus_couchianus
ENSCLAG00000001702	TRUB2	87	53.529	ENSXMAG00000015478	trub2	83	55.036	Xiphophorus_maculatus