EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000001857 (Gene tree)
Gene ID: 102010703
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 59816 bases
Position: chrJH721954.1:7248531-7308346
Accession: 102010703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002570	RRM_1	PF00076.22	7.3e-06	1	1
ENSCLAP00000002569	RRM_1	PF00076.22	8.9e-06	1	1
ENSCLAP00000002568	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002622	CNOT4-202	5146	-	ENSCLAP00000002569	639 (aa)	-	UPI00038F0AE0
ENSCLAT00000002623	CNOT4-203	1812	-	ENSCLAP00000002570	572 (aa)	-	UPI00038EB4A0
ENSCLAT00000002621	CNOT4-201	5359	XM_005405477	ENSCLAP00000002568	710 (aa)	XP_005405534	UPI00038EBD79

Gene Model

Click here to download ENSCLAG00000001857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001857	CNOT4	100	98.905	ENSG00000080802	CNOT4	100	98.905	Homo_sapiens
ENSCLAG00000001857	CNOT4	95	77.248	ENSAPOG00000016272	cnot4a	95	77.596	Acanthochromis_polyacanthus
ENSCLAG00000001857	CNOT4	97	97.536	ENSAMEG00000012081	CNOT4	89	99.535	Ailuropoda_melanoleuca
ENSCLAG00000001857	CNOT4	100	60.595	ENSACIG00000003011	cnot4a	100	60.099	Amphilophus_citrinellus
ENSCLAG00000001857	CNOT4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
ENSCLAG00000001857	CNOT4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
ENSCLAG00000001857	CNOT4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
ENSCLAG00000001857	CNOT4	100	88.189	ENSAPLG00000016441	CNOT4	100	88.189	Anas_platyrhynchos
ENSCLAG00000001857	CNOT4	100	87.795	ENSACAG00000011154	CNOT4	100	87.795	Anolis_carolinensis
ENSCLAG00000001857	CNOT4	100	98.905	ENSANAG00000032156	CNOT4	100	98.905	Aotus_nancymaae
ENSCLAG00000001857	CNOT4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
ENSCLAG00000001857	CNOT4	100	73.547	ENSAMXG00000001373	cnot4a	100	72.630	Astyanax_mexicanus
ENSCLAG00000001857	CNOT4	100	73.228	ENSAMXG00000011473	cnot4b	100	73.228	Astyanax_mexicanus
ENSCLAG00000001857	CNOT4	100	98.131	ENSBTAG00000017919	CNOT4	100	98.131	Bos_taurus
ENSCLAG00000001857	CNOT4	100	98.905	ENSCJAG00000012532	CNOT4	100	98.905	Callithrix_jacchus
ENSCLAG00000001857	CNOT4	100	99.126	ENSCAFG00000003223	CNOT4	100	99.126	Canis_familiaris
ENSCLAG00000001857	CNOT4	100	99.126	ENSCAFG00020000093	CNOT4	100	99.126	Canis_lupus_dingo
ENSCLAG00000001857	CNOT4	100	98.951	ENSCHIG00000010955	CNOT4	100	98.951	Capra_hircus
ENSCLAG00000001857	CNOT4	100	98.951	ENSTSYG00000000893	CNOT4	100	98.951	Carlito_syrichta
ENSCLAG00000001857	CNOT4	99	99.020	ENSCAPG00000006213	CNOT4	99	99.020	Cavia_aperea
ENSCLAG00000001857	CNOT4	100	99.577	ENSCPOG00000011526	CNOT4	100	99.577	Cavia_porcellus
ENSCLAG00000001857	CNOT4	100	98.287	ENSCCAG00000024414	CNOT4	100	98.287	Cebus_capucinus
ENSCLAG00000001857	CNOT4	100	98.287	ENSCATG00000022607	CNOT4	100	98.287	Cercocebus_atys
ENSCLAG00000001857	CNOT4	100	98.592	ENSCSAG00000009096	CNOT4	100	98.592	Chlorocebus_sabaeus
ENSCLAG00000001857	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSCLAG00000001857	CNOT4	100	95.091	ENSCPBG00000004959	CNOT4	100	95.091	Chrysemys_picta_bellii
ENSCLAG00000001857	CNOT4	66	69.323	ENSCING00000004364	-	66	69.323	Ciona_intestinalis
ENSCLAG00000001857	CNOT4	100	98.601	ENSCANG00000029319	CNOT4	100	98.601	Colobus_angolensis_palliatus
ENSCLAG00000001857	CNOT4	100	98.310	ENSCGRG00001014651	Cnot4	100	98.310	Cricetulus_griseus_chok1gshd
ENSCLAG00000001857	CNOT4	100	98.601	ENSCGRG00000005727	Cnot4	100	98.601	Cricetulus_griseus_crigri
ENSCLAG00000001857	CNOT4	94	90.566	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
ENSCLAG00000001857	CNOT4	99	90.566	ENSCVAG00000009399	cnot4a	91	90.566	Cyprinodon_variegatus
ENSCLAG00000001857	CNOT4	100	70.635	ENSDARG00000007045	cnot4a	100	70.130	Danio_rerio
ENSCLAG00000001857	CNOT4	100	92.620	ENSDARG00000007639	cnot4b	92	92.620	Danio_rerio
ENSCLAG00000001857	CNOT4	100	97.195	ENSDNOG00000009409	CNOT4	100	97.195	Dasypus_novemcinctus
ENSCLAG00000001857	CNOT4	100	98.261	ENSDORG00000012268	Cnot4	100	98.261	Dipodomys_ordii
ENSCLAG00000001857	CNOT4	100	91.725	ENSETEG00000013407	CNOT4	89	94.196	Echinops_telfairi
ENSCLAG00000001857	CNOT4	100	97.819	ENSEASG00005014430	CNOT4	100	97.819	Equus_asinus_asinus
ENSCLAG00000001857	CNOT4	100	97.819	ENSECAG00000020262	CNOT4	100	97.819	Equus_caballus
ENSCLAG00000001857	CNOT4	100	73.887	ENSELUG00000011540	cnot4b	97	72.113	Esox_lucius
ENSCLAG00000001857	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSCLAG00000001857	CNOT4	100	99.126	ENSFCAG00000011904	CNOT4	100	99.126	Felis_catus
ENSCLAG00000001857	CNOT4	100	88.583	ENSFALG00000011194	CNOT4	100	88.583	Ficedula_albicollis
ENSCLAG00000001857	CNOT4	100	98.310	ENSFDAG00000013525	CNOT4	100	98.310	Fukomys_damarensis
ENSCLAG00000001857	CNOT4	100	89.259	ENSFHEG00000006608	cnot4a	91	89.259	Fundulus_heteroclitus
ENSCLAG00000001857	CNOT4	95	59.647	ENSGMOG00000001329	cnot4a	97	60.618	Gadus_morhua
ENSCLAG00000001857	CNOT4	100	94.811	ENSGALG00000011682	CNOT4	100	94.811	Gallus_gallus
ENSCLAG00000001857	CNOT4	100	73.116	ENSGACG00000004276	cnot4a	100	71.102	Gasterosteus_aculeatus
ENSCLAG00000001857	CNOT4	100	94.811	ENSGAGG00000017331	CNOT4	100	94.811	Gopherus_agassizii
ENSCLAG00000001857	CNOT4	92	98.462	ENSGGOG00000000142	CNOT4	99	98.462	Gorilla_gorilla
ENSCLAG00000001857	CNOT4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
ENSCLAG00000001857	CNOT4	100	98.310	ENSHGLG00000011533	CNOT4	100	98.310	Heterocephalus_glaber_female
ENSCLAG00000001857	CNOT4	100	97.913	ENSHGLG00100013058	CNOT4	100	97.913	Heterocephalus_glaber_male
ENSCLAG00000001857	CNOT4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
ENSCLAG00000001857	CNOT4	100	84.718	ENSIPUG00000006393	cnot4	95	84.718	Ictalurus_punctatus
ENSCLAG00000001857	CNOT4	100	71.810	ENSIPUG00000016994	cnot4b	100	71.365	Ictalurus_punctatus
ENSCLAG00000001857	CNOT4	100	98.951	ENSSTOG00000007717	CNOT4	100	98.951	Ictidomys_tridecemlineatus
ENSCLAG00000001857	CNOT4	100	81.119	ENSJJAG00000019991	-	100	81.119	Jaculus_jaculus
ENSCLAG00000001857	CNOT4	100	98.776	ENSJJAG00000016618	Cnot4	100	98.776	Jaculus_jaculus
ENSCLAG00000001857	CNOT4	94	90.566	ENSKMAG00000004581	cnot4a	100	73.282	Kryptolebias_marmoratus
ENSCLAG00000001857	CNOT4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
ENSCLAG00000001857	CNOT4	100	83.838	ENSLACG00000002647	CNOT4	99	83.838	Latimeria_chalumnae
ENSCLAG00000001857	CNOT4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
ENSCLAG00000001857	CNOT4	100	96.353	ENSLAFG00000000709	CNOT4	100	96.353	Loxodonta_africana
ENSCLAG00000001857	CNOT4	100	98.776	ENSMFAG00000046349	CNOT4	100	98.776	Macaca_fascicularis
ENSCLAG00000001857	CNOT4	100	98.287	ENSMMUG00000016181	CNOT4	100	98.287	Macaca_mulatta
ENSCLAG00000001857	CNOT4	100	98.905	ENSMNEG00000042164	CNOT4	100	98.905	Macaca_nemestrina
ENSCLAG00000001857	CNOT4	100	98.776	ENSMLEG00000032709	CNOT4	100	98.776	Mandrillus_leucophaeus
ENSCLAG00000001857	CNOT4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
ENSCLAG00000001857	CNOT4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
ENSCLAG00000001857	CNOT4	100	88.320	ENSMGAG00000011788	CNOT4	100	88.320	Meleagris_gallopavo
ENSCLAG00000001857	CNOT4	100	98.028	ENSMAUG00000020415	Cnot4	100	98.028	Mesocricetus_auratus
ENSCLAG00000001857	CNOT4	100	98.598	ENSMICG00000001667	CNOT4	100	98.598	Microcebus_murinus
ENSCLAG00000001857	CNOT4	100	98.028	ENSMOCG00000020955	Cnot4	100	98.028	Microtus_ochrogaster
ENSCLAG00000001857	CNOT4	94	76.374	ENSMMOG00000014565	cnot4a	97	75.585	Mola_mola
ENSCLAG00000001857	CNOT4	100	96.479	ENSMODG00000014068	CNOT4	100	96.479	Monodelphis_domestica
ENSCLAG00000001857	CNOT4	93	90.566	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
ENSCLAG00000001857	CNOT4	100	98.258	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.258	Mus_caroli
ENSCLAG00000001857	CNOT4	100	98.427	ENSMUSG00000038784	Cnot4	100	98.427	Mus_musculus
ENSCLAG00000001857	CNOT4	100	98.427	MGP_PahariEiJ_G0021974	Cnot4	100	98.427	Mus_pahari
ENSCLAG00000001857	CNOT4	100	98.077	MGP_SPRETEiJ_G0029216	Cnot4	100	98.077	Mus_spretus
ENSCLAG00000001857	CNOT4	100	98.592	ENSMPUG00000004089	CNOT4	100	98.592	Mustela_putorius_furo
ENSCLAG00000001857	CNOT4	100	98.131	ENSMLUG00000008260	CNOT4	100	98.131	Myotis_lucifugus
ENSCLAG00000001857	CNOT4	100	98.028	ENSNGAG00000015030	Cnot4	100	98.028	Nannospalax_galili
ENSCLAG00000001857	CNOT4	100	71.903	ENSNBRG00000021144	cnot4a	100	71.752	Neolamprologus_brichardi
ENSCLAG00000001857	CNOT4	100	97.975	ENSNLEG00000013352	CNOT4	99	99.020	Nomascus_leucogenys
ENSCLAG00000001857	CNOT4	88	96.725	ENSOPRG00000001023	CNOT4	82	96.725	Ochotona_princeps
ENSCLAG00000001857	CNOT4	100	99.577	ENSODEG00000012975	CNOT4	100	99.577	Octodon_degus
ENSCLAG00000001857	CNOT4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
ENSCLAG00000001857	CNOT4	100	95.365	ENSOANG00000005006	CNOT4	100	95.365	Ornithorhynchus_anatinus
ENSCLAG00000001857	CNOT4	100	98.451	ENSOCUG00000013448	CNOT4	100	98.451	Oryctolagus_cuniculus
ENSCLAG00000001857	CNOT4	100	73.313	ENSORLG00000003727	cnot4a	91	90.943	Oryzias_latipes
ENSCLAG00000001857	CNOT4	100	73.030	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
ENSCLAG00000001857	CNOT4	100	73.466	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
ENSCLAG00000001857	CNOT4	100	72.546	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
ENSCLAG00000001857	CNOT4	100	98.177	ENSOGAG00000015499	CNOT4	100	98.177	Otolemur_garnettii
ENSCLAG00000001857	CNOT4	100	97.756	ENSOARG00000008803	CNOT4	100	97.756	Ovis_aries
ENSCLAG00000001857	CNOT4	100	97.975	ENSPPAG00000041937	CNOT4	100	97.975	Pan_paniscus
ENSCLAG00000001857	CNOT4	100	98.442	ENSPPRG00000023940	CNOT4	100	98.442	Panthera_pardus
ENSCLAG00000001857	CNOT4	100	99.126	ENSPTIG00000016601	CNOT4	100	99.126	Panthera_tigris_altaica
ENSCLAG00000001857	CNOT4	100	98.131	ENSPTRG00000019727	CNOT4	100	98.131	Pan_troglodytes
ENSCLAG00000001857	CNOT4	100	98.131	ENSPANG00000017724	CNOT4	100	98.131	Papio_anubis
ENSCLAG00000001857	CNOT4	100	72.784	ENSPKIG00000018137	cnot4a	100	72.473	Paramormyrops_kingsleyae
ENSCLAG00000001857	CNOT4	100	86.501	ENSPSIG00000011256	CNOT4	99	93.137	Pelodiscus_sinensis
ENSCLAG00000001857	CNOT4	100	73.676	ENSPMGG00000005671	cnot4a	100	73.525	Periophthalmus_magnuspinnatus
ENSCLAG00000001857	CNOT4	100	98.169	ENSPEMG00000021566	Cnot4	100	98.169	Peromyscus_maniculatus_bairdii
ENSCLAG00000001857	CNOT4	100	96.714	ENSPCIG00000029622	CNOT4	96	96.056	Phascolarctos_cinereus
ENSCLAG00000001857	CNOT4	63	90.566	ENSPFOG00000002228	cnot4a	51	90.566	Poecilia_formosa
ENSCLAG00000001857	CNOT4	100	73.668	ENSPLAG00000001780	cnot4a	100	73.059	Poecilia_latipinna
ENSCLAG00000001857	CNOT4	100	73.668	ENSPMEG00000006852	cnot4a	100	73.059	Poecilia_mexicana
ENSCLAG00000001857	CNOT4	100	71.380	ENSPREG00000008171	cnot4a	100	70.281	Poecilia_reticulata
ENSCLAG00000001857	CNOT4	100	98.310	ENSPPYG00000018026	CNOT4	100	98.310	Pongo_abelii
ENSCLAG00000001857	CNOT4	100	99.126	ENSPCOG00000019907	CNOT4	100	99.126	Propithecus_coquereli
ENSCLAG00000001857	CNOT4	97	96.087	ENSPVAG00000004905	CNOT4	90	96.087	Pteropus_vampyrus
ENSCLAG00000001857	CNOT4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
ENSCLAG00000001857	CNOT4	100	93.727	ENSPNAG00000008679	cnot4b	100	75.486	Pygocentrus_nattereri
ENSCLAG00000001857	CNOT4	100	73.739	ENSPNAG00000020433	cnot4a	100	72.131	Pygocentrus_nattereri
ENSCLAG00000001857	CNOT4	100	97.324	ENSRNOG00000010795	Cnot4	100	97.324	Rattus_norvegicus
ENSCLAG00000001857	CNOT4	100	98.287	ENSRBIG00000043977	CNOT4	100	98.287	Rhinopithecus_bieti
ENSCLAG00000001857	CNOT4	100	98.951	ENSSBOG00000020808	CNOT4	100	98.951	Saimiri_boliviensis_boliviensis
ENSCLAG00000001857	CNOT4	100	96.338	ENSSHAG00000013639	CNOT4	100	96.338	Sarcophilus_harrisii
ENSCLAG00000001857	CNOT4	100	74.495	ENSSFOG00015002019	cnot4a	100	74.339	Scleropages_formosus
ENSCLAG00000001857	CNOT4	100	81.905	ENSSFOG00015017285	CNOT4	100	79.225	Scleropages_formosus
ENSCLAG00000001857	CNOT4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
ENSCLAG00000001857	CNOT4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
ENSCLAG00000001857	CNOT4	100	72.068	ENSSDUG00000018585	cnot4b	100	72.068	Seriola_dumerili
ENSCLAG00000001857	CNOT4	100	63.725	ENSSLDG00000014347	cnot4b	91	70.330	Seriola_lalandi_dorsalis
ENSCLAG00000001857	CNOT4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
ENSCLAG00000001857	CNOT4	100	95.171	ENSSPUG00000004677	CNOT4	100	95.171	Sphenodon_punctatus
ENSCLAG00000001857	CNOT4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
ENSCLAG00000001857	CNOT4	100	98.951	ENSSSCG00000021354	CNOT4	100	98.951	Sus_scrofa
ENSCLAG00000001857	CNOT4	100	88.714	ENSTGUG00000009161	CNOT4	100	88.714	Taeniopygia_guttata
ENSCLAG00000001857	CNOT4	100	82.508	ENSTRUG00000016861	cnot4a	100	72.508	Takifugu_rubripes
ENSCLAG00000001857	CNOT4	100	70.205	ENSTNIG00000016000	cnot4a	100	69.377	Tetraodon_nigroviridis
ENSCLAG00000001857	CNOT4	94	95.941	ENSTBEG00000002202	CNOT4	86	92.560	Tupaia_belangeri
ENSCLAG00000001857	CNOT4	97	97.250	ENSTTRG00000005122	CNOT4	90	97.250	Tursiops_truncatus
ENSCLAG00000001857	CNOT4	100	98.442	ENSUAMG00000026759	CNOT4	100	98.442	Ursus_americanus
ENSCLAG00000001857	CNOT4	100	98.435	ENSUMAG00000015351	CNOT4	100	98.435	Ursus_maritimus
ENSCLAG00000001857	CNOT4	100	99.061	ENSVVUG00000006200	CNOT4	100	99.061	Vulpes_vulpes
ENSCLAG00000001857	CNOT4	100	98.519	ENSXETG00000010594	cnot4	92	98.519	Xenopus_tropicalis
ENSCLAG00000001857	CNOT4	94	72.426	ENSXCOG00000020824	cnot4a	98	71.210	Xiphophorus_couchianus
ENSCLAG00000001857	CNOT4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus