EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001904 (Gene tree)
Gene ID: 102022623
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 25208 bases
Position: chrJH721963.1:6949823-6975030
Accession: 102022623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002638	RRM_1	PF00076.22	1.4e-25	1	1
ENSCLAP00000002637	RRM_1	PF00076.22	1.5e-25	1	1
ENSCLAP00000002639	RRM_1	PF00076.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002693	CSTF2-203	2284	-	ENSCLAP00000002639	183 (aa)	-	-
ENSCLAT00000002692	CSTF2-202	6131	XM_005406941	ENSCLAP00000002638	577 (aa)	XP_005406998	UPI00038ED330
ENSCLAT00000002691	CSTF2-201	6191	XM_005406940	ENSCLAP00000002637	597 (aa)	XP_005406997	UPI00038EBBBF

Gene Model

Click here to download ENSCLAG00000001904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001904	CSTF2	89	86.503	ENSCLAG00000017916	CSTF2T	99	66.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001904	CSTF2	100	95.980	ENSG00000101811	CSTF2	100	95.980	Homo_sapiens
ENSCLAG00000001904	CSTF2	85	91.667	ENSAPOG00000005630	cstf2	97	60.068	Acanthochromis_polyacanthus
ENSCLAG00000001904	CSTF2	100	94.371	ENSAMEG00000002082	CSTF2	100	94.371	Ailuropoda_melanoleuca
ENSCLAG00000001904	CSTF2	85	91.026	ENSACIG00000012852	cstf2	96	58.419	Amphilophus_citrinellus
ENSCLAG00000001904	CSTF2	85	91.667	ENSAOCG00000020905	cstf2	97	60.204	Amphiprion_ocellaris
ENSCLAG00000001904	CSTF2	85	91.667	ENSAPEG00000006526	cstf2	97	60.204	Amphiprion_percula
ENSCLAG00000001904	CSTF2	85	91.026	ENSATEG00000018186	cstf2	96	60.069	Anabas_testudineus
ENSCLAG00000001904	CSTF2	87	91.875	ENSAPLG00000007255	CSTF2	98	77.983	Anas_platyrhynchos
ENSCLAG00000001904	CSTF2	100	94.975	ENSANAG00000022342	CSTF2	100	94.975	Aotus_nancymaae
ENSCLAG00000001904	CSTF2	85	91.667	ENSACLG00000000779	cstf2	93	60.959	Astatotilapia_calliptera
ENSCLAG00000001904	CSTF2	85	89.744	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSCLAG00000001904	CSTF2	100	93.241	ENSBTAG00000003547	CSTF2	100	93.241	Bos_taurus
ENSCLAG00000001904	CSTF2	100	95.310	ENSCJAG00000004422	CSTF2	100	95.310	Callithrix_jacchus
ENSCLAG00000001904	CSTF2	100	94.627	ENSCAFG00000017551	CSTF2	100	94.627	Canis_familiaris
ENSCLAG00000001904	CSTF2	100	94.807	ENSCAFG00020007619	CSTF2	100	94.807	Canis_lupus_dingo
ENSCLAG00000001904	CSTF2	100	93.588	ENSCHIG00000016994	CSTF2	100	93.588	Capra_hircus
ENSCLAG00000001904	CSTF2	100	96.650	ENSTSYG00000006529	CSTF2	100	96.650	Carlito_syrichta
ENSCLAG00000001904	CSTF2	100	97.655	ENSCPOG00000015255	CSTF2	100	97.655	Cavia_porcellus
ENSCLAG00000001904	CSTF2	100	95.310	ENSCCAG00000032975	CSTF2	100	95.310	Cebus_capucinus
ENSCLAG00000001904	CSTF2	100	95.980	ENSCATG00000022835	CSTF2	100	95.980	Cercocebus_atys
ENSCLAG00000001904	CSTF2	100	95.980	ENSCSAG00000010360	CSTF2	100	95.980	Chlorocebus_sabaeus
ENSCLAG00000001904	CSTF2	76	97.122	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSCLAG00000001904	CSTF2	87	92.500	ENSCPBG00000014293	CSTF2	100	75.963	Chrysemys_picta_bellii
ENSCLAG00000001904	CSTF2	100	95.980	ENSCANG00000030612	CSTF2	100	95.980	Colobus_angolensis_palliatus
ENSCLAG00000001904	CSTF2	100	91.207	ENSCGRG00001023023	Cstf2	100	91.207	Cricetulus_griseus_chok1gshd
ENSCLAG00000001904	CSTF2	100	88.103	ENSCGRG00000003897	Cstf2	100	88.103	Cricetulus_griseus_crigri
ENSCLAG00000001904	CSTF2	85	91.667	ENSCVAG00000005731	cstf2	96	61.658	Cyprinodon_variegatus
ENSCLAG00000001904	CSTF2	87	88.679	ENSDARG00000090788	cstf2	94	92.188	Danio_rerio
ENSCLAG00000001904	CSTF2	100	92.896	ENSDORG00000007195	Cstf2	100	92.896	Dipodomys_ordii
ENSCLAG00000001904	CSTF2	87	97.500	ENSETEG00000004931	CSTF2	66	98.333	Echinops_telfairi
ENSCLAG00000001904	CSTF2	100	94.640	ENSEASG00005001216	CSTF2	100	94.640	Equus_asinus_asinus
ENSCLAG00000001904	CSTF2	100	94.640	ENSECAG00000009325	CSTF2	100	94.640	Equus_caballus
ENSCLAG00000001904	CSTF2	100	95.310	ENSFCAG00000007000	CSTF2	100	95.310	Felis_catus
ENSCLAG00000001904	CSTF2	85	94.194	ENSFALG00000003859	CSTF2	100	77.482	Ficedula_albicollis
ENSCLAG00000001904	CSTF2	100	97.747	ENSFDAG00000002416	CSTF2	100	97.747	Fukomys_damarensis
ENSCLAG00000001904	CSTF2	85	91.026	ENSFHEG00000017065	cstf2	93	61.485	Fundulus_heteroclitus
ENSCLAG00000001904	CSTF2	87	84.906	ENSGMOG00000005145	cstf2	99	56.799	Gadus_morhua
ENSCLAG00000001904	CSTF2	87	91.875	ENSGALG00000006760	CSTF2	100	85.333	Gallus_gallus
ENSCLAG00000001904	CSTF2	85	90.385	ENSGAFG00000020027	cstf2	96	59.450	Gambusia_affinis
ENSCLAG00000001904	CSTF2	85	86.792	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSCLAG00000001904	CSTF2	87	92.500	ENSGAGG00000006037	CSTF2	100	78.041	Gopherus_agassizii
ENSCLAG00000001904	CSTF2	100	95.980	ENSGGOG00000022267	CSTF2	100	95.980	Gorilla_gorilla
ENSCLAG00000001904	CSTF2	85	91.667	ENSHBUG00000016183	cstf2	93	60.549	Haplochromis_burtoni
ENSCLAG00000001904	CSTF2	100	82.842	ENSHGLG00000013455	-	100	82.842	Heterocephalus_glaber_female
ENSCLAG00000001904	CSTF2	100	97.920	ENSHGLG00000000659	-	100	97.920	Heterocephalus_glaber_female
ENSCLAG00000001904	CSTF2	100	97.920	ENSHGLG00100001130	-	100	97.920	Heterocephalus_glaber_male
ENSCLAG00000001904	CSTF2	100	83.016	ENSHGLG00100015391	-	100	83.016	Heterocephalus_glaber_male
ENSCLAG00000001904	CSTF2	84	90.909	ENSHCOG00000005157	cstf2	97	60.554	Hippocampus_comes
ENSCLAG00000001904	CSTF2	87	88.679	ENSIPUG00000017839	cstf2	99	61.412	Ictalurus_punctatus
ENSCLAG00000001904	CSTF2	100	96.175	ENSSTOG00000023445	CSTF2	100	96.175	Ictidomys_tridecemlineatus
ENSCLAG00000001904	CSTF2	100	93.989	ENSJJAG00000020507	Cstf2	100	93.989	Jaculus_jaculus
ENSCLAG00000001904	CSTF2	85	90.385	ENSKMAG00000001068	cstf2	96	59.028	Kryptolebias_marmoratus
ENSCLAG00000001904	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	85	94.915	Labrus_bergylta
ENSCLAG00000001904	CSTF2	87	90.000	ENSLACG00000015927	CSTF2	99	68.085	Latimeria_chalumnae
ENSCLAG00000001904	CSTF2	98	79.167	ENSLOCG00000015300	cstf2	81	88.136	Lepisosteus_oculatus
ENSCLAG00000001904	CSTF2	100	91.122	ENSLAFG00000000474	CSTF2	100	91.122	Loxodonta_africana
ENSCLAG00000001904	CSTF2	100	95.980	ENSMFAG00000043888	CSTF2	100	95.980	Macaca_fascicularis
ENSCLAG00000001904	CSTF2	100	95.142	ENSMMUG00000013008	CSTF2	100	95.142	Macaca_mulatta
ENSCLAG00000001904	CSTF2	100	95.980	ENSMNEG00000041824	CSTF2	100	95.980	Macaca_nemestrina
ENSCLAG00000001904	CSTF2	100	95.980	ENSMLEG00000036870	CSTF2	100	95.980	Mandrillus_leucophaeus
ENSCLAG00000001904	CSTF2	85	90.385	ENSMAMG00000020364	cstf2	96	59.266	Mastacembelus_armatus
ENSCLAG00000001904	CSTF2	85	91.667	ENSMZEG00005007200	cstf2	96	60.959	Maylandia_zebra
ENSCLAG00000001904	CSTF2	85	94.194	ENSMGAG00000004139	CSTF2	100	84.462	Meleagris_gallopavo
ENSCLAG00000001904	CSTF2	100	91.552	ENSMAUG00000000965	Cstf2	100	91.552	Mesocricetus_auratus
ENSCLAG00000001904	CSTF2	100	95.645	ENSMICG00000014121	CSTF2	100	95.645	Microcebus_murinus
ENSCLAG00000001904	CSTF2	100	90.172	ENSMOCG00000008081	Cstf2	100	90.172	Microtus_ochrogaster
ENSCLAG00000001904	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	96	54.217	Mola_mola
ENSCLAG00000001904	CSTF2	87	93.750	ENSMODG00000011785	CSTF2	100	81.518	Monodelphis_domestica
ENSCLAG00000001904	CSTF2	100	91.552	MGP_CAROLIEiJ_G0033383	Cstf2	100	91.552	Mus_caroli
ENSCLAG00000001904	CSTF2	100	91.552	ENSMUSG00000031256	Cstf2	100	91.552	Mus_musculus
ENSCLAG00000001904	CSTF2	100	91.537	MGP_PahariEiJ_G0031923	Cstf2	100	91.710	Mus_pahari
ENSCLAG00000001904	CSTF2	100	91.552	MGP_SPRETEiJ_G0034548	Cstf2	100	91.552	Mus_spretus
ENSCLAG00000001904	CSTF2	100	89.841	ENSMPUG00000002339	CSTF2	100	89.841	Mustela_putorius_furo
ENSCLAG00000001904	CSTF2	100	88.553	ENSMLUG00000004598	CSTF2	98	88.553	Myotis_lucifugus
ENSCLAG00000001904	CSTF2	100	93.092	ENSNGAG00000021985	Cstf2	100	93.264	Nannospalax_galili
ENSCLAG00000001904	CSTF2	83	93.377	ENSNBRG00000021694	cstf2	100	55.950	Neolamprologus_brichardi
ENSCLAG00000001904	CSTF2	100	96.147	ENSNLEG00000007510	CSTF2	100	96.147	Nomascus_leucogenys
ENSCLAG00000001904	CSTF2	87	91.250	ENSMEUG00000007875	-	100	78.683	Notamacropus_eugenii
ENSCLAG00000001904	CSTF2	81	95.302	ENSMEUG00000014025	-	100	80.418	Notamacropus_eugenii
ENSCLAG00000001904	CSTF2	100	81.629	ENSMEUG00000011186	-	100	83.536	Notamacropus_eugenii
ENSCLAG00000001904	CSTF2	84	100.000	ENSOPRG00000003106	CSTF2	89	80.769	Ochotona_princeps
ENSCLAG00000001904	CSTF2	100	97.920	ENSODEG00000002059	CSTF2	100	97.920	Octodon_degus
ENSCLAG00000001904	CSTF2	85	91.026	ENSONIG00000002631	cstf2	99	57.566	Oreochromis_niloticus
ENSCLAG00000001904	CSTF2	97	98.214	ENSOANG00000004208	CSTF2	86	98.305	Ornithorhynchus_anatinus
ENSCLAG00000001904	CSTF2	100	93.414	ENSOCUG00000010468	CSTF2	100	93.414	Oryctolagus_cuniculus
ENSCLAG00000001904	CSTF2	85	90.385	ENSORLG00000001380	cstf2	97	58.020	Oryzias_latipes
ENSCLAG00000001904	CSTF2	85	90.385	ENSORLG00020021917	cstf2	97	58.191	Oryzias_latipes_hni
ENSCLAG00000001904	CSTF2	85	90.385	ENSORLG00015011996	cstf2	97	58.020	Oryzias_latipes_hsok
ENSCLAG00000001904	CSTF2	85	91.026	ENSOMEG00000015507	cstf2	97	59.725	Oryzias_melastigma
ENSCLAG00000001904	CSTF2	100	89.825	ENSOGAG00000011192	CSTF2	100	89.825	Otolemur_garnettii
ENSCLAG00000001904	CSTF2	100	93.588	ENSOARG00000001022	CSTF2	100	93.588	Ovis_aries
ENSCLAG00000001904	CSTF2	100	95.980	ENSPPAG00000031804	CSTF2	100	95.980	Pan_paniscus
ENSCLAG00000001904	CSTF2	100	95.477	ENSPPRG00000022492	CSTF2	100	95.477	Panthera_pardus
ENSCLAG00000001904	CSTF2	100	95.142	ENSPTIG00000009922	CSTF2	100	95.142	Panthera_tigris_altaica
ENSCLAG00000001904	CSTF2	100	95.980	ENSPTRG00000022090	CSTF2	100	95.980	Pan_troglodytes
ENSCLAG00000001904	CSTF2	100	95.980	ENSPANG00000002303	CSTF2	100	95.980	Papio_anubis
ENSCLAG00000001904	CSTF2	85	91.667	ENSPKIG00000005033	cstf2	97	60.727	Paramormyrops_kingsleyae
ENSCLAG00000001904	CSTF2	85	91.026	ENSPMGG00000006534	cstf2	97	59.725	Periophthalmus_magnuspinnatus
ENSCLAG00000001904	CSTF2	100	90.690	ENSPEMG00000019415	Cstf2	100	90.690	Peromyscus_maniculatus_bairdii
ENSCLAG00000001904	CSTF2	87	93.750	ENSPCIG00000002989	CSTF2	100	82.266	Phascolarctos_cinereus
ENSCLAG00000001904	CSTF2	85	91.026	ENSPLAG00000011176	cstf2	96	57.095	Poecilia_latipinna
ENSCLAG00000001904	CSTF2	85	91.026	ENSPMEG00000017743	cstf2	96	57.095	Poecilia_mexicana
ENSCLAG00000001904	CSTF2	85	91.026	ENSPREG00000011481	cstf2	97	60.410	Poecilia_reticulata
ENSCLAG00000001904	CSTF2	100	96.147	ENSPPYG00000020541	CSTF2	100	96.147	Pongo_abelii
ENSCLAG00000001904	CSTF2	100	95.645	ENSPCOG00000027744	CSTF2	100	95.645	Propithecus_coquereli
ENSCLAG00000001904	CSTF2	97	80.431	ENSPVAG00000008342	CSTF2	100	80.431	Pteropus_vampyrus
ENSCLAG00000001904	CSTF2	85	91.667	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSCLAG00000001904	CSTF2	85	89.744	ENSPNAG00000018887	cstf2	97	61.538	Pygocentrus_nattereri
ENSCLAG00000001904	CSTF2	100	91.207	ENSRNOG00000048025	Cstf2	100	91.207	Rattus_norvegicus
ENSCLAG00000001904	CSTF2	100	94.281	ENSRBIG00000030745	CSTF2	100	94.281	Rhinopithecus_bieti
ENSCLAG00000001904	CSTF2	100	95.980	ENSRROG00000045042	CSTF2	100	95.980	Rhinopithecus_roxellana
ENSCLAG00000001904	CSTF2	100	95.142	ENSSBOG00000021649	CSTF2	100	95.142	Saimiri_boliviensis_boliviensis
ENSCLAG00000001904	CSTF2	87	93.750	ENSSHAG00000003681	CSTF2	92	82.444	Sarcophilus_harrisii
ENSCLAG00000001904	CSTF2	85	91.026	ENSSFOG00015006348	cstf2	98	63.366	Scleropages_formosus
ENSCLAG00000001904	CSTF2	87	91.195	ENSSMAG00000013463	cstf2	96	60.801	Scophthalmus_maximus
ENSCLAG00000001904	CSTF2	87	91.875	ENSSPUG00000005288	-	98	79.661	Sphenodon_punctatus
ENSCLAG00000001904	CSTF2	100	93.970	ENSSSCG00000012486	CSTF2	100	94.276	Sus_scrofa
ENSCLAG00000001904	CSTF2	100	79.082	ENSTGUG00000002253	CSTF2	100	79.422	Taeniopygia_guttata
ENSCLAG00000001904	CSTF2	85	89.103	ENSTNIG00000016860	cstf2	99	59.222	Tetraodon_nigroviridis
ENSCLAG00000001904	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSCLAG00000001904	CSTF2	100	94.974	ENSTTRG00000013556	CSTF2	100	94.974	Tursiops_truncatus
ENSCLAG00000001904	CSTF2	100	94.850	ENSUAMG00000026605	CSTF2	100	94.850	Ursus_americanus
ENSCLAG00000001904	CSTF2	100	88.107	ENSUMAG00000012417	CSTF2	100	95.502	Ursus_maritimus
ENSCLAG00000001904	CSTF2	87	97.500	ENSVPAG00000006466	CSTF2	69	93.878	Vicugna_pacos
ENSCLAG00000001904	CSTF2	100	94.801	ENSVVUG00000004717	CSTF2	100	94.801	Vulpes_vulpes
ENSCLAG00000001904	CSTF2	87	90.625	ENSXETG00000009642	cstf2	87	93.333	Xenopus_tropicalis
ENSCLAG00000001904	CSTF2	80	91.837	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSCLAG00000001904	CSTF2	85	90.385	ENSXMAG00000013524	cstf2	96	59.828	Xiphophorus_maculatus