EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001934 (Gene tree)
Gene ID: 102009065
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 11209 bases
Position: chrJH721949.1:7560684-7571892
Accession: 102009065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002682	zf-C2H2	PF00096.26	1.3e-14	1	4
ENSCLAP00000002682	zf-C2H2	PF00096.26	1.3e-14	2	4
ENSCLAP00000002682	zf-C2H2	PF00096.26	1.3e-14	3	4
ENSCLAP00000002682	zf-C2H2	PF00096.26	1.3e-14	4	4
ENSCLAP00000002681	zf-C2H2	PF00096.26	7.8e-14	1	4
ENSCLAP00000002681	zf-C2H2	PF00096.26	7.8e-14	2	4
ENSCLAP00000002681	zf-C2H2	PF00096.26	7.8e-14	3	4
ENSCLAP00000002681	zf-C2H2	PF00096.26	7.8e-14	4	4
ENSCLAP00000002681	zf-met	PF12874.7	0.00038	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002736	ZIC3-201	2142	XM_005404576	ENSCLAP00000002681	456 (aa)	XP_005404633	UPI00038EA64D
ENSCLAT00000002737	ZIC3-202	4069	XM_005404575	ENSCLAP00000002682	466 (aa)	XP_005404632	UPI00038EA288

Gene Model

Click here to download ENSCLAG00000001934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001934	ZIC3	56	46.296	ENSCLAG00000004223	ZFP1	82	46.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001934	ZIC3	100	98.501	ENSG00000156925	ZIC3	100	98.501	Homo_sapiens
ENSCLAG00000001934	ZIC3	100	98.715	ENSANAG00000019614	ZIC3	100	98.715	Aotus_nancymaae
ENSCLAG00000001934	ZIC3	100	98.287	ENSCJAG00000013792	ZIC3	100	98.287	Callithrix_jacchus
ENSCLAG00000001934	ZIC3	100	98.501	ENSCAFG00000018979	ZIC3	100	98.501	Canis_familiaris
ENSCLAG00000001934	ZIC3	100	95.717	ENSTSYG00000003356	ZIC3	100	95.717	Carlito_syrichta
ENSCLAG00000001934	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSCLAG00000001934	ZIC3	100	98.501	ENSCCAG00000025983	ZIC3	100	98.501	Cebus_capucinus
ENSCLAG00000001934	ZIC3	100	98.501	ENSCATG00000036569	ZIC3	100	98.501	Cercocebus_atys
ENSCLAG00000001934	ZIC3	93	86.468	ENSCPBG00000026115	ZIC3	100	86.468	Chrysemys_picta_bellii
ENSCLAG00000001934	ZIC3	100	98.501	ENSCANG00000017505	ZIC3	100	98.501	Colobus_angolensis_palliatus
ENSCLAG00000001934	ZIC3	100	98.927	ENSCGRG00001024527	Zic3	100	98.927	Cricetulus_griseus_chok1gshd
ENSCLAG00000001934	ZIC3	100	98.712	ENSDORG00000025481	Zic3	100	98.712	Dipodomys_ordii
ENSCLAG00000001934	ZIC3	100	98.501	ENSFCAG00000025684	ZIC3	100	98.501	Felis_catus
ENSCLAG00000001934	ZIC3	80	99.191	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSCLAG00000001934	ZIC3	94	81.093	ENSGAGG00000004149	ZIC3	92	81.093	Gopherus_agassizii
ENSCLAG00000001934	ZIC3	100	98.501	ENSGGOG00000011914	ZIC3	100	98.501	Gorilla_gorilla
ENSCLAG00000001934	ZIC3	100	98.283	ENSHGLG00000006298	ZIC3	100	98.283	Heterocephalus_glaber_female
ENSCLAG00000001934	ZIC3	67	69.737	ENSHGLG00100002829	ZIC3	100	77.389	Heterocephalus_glaber_male
ENSCLAG00000001934	ZIC3	100	99.356	ENSJJAG00000022714	Zic3	100	99.356	Jaculus_jaculus
ENSCLAG00000001934	ZIC3	100	76.445	ENSLACG00000014597	ZIC3	100	76.445	Latimeria_chalumnae
ENSCLAG00000001934	ZIC3	88	94.161	ENSLAFG00000007048	ZIC3	100	93.216	Loxodonta_africana
ENSCLAG00000001934	ZIC3	100	98.501	ENSMFAG00000027018	ZIC3	100	98.501	Macaca_fascicularis
ENSCLAG00000001934	ZIC3	100	98.249	ENSMMUG00000002023	ZIC3	100	98.249	Macaca_mulatta
ENSCLAG00000001934	ZIC3	100	98.501	ENSMNEG00000040682	ZIC3	100	98.501	Macaca_nemestrina
ENSCLAG00000001934	ZIC3	100	98.501	ENSMLEG00000004378	ZIC3	100	98.501	Mandrillus_leucophaeus
ENSCLAG00000001934	ZIC3	100	98.712	ENSMAUG00000009402	Zic3	100	98.712	Mesocricetus_auratus
ENSCLAG00000001934	ZIC3	100	98.715	ENSMICG00000042529	ZIC3	100	98.715	Microcebus_murinus
ENSCLAG00000001934	ZIC3	100	98.498	ENSMOCG00000020544	Zic3	100	98.498	Microtus_ochrogaster
ENSCLAG00000001934	ZIC3	100	98.498	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSCLAG00000001934	ZIC3	100	98.498	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSCLAG00000001934	ZIC3	100	98.498	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSCLAG00000001934	ZIC3	100	98.498	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSCLAG00000001934	ZIC3	100	98.283	ENSNGAG00000023346	Zic3	100	98.283	Nannospalax_galili
ENSCLAG00000001934	ZIC3	79	98.577	ENSNLEG00000003005	-	100	98.577	Nomascus_leucogenys
ENSCLAG00000001934	ZIC3	100	99.785	ENSODEG00000005556	ZIC3	100	99.785	Octodon_degus
ENSCLAG00000001934	ZIC3	100	98.501	ENSPPAG00000030013	ZIC3	100	98.501	Pan_paniscus
ENSCLAG00000001934	ZIC3	100	98.501	ENSPPRG00000010839	ZIC3	100	98.501	Panthera_pardus
ENSCLAG00000001934	ZIC3	100	98.501	ENSPTRG00000043849	ZIC3	100	98.501	Pan_troglodytes
ENSCLAG00000001934	ZIC3	100	98.501	ENSPANG00000011357	ZIC3	100	98.501	Papio_anubis
ENSCLAG00000001934	ZIC3	100	73.504	ENSPKIG00000017705	zic3	100	73.504	Paramormyrops_kingsleyae
ENSCLAG00000001934	ZIC3	62	90.068	ENSPSIG00000011896	ZIC3	99	90.068	Pelodiscus_sinensis
ENSCLAG00000001934	ZIC3	100	98.712	ENSPEMG00000022168	Zic3	100	98.712	Peromyscus_maniculatus_bairdii
ENSCLAG00000001934	ZIC3	100	98.287	ENSPCOG00000021557	ZIC3	100	98.287	Propithecus_coquereli
ENSCLAG00000001934	ZIC3	100	98.069	ENSRNOG00000000861	Zic3	100	98.069	Rattus_norvegicus
ENSCLAG00000001934	ZIC3	100	98.501	ENSRBIG00000030660	ZIC3	100	98.501	Rhinopithecus_bieti
ENSCLAG00000001934	ZIC3	100	98.501	ENSRROG00000028410	ZIC3	100	98.501	Rhinopithecus_roxellana
ENSCLAG00000001934	ZIC3	100	98.501	ENSSBOG00000024684	ZIC3	100	98.501	Saimiri_boliviensis_boliviensis
ENSCLAG00000001934	ZIC3	99	74.678	ENSSFOG00015011731	zic3	100	74.678	Scleropages_formosus
ENSCLAG00000001934	ZIC3	99	68.884	ENSSFOG00015008079	zic3	100	68.884	Scleropages_formosus
ENSCLAG00000001934	ZIC3	83	83.503	ENSTGUG00000002155	ZIC3	100	83.503	Taeniopygia_guttata
ENSCLAG00000001934	ZIC3	100	98.501	ENSVVUG00000021378	ZIC3	100	98.501	Vulpes_vulpes
ENSCLAG00000001934	ZIC3	100	76.759	ENSXETG00000024458	zic3	100	76.759	Xenopus_tropicalis