EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001937 (Gene tree)
Gene ID: 102004335
Gene Symbol: PRDM14
Alias: -
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 14759 bases
Position: chrJH721904.1:9612059-9626817
Accession: 102004335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002685	zf-C2H2	PF00096.26	6.6e-21	1	3
ENSCLAP00000002685	zf-C2H2	PF00096.26	6.6e-21	2	3
ENSCLAP00000002685	zf-C2H2	PF00096.26	6.6e-21	3	3
ENSCLAP00000002685	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002740	PRDM14-201	2790	XM_005392110	ENSCLAP00000002685	579 (aa)	XP_005392167	UPI00038EA9FC

Gene Model

Click here to download ENSCLAG00000001937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001937	PRDM14	58	31.597	ENSCLAG00000005499	PRDM12	72	31.597
ENSCLAG00000001937	PRDM14	55	32.759	ENSCLAG00000007545	PRDM4	50	30.233
ENSCLAG00000001937	PRDM14	52	35.971	ENSCLAG00000005392	PRDM5	98	34.078
ENSCLAG00000001937	PRDM14	61	35.593	ENSCLAG00000001377	-	88	35.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001937	PRDM14	65	56.201	ENSACIG00000022698	prdm14	91	45.043	Amphilophus_citrinellus
ENSCLAG00000001937	PRDM14	98	44.948	ENSACLG00000025407	prdm14	91	45.375	Astatotilapia_calliptera
ENSCLAG00000001937	PRDM14	66	60.630	ENSAMXG00000000512	prdm14	79	60.630	Astyanax_mexicanus
ENSCLAG00000001937	PRDM14	99	72.125	ENSBTAG00000000060	PRDM14	100	72.125	Bos_taurus
ENSCLAG00000001937	PRDM14	99	72.049	ENSCHIG00000009297	PRDM14	100	72.049	Capra_hircus
ENSCLAG00000001937	PRDM14	70	82.673	ENSTSYG00000010610	PRDM14	97	82.673	Carlito_syrichta
ENSCLAG00000001937	PRDM14	99	70.157	ENSCPOG00000027176	PRDM14	100	70.157	Cavia_porcellus
ENSCLAG00000001937	PRDM14	99	66.840	ENSCCAG00000026032	PRDM14	100	68.924	Cebus_capucinus
ENSCLAG00000001937	PRDM14	74	53.596	ENSGACG00000002829	prdm14	85	53.596	Gasterosteus_aculeatus
ENSCLAG00000001937	PRDM14	99	49.738	ENSHBUG00000019660	prdm14	91	50.262	Haplochromis_burtoni
ENSCLAG00000001937	PRDM14	99	49.652	ENSMZEG00005021597	prdm14	91	50.087	Maylandia_zebra
ENSCLAG00000001937	PRDM14	99	49.825	ENSNBRG00000023669	prdm14	91	49.738	Neolamprologus_brichardi
ENSCLAG00000001937	PRDM14	99	84.468	ENSODEG00000003245	PRDM14	100	84.468	Octodon_degus
ENSCLAG00000001937	PRDM14	94	67.096	ENSOARG00000003528	PRDM14	100	67.096	Ovis_aries
ENSCLAG00000001937	PRDM14	99	49.738	ENSPNYG00000001938	prdm14	91	49.652	Pundamilia_nyererei
ENSCLAG00000001937	PRDM14	66	64.362	ENSSDUG00000013311	prdm14	87	50.089	Seriola_dumerili
ENSCLAG00000001937	PRDM14	66	62.850	ENSSLDG00000006506	prdm14	90	49.479	Seriola_lalandi_dorsalis
ENSCLAG00000001937	PRDM14	66	63.228	ENSTNIG00000008194	prdm14	100	63.228	Tetraodon_nigroviridis
ENSCLAG00000001937	PRDM14	51	81.111	ENSVPAG00000010736	-	62	81.111	Vicugna_pacos