EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000001938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 2317 bases
Position: chrJH721979.1:1840874-1843190
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002686	GUCT	PF08152.12	5.4e-20	1	1
ENSCLAP00000002686	DEAD	PF00270.29	3.3e-20	1	2
ENSCLAP00000002686	DEAD	PF00270.29	3.3e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002741	-	1806	-	ENSCLAP00000002686	601 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000001938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000001938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000001938	-	54	76.771	ENSCLAG00000001553	-	95	76.771
ENSCLAG00000001938	-	91	73.006	ENSCLAG00000012957	-	97	72.714
ENSCLAG00000001938	-	95	45.122	ENSCLAG00000012235	DDX21	73	47.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000001938	-	91	71.822	ENSG00000107625	DDX50	97	71.208	Homo_sapiens
ENSCLAG00000001938	-	92	71.450	ENSAMEG00000017992	DDX50	97	70.572	Ailuropoda_melanoleuca
ENSCLAG00000001938	-	91	60.945	ENSANAG00000017785	-	96	60.807	Aotus_nancymaae
ENSCLAG00000001938	-	53	61.919	ENSANAG00000030991	-	99	60.465	Aotus_nancymaae
ENSCLAG00000001938	-	91	71.689	ENSBTAG00000033413	DDX50	97	70.787	Bos_taurus
ENSCLAG00000001938	-	91	71.975	ENSCJAG00000018844	DDX50	99	77.984	Callithrix_jacchus
ENSCLAG00000001938	-	92	72.054	ENSCAFG00000013776	DDX50	97	71.130	Canis_familiaris
ENSCLAG00000001938	-	92	72.054	ENSCAFG00020025977	DDX50	97	71.130	Canis_lupus_dingo
ENSCLAG00000001938	-	91	71.669	ENSCHIG00000000285	DDX50	96	70.927	Capra_hircus
ENSCLAG00000001938	-	91	71.363	ENSTSYG00000004192	DDX50	99	77.540	Carlito_syrichta
ENSCLAG00000001938	-	90	60.225	ENSCAPG00000007230	-	97	60.819	Cavia_aperea
ENSCLAG00000001938	-	90	71.779	ENSCPOG00000002131	-	97	71.409	Cavia_porcellus
ENSCLAG00000001938	-	91	59.649	ENSCCAG00000030543	DDX50	96	59.913	Cebus_capucinus
ENSCLAG00000001938	-	96	64.583	ENSCATG00000035153	-	98	66.667	Cercocebus_atys
ENSCLAG00000001938	-	99	63.665	ENSCATG00000039259	-	97	70.000	Cercocebus_atys
ENSCLAG00000001938	-	91	72.239	ENSCATG00000032463	DDX50	98	71.449	Cercocebus_atys
ENSCLAG00000001938	-	91	71.975	ENSCSAG00000007703	DDX50	97	71.208	Chlorocebus_sabaeus
ENSCLAG00000001938	-	90	70.743	ENSCHOG00000000233	DDX50	97	69.922	Choloepus_hoffmanni
ENSCLAG00000001938	-	91	60.231	ENSCANG00000018820	-	94	62.478	Colobus_angolensis_palliatus
ENSCLAG00000001938	-	95	62.825	ENSCANG00000028077	-	94	60.720	Colobus_angolensis_palliatus
ENSCLAG00000001938	-	91	65.446	ENSCANG00000036450	-	96	64.920	Colobus_angolensis_palliatus
ENSCLAG00000001938	-	91	69.939	ENSCGRG00001020223	Ddx50	97	68.917	Cricetulus_griseus_chok1gshd
ENSCLAG00000001938	-	90	69.954	ENSCGRG00000015884	Ddx50	97	68.495	Cricetulus_griseus_crigri
ENSCLAG00000001938	-	83	64.157	ENSDNOG00000001675	DDX50	97	64.000	Dasypus_novemcinctus
ENSCLAG00000001938	-	91	70.904	ENSDORG00000007310	Ddx50	97	69.944	Dipodomys_ordii
ENSCLAG00000001938	-	85	78.626	ENSETEG00000014069	DDX50	87	75.885	Echinops_telfairi
ENSCLAG00000001938	-	91	71.233	ENSEASG00005015595	DDX50	96	70.506	Equus_asinus_asinus
ENSCLAG00000001938	-	91	71.385	ENSECAG00000023044	DDX50	96	70.646	Equus_caballus
ENSCLAG00000001938	-	79	70.383	ENSEEUG00000005782	DDX50	83	68.189	Erinaceus_europaeus
ENSCLAG00000001938	-	91	71.865	ENSFCAG00000012678	DDX50	96	71.108	Felis_catus
ENSCLAG00000001938	-	91	66.822	ENSFDAG00000016109	-	97	66.049	Fukomys_damarensis
ENSCLAG00000001938	-	56	76.857	ENSGGOG00000041063	-	96	74.366	Gorilla_gorilla
ENSCLAG00000001938	-	57	68.678	ENSGGOG00000022568	-	100	70.115	Gorilla_gorilla
ENSCLAG00000001938	-	91	71.822	ENSGGOG00000010100	DDX50	99	78.342	Gorilla_gorilla
ENSCLAG00000001938	-	91	70.928	ENSHGLG00000013466	DDX50	97	70.251	Heterocephalus_glaber_female
ENSCLAG00000001938	-	91	70.928	ENSHGLG00100017191	DDX50	97	70.251	Heterocephalus_glaber_male
ENSCLAG00000001938	-	91	64.250	ENSHGLG00100006568	-	97	62.367	Heterocephalus_glaber_male
ENSCLAG00000001938	-	91	70.213	ENSSTOG00000021852	-	97	68.759	Ictidomys_tridecemlineatus
ENSCLAG00000001938	-	99	67.181	ENSJJAG00000023928	-	97	68.583	Jaculus_jaculus
ENSCLAG00000001938	-	99	64.778	ENSJJAG00000019626	-	96	62.730	Jaculus_jaculus
ENSCLAG00000001938	-	91	71.516	ENSLAFG00000006186	DDX50	97	69.382	Loxodonta_africana
ENSCLAG00000001938	-	96	62.243	ENSMFAG00000045339	-	98	66.393	Macaca_fascicularis
ENSCLAG00000001938	-	91	71.975	ENSMFAG00000044067	DDX50	97	71.208	Macaca_fascicularis
ENSCLAG00000001938	-	88	62.898	ENSMMUG00000045343	-	88	62.191	Macaca_mulatta
ENSCLAG00000001938	-	91	71.975	ENSMMUG00000001006	DDX50	99	70.659	Macaca_mulatta
ENSCLAG00000001938	-	91	71.044	ENSMNEG00000031664	DDX50	96	70.247	Macaca_nemestrina
ENSCLAG00000001938	-	94	65.534	ENSMNEG00000045530	-	98	67.760	Macaca_nemestrina
ENSCLAG00000001938	-	91	69.832	ENSMLEG00000037313	DDX50	97	69.242	Mandrillus_leucophaeus
ENSCLAG00000001938	-	95	62.939	ENSMLEG00000041988	-	95	64.770	Mandrillus_leucophaeus
ENSCLAG00000001938	-	57	70.423	ENSMLEG00000041337	-	99	69.859	Mandrillus_leucophaeus
ENSCLAG00000001938	-	52	63.566	ENSMAUG00000022192	Ddx50	94	62.532	Mesocricetus_auratus
ENSCLAG00000001938	-	91	63.093	ENSMICG00000017539	DDX50	96	62.781	Microcebus_murinus
ENSCLAG00000001938	-	91	69.419	ENSMOCG00000001676	Ddx50	97	68.022	Microtus_ochrogaster
ENSCLAG00000001938	-	90	59.816	ENSMODG00000010741	DDX50	94	58.606	Monodelphis_domestica
ENSCLAG00000001938	-	91	68.971	MGP_CAROLIEiJ_G0015389	Ddx50	97	68.592	Mus_caroli
ENSCLAG00000001938	-	91	69.124	ENSMUSG00000020076	Ddx50	99	71.622	Mus_musculus
ENSCLAG00000001938	-	91	69.432	MGP_PahariEiJ_G0030805	Ddx50	97	69.296	Mus_pahari
ENSCLAG00000001938	-	91	69.124	MGP_SPRETEiJ_G0016200	Ddx50	97	69.014	Mus_spretus
ENSCLAG00000001938	-	86	70.096	ENSMPUG00000004589	DDX50	96	70.096	Mustela_putorius_furo
ENSCLAG00000001938	-	91	70.353	ENSMLUG00000017590	DDX50	97	69.718	Myotis_lucifugus
ENSCLAG00000001938	-	91	70.661	ENSNGAG00000004283	Ddx50	96	69.859	Nannospalax_galili
ENSCLAG00000001938	-	91	71.822	ENSNLEG00000011631	DDX50	97	71.208	Nomascus_leucogenys
ENSCLAG00000001938	-	86	57.848	ENSNLEG00000035506	-	99	69.325	Nomascus_leucogenys
ENSCLAG00000001938	-	91	69.313	ENSOPRG00000001619	DDX50	97	67.039	Ochotona_princeps
ENSCLAG00000001938	-	91	72.086	ENSODEG00000014597	-	97	70.886	Octodon_degus
ENSCLAG00000001938	-	96	47.714	ENSOANG00000004776	DDX50	83	48.554	Ornithorhynchus_anatinus
ENSCLAG00000001938	-	92	69.803	ENSOCUG00000002879	DDX50	97	68.917	Oryctolagus_cuniculus
ENSCLAG00000001938	-	91	71.516	ENSOGAG00000001844	DDX50	97	70.787	Otolemur_garnettii
ENSCLAG00000001938	-	91	71.669	ENSOARG00000005264	DDX50	96	70.927	Ovis_aries
ENSCLAG00000001938	-	91	71.669	ENSPPAG00000040723	DDX50	97	71.067	Pan_paniscus
ENSCLAG00000001938	-	56	69.186	ENSPPAG00000026788	-	99	70.640	Pan_paniscus
ENSCLAG00000001938	-	91	71.865	ENSPPRG00000015826	DDX50	97	71.108	Panthera_pardus
ENSCLAG00000001938	-	91	71.865	ENSPTIG00000008454	DDX50	97	71.108	Panthera_tigris_altaica
ENSCLAG00000001938	-	56	68.895	ENSPTRG00000044913	-	99	70.349	Pan_troglodytes
ENSCLAG00000001938	-	91	71.669	ENSPTRG00000002562	DDX50	97	71.067	Pan_troglodytes
ENSCLAG00000001938	-	91	67.661	ENSPANG00000022143	-	96	67.241	Papio_anubis
ENSCLAG00000001938	-	91	69.325	ENSPEMG00000020899	-	97	66.667	Peromyscus_maniculatus_bairdii
ENSCLAG00000001938	-	97	57.948	ENSPCIG00000016036	DDX50	96	57.245	Phascolarctos_cinereus
ENSCLAG00000001938	-	84	71.615	ENSPPYG00000002390	DDX50	99	70.659	Pongo_abelii
ENSCLAG00000001938	-	84	60.586	ENSPCAG00000009692	DDX50	99	59.935	Procavia_capensis
ENSCLAG00000001938	-	84	61.439	ENSPCOG00000012574	DDX50	90	60.276	Propithecus_coquereli
ENSCLAG00000001938	-	68	95.833	ENSPVAG00000009519	DDX50	74	80.374	Pteropus_vampyrus
ENSCLAG00000001938	-	91	68.971	ENSRNOG00000000396	Ddx50	98	77.273	Rattus_norvegicus
ENSCLAG00000001938	-	85	70.370	ENSRBIG00000042841	-	98	68.977	Rhinopithecus_bieti
ENSCLAG00000001938	-	96	61.238	ENSRBIG00000039673	-	93	59.494	Rhinopithecus_bieti
ENSCLAG00000001938	-	97	60.945	ENSRBIG00000036573	-	97	68.222	Rhinopithecus_bieti
ENSCLAG00000001938	-	97	61.146	ENSRROG00000022853	-	99	67.930	Rhinopithecus_roxellana
ENSCLAG00000001938	-	56	64.773	ENSRROG00000031940	-	97	65.341	Rhinopithecus_roxellana
ENSCLAG00000001938	-	91	71.975	ENSRROG00000032158	DDX50	99	70.509	Rhinopithecus_roxellana
ENSCLAG00000001938	-	91	64.174	ENSSBOG00000014441	DDX50	96	64.051	Saimiri_boliviensis_boliviensis
ENSCLAG00000001938	-	75	50.280	ENSSHAG00000005334	-	73	49.192	Sarcophilus_harrisii
ENSCLAG00000001938	-	90	59.660	ENSSHAG00000005690	DDX50	98	57.872	Sarcophilus_harrisii
ENSCLAG00000001938	-	85	62.660	ENSSARG00000013553	DDX50	97	57.203	Sorex_araneus
ENSCLAG00000001938	-	96	70.468	ENSSSCG00000010246	DDX50	96	69.522	Sus_scrofa
ENSCLAG00000001938	-	84	69.266	ENSTBEG00000001085	DDX50	87	66.514	Tupaia_belangeri
ENSCLAG00000001938	-	91	67.381	ENSTTRG00000012408	DDX50	96	66.573	Tursiops_truncatus
ENSCLAG00000001938	-	92	71.752	ENSUAMG00000010976	DDX50	99	73.024	Ursus_americanus
ENSCLAG00000001938	-	92	71.752	ENSUMAG00000007726	DDX50	97	70.851	Ursus_maritimus
ENSCLAG00000001938	-	91	71.233	ENSVPAG00000000626	DDX50	97	70.531	Vicugna_pacos
ENSCLAG00000001938	-	82	72.664	ENSVVUG00000020366	DDX50	98	78.075	Vulpes_vulpes