EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000002018 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 62804 bases
Position: chrJH721987.1:2280459-2343262
Accession: 102020046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002800	RRM_1	PF00076.22	1.5e-33	1	3
ENSCLAP00000002800	RRM_1	PF00076.22	1.5e-33	2	3
ENSCLAP00000002800	RRM_1	PF00076.22	1.5e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002856	SPEN-201	10311	XM_013507394	ENSCLAP00000002800	3436 (aa)	XP_013362848	-

Gene Model

Click here to download ENSCLAG00000002018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000002018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000002018	SPEN	99	89.589	ENSG00000065526	SPEN	99	98.316	Homo_sapiens
ENSCLAG00000002018	SPEN	76	73.558	ENSAPOG00000011411	si:ch1073-335m2.2	85	73.558	Acanthochromis_polyacanthus
ENSCLAG00000002018	SPEN	100	81.788	ENSAMEG00000011817	SPEN	99	81.953	Ailuropoda_melanoleuca
ENSCLAG00000002018	SPEN	60	78.947	ENSAOCG00000008077	si:ch1073-335m2.2	58	78.947	Amphiprion_ocellaris
ENSCLAG00000002018	SPEN	66	84.024	ENSAPEG00000013515	si:ch1073-335m2.2	70	84.024	Amphiprion_percula
ENSCLAG00000002018	SPEN	73	79.235	ENSATEG00000007674	si:ch1073-335m2.2	70	79.235	Anabas_testudineus
ENSCLAG00000002018	SPEN	94	79.333	ENSATEG00000005627	-	88	47.946	Anabas_testudineus
ENSCLAG00000002018	SPEN	100	66.337	ENSAPLG00000012618	SPEN	99	66.336	Anas_platyrhynchos
ENSCLAG00000002018	SPEN	100	58.811	ENSACAG00000013761	SPEN	99	59.830	Anolis_carolinensis
ENSCLAG00000002018	SPEN	99	89.863	ENSANAG00000034428	SPEN	99	82.089	Aotus_nancymaae
ENSCLAG00000002018	SPEN	78	76.531	ENSACLG00000021433	si:ch1073-335m2.2	82	76.531	Astatotilapia_calliptera
ENSCLAG00000002018	SPEN	85	66.397	ENSACLG00000016922	-	84	66.397	Astatotilapia_calliptera
ENSCLAG00000002018	SPEN	89	80.132	ENSAMXG00000012485	spen	97	47.111	Astyanax_mexicanus
ENSCLAG00000002018	SPEN	100	81.452	ENSBTAG00000018729	SPEN	99	81.617	Bos_taurus
ENSCLAG00000002018	SPEN	99	90.385	ENSCJAG00000008527	SPEN	99	81.588	Callithrix_jacchus
ENSCLAG00000002018	SPEN	89	80.782	ENSCAFG00000016132	-	96	89.329	Canis_familiaris
ENSCLAG00000002018	SPEN	100	82.068	ENSCHIG00000025070	SPEN	99	82.151	Capra_hircus
ENSCLAG00000002018	SPEN	92	80.918	ENSTSYG00000036016	SPEN	99	81.045	Carlito_syrichta
ENSCLAG00000002018	SPEN	100	95.041	ENSCAPG00000013803	SPEN	99	88.194	Cavia_aperea
ENSCLAG00000002018	SPEN	100	86.550	ENSCPOG00000014036	SPEN	100	86.719	Cavia_porcellus
ENSCLAG00000002018	SPEN	99	89.863	ENSCCAG00000020258	SPEN	99	79.284	Cebus_capucinus
ENSCLAG00000002018	SPEN	95	99.065	ENSCATG00000015079	SPEN	99	98.148	Cercocebus_atys
ENSCLAG00000002018	SPEN	100	67.332	ENSCPBG00000010477	SPEN	99	67.461	Chrysemys_picta_bellii
ENSCLAG00000002018	SPEN	100	81.132	ENSCANG00000034547	SPEN	99	81.149	Colobus_angolensis_palliatus
ENSCLAG00000002018	SPEN	99	86.179	ENSCGRG00001007725	Spen	99	78.700	Cricetulus_griseus_chok1gshd
ENSCLAG00000002018	SPEN	99	86.179	ENSCGRG00000010581	Spen	100	77.981	Cricetulus_griseus_crigri
ENSCLAG00000002018	SPEN	75	81.333	ENSCSEG00000003915	-	84	70.464	Cynoglossus_semilaevis
ENSCLAG00000002018	SPEN	84	61.172	ENSCVAG00000009075	si:ch1073-335m2.2	87	61.172	Cyprinodon_variegatus
ENSCLAG00000002018	SPEN	82	81.667	ENSCVAG00000016346	-	89	47.676	Cyprinodon_variegatus
ENSCLAG00000002018	SPEN	82	61.044	ENSDARG00000074332	si:ch1073-335m2.2	85	61.044	Danio_rerio
ENSCLAG00000002018	SPEN	97	46.120	ENSDARG00000074245	spen	79	85.981	Danio_rerio
ENSCLAG00000002018	SPEN	100	81.348	ENSDNOG00000041948	SPEN	99	81.327	Dasypus_novemcinctus
ENSCLAG00000002018	SPEN	100	77.356	ENSDORG00000023909	Spen	100	77.862	Dipodomys_ordii
ENSCLAG00000002018	SPEN	69	95.397	ENSETEG00000016692	-	67	95.397	Echinops_telfairi
ENSCLAG00000002018	SPEN	95	99.065	ENSEASG00005015911	SPEN	99	99.065	Equus_asinus_asinus
ENSCLAG00000002018	SPEN	95	99.065	ENSECAG00000008833	SPEN	99	99.065	Equus_caballus
ENSCLAG00000002018	SPEN	72	97.674	ENSEEUG00000010255	SPEN	75	97.674	Erinaceus_europaeus
ENSCLAG00000002018	SPEN	80	75.385	ENSELUG00000007726	si:ch1073-335m2.2	84	75.385	Esox_lucius
ENSCLAG00000002018	SPEN	89	62.488	ENSFALG00000003551	SPEN	100	62.673	Ficedula_albicollis
ENSCLAG00000002018	SPEN	99	83.643	ENSFDAG00000010212	SPEN	100	83.813	Fukomys_damarensis
ENSCLAG00000002018	SPEN	59	71.981	ENSFHEG00000004544	si:ch1073-335m2.2	92	72.464	Fundulus_heteroclitus
ENSCLAG00000002018	SPEN	53	79.661	ENSGMOG00000008156	si:ch1073-335m2.2	54	79.661	Gadus_morhua
ENSCLAG00000002018	SPEN	64	76.159	ENSGMOG00000008397	-	61	76.159	Gadus_morhua
ENSCLAG00000002018	SPEN	100	66.188	ENSGALG00000036932	SPEN	98	66.187	Gallus_gallus
ENSCLAG00000002018	SPEN	100	43.328	ENSGAFG00000015819	-	80	71.967	Gambusia_affinis
ENSCLAG00000002018	SPEN	50	83.333	ENSGACG00000001176	si:ch1073-335m2.2	50	80.838	Gasterosteus_aculeatus
ENSCLAG00000002018	SPEN	89	48.122	ENSGACG00000005341	-	89	48.358	Gasterosteus_aculeatus
ENSCLAG00000002018	SPEN	99	96.694	ENSGAGG00000020785	SPEN	99	67.893	Gopherus_agassizii
ENSCLAG00000002018	SPEN	70	84.615	ENSHBUG00000023253	si:ch1073-335m2.2	88	76.531	Haplochromis_burtoni
ENSCLAG00000002018	SPEN	93	67.206	ENSHBUG00000020626	-	93	67.206	Haplochromis_burtoni
ENSCLAG00000002018	SPEN	100	83.870	ENSHGLG00000019259	SPEN	99	84.318	Heterocephalus_glaber_female
ENSCLAG00000002018	SPEN	89	94.102	ENSHGLG00100019294	SPEN	95	89.047	Heterocephalus_glaber_male
ENSCLAG00000002018	SPEN	80	66.507	ENSIPUG00000018212	si:ch1073-335m2.2	87	66.507	Ictalurus_punctatus
ENSCLAG00000002018	SPEN	99	83.850	ENSSTOG00000021428	SPEN	100	83.998	Ictidomys_tridecemlineatus
ENSCLAG00000002018	SPEN	100	80.546	ENSJJAG00000010882	Spen	99	80.639	Jaculus_jaculus
ENSCLAG00000002018	SPEN	89	46.604	ENSKMAG00000003882	-	68	54.354	Kryptolebias_marmoratus
ENSCLAG00000002018	SPEN	78	72.906	ENSKMAG00000021725	si:ch1073-335m2.2	82	72.906	Kryptolebias_marmoratus
ENSCLAG00000002018	SPEN	95	95.652	ENSLACG00000003258	SPEN	98	95.652	Latimeria_chalumnae
ENSCLAG00000002018	SPEN	97	52.544	ENSLOCG00000007896	si:ch1073-335m2.2	97	52.959	Lepisosteus_oculatus
ENSCLAG00000002018	SPEN	100	81.798	ENSLAFG00000004524	SPEN	99	81.743	Loxodonta_africana
ENSCLAG00000002018	SPEN	77	69.863	ENSMAMG00000023870	si:ch1073-335m2.2	82	69.863	Mastacembelus_armatus
ENSCLAG00000002018	SPEN	78	76.531	ENSMZEG00005011762	si:ch1073-335m2.2	82	76.531	Maylandia_zebra
ENSCLAG00000002018	SPEN	76	66.397	ENSMZEG00005021491	-	82	66.397	Maylandia_zebra
ENSCLAG00000002018	SPEN	99	84.054	ENSMAUG00000008318	Spen	99	77.824	Mesocricetus_auratus
ENSCLAG00000002018	SPEN	100	83.178	ENSMICG00000030994	SPEN	99	83.306	Microcebus_murinus
ENSCLAG00000002018	SPEN	100	79.009	ENSMOCG00000016083	Spen	99	78.831	Microtus_ochrogaster
ENSCLAG00000002018	SPEN	100	66.271	ENSMODG00000003411	SPEN	99	65.713	Monodelphis_domestica
ENSCLAG00000002018	SPEN	94	78.667	ENSMALG00000008625	-	88	47.886	Monopterus_albus
ENSCLAG00000002018	SPEN	100	77.289	MGP_CAROLIEiJ_G0026745	Spen	99	77.519	Mus_caroli
ENSCLAG00000002018	SPEN	100	76.932	ENSMUSG00000040761	Spen	99	77.327	Mus_musculus
ENSCLAG00000002018	SPEN	100	76.685	MGP_PahariEiJ_G0029076	Spen	99	76.823	Mus_pahari
ENSCLAG00000002018	SPEN	100	76.876	MGP_SPRETEiJ_G0027724	Spen	99	77.492	Mus_spretus
ENSCLAG00000002018	SPEN	99	81.247	ENSMPUG00000016317	SPEN	100	81.577	Mustela_putorius_furo
ENSCLAG00000002018	SPEN	94	81.880	ENSMLUG00000010144	SPEN	98	96.374	Myotis_lucifugus
ENSCLAG00000002018	SPEN	99	87.936	ENSNGAG00000000641	Spen	99	81.303	Nannospalax_galili
ENSCLAG00000002018	SPEN	72	67.611	ENSNBRG00000022090	-	93	67.611	Neolamprologus_brichardi
ENSCLAG00000002018	SPEN	74	76.531	ENSNBRG00000005733	si:ch1073-335m2.2	80	76.531	Neolamprologus_brichardi
ENSCLAG00000002018	SPEN	99	87.166	ENSNLEG00000007652	SPEN	99	82.318	Nomascus_leucogenys
ENSCLAG00000002018	SPEN	90	93.750	ENSMEUG00000002422	SPEN	90	93.750	Notamacropus_eugenii
ENSCLAG00000002018	SPEN	94	87.912	ENSOPRG00000015800	SPEN	93	86.484	Ochotona_princeps
ENSCLAG00000002018	SPEN	100	88.503	ENSODEG00000016644	SPEN	99	88.076	Octodon_degus
ENSCLAG00000002018	SPEN	93	67.206	ENSONIG00000006573	-	94	79.924	Oreochromis_niloticus
ENSCLAG00000002018	SPEN	100	78.805	ENSOCUG00000010840	SPEN	99	79.208	Oryctolagus_cuniculus
ENSCLAG00000002018	SPEN	72	81.657	ENSORLG00000018414	si:ch1073-335m2.2	81	60.990	Oryzias_latipes
ENSCLAG00000002018	SPEN	73	77.157	ENSORLG00020007735	-	59	77.157	Oryzias_latipes_hni
ENSCLAG00000002018	SPEN	71	81.657	ENSORLG00020009351	si:ch1073-335m2.2	87	56.655	Oryzias_latipes_hni
ENSCLAG00000002018	SPEN	71	81.065	ENSORLG00015005537	si:ch1073-335m2.2	79	65.919	Oryzias_latipes_hsok
ENSCLAG00000002018	SPEN	67	77.157	ENSORLG00015022085	-	67	77.157	Oryzias_latipes_hsok
ENSCLAG00000002018	SPEN	74	65.639	ENSOMEG00000004509	si:ch1073-335m2.2	86	68.493	Oryzias_melastigma
ENSCLAG00000002018	SPEN	63	83.333	ENSOMEG00000007639	-	62	83.333	Oryzias_melastigma
ENSCLAG00000002018	SPEN	100	82.772	ENSOGAG00000025110	SPEN	99	82.991	Otolemur_garnettii
ENSCLAG00000002018	SPEN	100	81.538	ENSOARG00000008477	SPEN	99	81.593	Ovis_aries
ENSCLAG00000002018	SPEN	99	89.315	ENSPPAG00000035690	SPEN	100	82.575	Pan_paniscus
ENSCLAG00000002018	SPEN	99	89.315	ENSPTRG00000000210	SPEN	99	82.548	Pan_troglodytes
ENSCLAG00000002018	SPEN	100	48.928	ENSPKIG00000010492	si:ch1073-335m2.2	88	54.549	Paramormyrops_kingsleyae
ENSCLAG00000002018	SPEN	83	84.444	ENSPKIG00000002617	SPEN	80	78.750	Paramormyrops_kingsleyae
ENSCLAG00000002018	SPEN	100	66.418	ENSPSIG00000008026	SPEN	99	65.959	Pelodiscus_sinensis
ENSCLAG00000002018	SPEN	99	86.486	ENSPEMG00000022997	Spen	100	79.439	Peromyscus_maniculatus_bairdii
ENSCLAG00000002018	SPEN	84	74.627	ENSPFOG00000017986	si:ch1073-335m2.2	84	74.627	Poecilia_formosa
ENSCLAG00000002018	SPEN	73	74.627	ENSPLAG00000016625	si:ch1073-335m2.2	76	74.627	Poecilia_latipinna
ENSCLAG00000002018	SPEN	86	74.627	ENSPMEG00000002674	si:ch1073-335m2.2	54	74.627	Poecilia_mexicana
ENSCLAG00000002018	SPEN	100	42.907	ENSPMEG00000006764	-	80	71.429	Poecilia_mexicana
ENSCLAG00000002018	SPEN	97	44.477	ENSPREG00000010399	-	80	71.429	Poecilia_reticulata
ENSCLAG00000002018	SPEN	99	89.589	ENSPPYG00000001834	SPEN	99	82.867	Pongo_abelii
ENSCLAG00000002018	SPEN	91	88.959	ENSPCAG00000009543	SPEN	92	87.307	Procavia_capensis
ENSCLAG00000002018	SPEN	100	82.330	ENSPCOG00000021735	SPEN	99	82.330	Propithecus_coquereli
ENSCLAG00000002018	SPEN	82	90.901	ENSPVAG00000013794	SPEN	81	90.956	Pteropus_vampyrus
ENSCLAG00000002018	SPEN	78	76.531	ENSPNYG00000009042	si:ch1073-335m2.2	82	76.531	Pundamilia_nyererei
ENSCLAG00000002018	SPEN	85	67.206	ENSPNYG00000012379	-	84	67.206	Pundamilia_nyererei
ENSCLAG00000002018	SPEN	89	69.524	ENSPNAG00000011452	si:ch1073-335m2.2	84	69.524	Pygocentrus_nattereri
ENSCLAG00000002018	SPEN	100	77.643	ENSRNOG00000033556	Spen	100	76.656	Rattus_norvegicus
ENSCLAG00000002018	SPEN	100	82.934	ENSRBIG00000039654	SPEN	100	82.760	Rhinopithecus_bieti
ENSCLAG00000002018	SPEN	100	82.363	ENSRROG00000035686	SPEN	100	82.185	Rhinopithecus_roxellana
ENSCLAG00000002018	SPEN	100	82.387	ENSSBOG00000028770	SPEN	99	82.499	Saimiri_boliviensis_boliviensis
ENSCLAG00000002018	SPEN	100	66.519	ENSSHAG00000004960	SPEN	98	93.474	Sarcophilus_harrisii
ENSCLAG00000002018	SPEN	90	82.632	ENSSFOG00015010267	si:ch1073-335m2.2	78	53.013	Scleropages_formosus
ENSCLAG00000002018	SPEN	64	73.077	ENSSMAG00000000125	si:ch1073-335m2.2	78	73.077	Scophthalmus_maximus
ENSCLAG00000002018	SPEN	94	78.667	ENSSMAG00000008996	-	72	69.198	Scophthalmus_maximus
ENSCLAG00000002018	SPEN	95	74.627	ENSSDUG00000008416	si:ch1073-335m2.2	92	74.627	Seriola_dumerili
ENSCLAG00000002018	SPEN	79	79.333	ENSSDUG00000003476	-	80	73.109	Seriola_dumerili
ENSCLAG00000002018	SPEN	80	73.077	ENSSLDG00000023347	si:ch1073-335m2.2	84	73.077	Seriola_lalandi_dorsalis
ENSCLAG00000002018	SPEN	89	62.820	ENSSPUG00000001866	-	100	62.266	Sphenodon_punctatus
ENSCLAG00000002018	SPEN	50	83.432	ENSSPAG00000012454	si:ch1073-335m2.2	50	83.432	Stegastes_partitus
ENSCLAG00000002018	SPEN	86	82.697	ENSSSCG00000034484	SPEN	99	82.451	Sus_scrofa
ENSCLAG00000002018	SPEN	94	76.667	ENSTRUG00000024350	-	88	46.886	Takifugu_rubripes
ENSCLAG00000002018	SPEN	77	82.840	ENSTRUG00000021008	si:ch1073-335m2.2	71	82.840	Takifugu_rubripes
ENSCLAG00000002018	SPEN	97	73.464	ENSTNIG00000010907	-	69	73.710	Tetraodon_nigroviridis
ENSCLAG00000002018	SPEN	77	98.601	ENSTBEG00000003628	SPEN	75	98.601	Tupaia_belangeri
ENSCLAG00000002018	SPEN	82	95.170	ENSTTRG00000015704	SPEN	79	94.901	Tursiops_truncatus
ENSCLAG00000002018	SPEN	100	81.898	ENSUAMG00000009600	SPEN	99	81.980	Ursus_americanus
ENSCLAG00000002018	SPEN	100	80.817	ENSUMAG00000021641	SPEN	99	80.899	Ursus_maritimus
ENSCLAG00000002018	SPEN	95	99.065	ENSVVUG00000028951	SPEN	99	99.065	Vulpes_vulpes
ENSCLAG00000002018	SPEN	100	53.740	ENSXETG00000023114	SPEN	99	53.499	Xenopus_tropicalis
ENSCLAG00000002018	SPEN	90	58.451	ENSXCOG00000004516	si:ch1073-335m2.2	84	58.451	Xiphophorus_couchianus
ENSCLAG00000002018	SPEN	96	58.993	ENSXMAG00000029887	si:ch1073-335m2.2	88	58.993	Xiphophorus_maculatus
ENSCLAG00000002018	SPEN	97	45.062	ENSXMAG00000021384	-	80	69.328	Xiphophorus_maculatus