EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000002072 (Gene tree)
Gene ID: 102010589
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 13580 bases
Position: chrJH721943.1:2375313-2388892
Accession: 102010589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000002881	Exo_endo_phos	PF03372.23	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000002938	TDP2-201	4869	XM_005403367	ENSCLAP00000002881	358 (aa)	XP_005403424	UPI00038F07E2

Gene Model

Click here to download ENSCLAG00000002072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000002072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000002072	TDP2	95	86.217	ENSG00000111802	TDP2	100	83.978	Homo_sapiens
ENSCLAG00000002072	TDP2	72	53.282	ENSAPOG00000018379	-	91	53.282	Acanthochromis_polyacanthus
ENSCLAG00000002072	TDP2	78	89.568	ENSAMEG00000010230	TDP2	99	89.568	Ailuropoda_melanoleuca
ENSCLAG00000002072	TDP2	51	53.261	ENSAOCG00000010081	-	81	53.261	Amphiprion_ocellaris
ENSCLAG00000002072	TDP2	71	52.734	ENSAPEG00000004208	-	91	52.734	Amphiprion_percula
ENSCLAG00000002072	TDP2	76	48.540	ENSATEG00000010663	-	89	48.540	Anabas_testudineus
ENSCLAG00000002072	TDP2	94	65.075	ENSACAG00000002332	TDP2	96	63.764	Anolis_carolinensis
ENSCLAG00000002072	TDP2	96	85.131	ENSANAG00000020033	TDP2	100	82.597	Aotus_nancymaae
ENSCLAG00000002072	TDP2	75	54.074	ENSACLG00000016148	tdp2b	95	54.074	Astatotilapia_calliptera
ENSCLAG00000002072	TDP2	80	47.569	ENSACLG00000016174	tdp2b	97	47.569	Astatotilapia_calliptera
ENSCLAG00000002072	TDP2	80	47.917	ENSACLG00000016132	tdp2b	97	47.917	Astatotilapia_calliptera
ENSCLAG00000002072	TDP2	98	51.571	ENSAMXG00000011775	tdp2b	99	51.571	Astyanax_mexicanus
ENSCLAG00000002072	TDP2	76	50.000	ENSAMXG00000036549	tdp2a	89	50.000	Astyanax_mexicanus
ENSCLAG00000002072	TDP2	95	83.965	ENSBTAG00000000365	TDP2	96	83.381	Bos_taurus
ENSCLAG00000002072	TDP2	91	31.307	WBGene00013405	tdpt-1	85	31.307	Caenorhabditis_elegans
ENSCLAG00000002072	TDP2	100	82.044	ENSCJAG00000021963	-	100	82.044	Callithrix_jacchus
ENSCLAG00000002072	TDP2	100	82.873	ENSCJAG00000006074	TDP2	100	82.873	Callithrix_jacchus
ENSCLAG00000002072	TDP2	99	82.817	ENSCAFG00000010428	TDP2	96	91.367	Canis_familiaris
ENSCLAG00000002072	TDP2	78	91.367	ENSCAFG00020009994	TDP2	96	91.367	Canis_lupus_dingo
ENSCLAG00000002072	TDP2	78	88.214	ENSCHIG00000015294	-	95	88.214	Capra_hircus
ENSCLAG00000002072	TDP2	86	87.702	ENSTSYG00000037199	TDP2	100	87.702	Carlito_syrichta
ENSCLAG00000002072	TDP2	100	93.855	ENSCPOG00000006390	TDP2	100	93.855	Cavia_porcellus
ENSCLAG00000002072	TDP2	100	83.702	ENSCCAG00000022734	TDP2	100	83.702	Cebus_capucinus
ENSCLAG00000002072	TDP2	100	84.916	ENSCATG00000022076	TDP2	94	89.860	Cercocebus_atys
ENSCLAG00000002072	TDP2	100	84.916	ENSCSAG00000007769	TDP2	100	84.916	Chlorocebus_sabaeus
ENSCLAG00000002072	TDP2	96	68.805	ENSCPBG00000006551	TDP2	90	68.466	Chrysemys_picta_bellii
ENSCLAG00000002072	TDP2	100	84.916	ENSCANG00000040122	TDP2	100	84.916	Colobus_angolensis_palliatus
ENSCLAG00000002072	TDP2	95	67.449	ENSCGRG00001000384	Tdp2	95	66.006	Cricetulus_griseus_chok1gshd
ENSCLAG00000002072	TDP2	95	66.374	ENSCGRG00000010250	Tdp2	97	65.819	Cricetulus_griseus_crigri
ENSCLAG00000002072	TDP2	94	52.571	ENSCVAG00000003114	tdp2b	95	52.571	Cyprinodon_variegatus
ENSCLAG00000002072	TDP2	94	52.603	ENSDARG00000035954	tdp2b	95	52.603	Danio_rerio
ENSCLAG00000002072	TDP2	68	50.204	ENSDARG00000069941	tdp2a	55	50.204	Danio_rerio
ENSCLAG00000002072	TDP2	98	84.046	ENSDNOG00000044082	TDP2	96	84.046	Dasypus_novemcinctus
ENSCLAG00000002072	TDP2	78	86.691	ENSETEG00000019096	TDP2	100	86.691	Echinops_telfairi
ENSCLAG00000002072	TDP2	74	53.383	ENSEBUG00000006535	tdp2a	62	53.383	Eptatretus_burgeri
ENSCLAG00000002072	TDP2	95	85.337	ENSEASG00005007656	TDP2	98	83.616	Equus_asinus_asinus
ENSCLAG00000002072	TDP2	95	85.337	ENSECAG00000014264	TDP2	97	84.330	Equus_caballus
ENSCLAG00000002072	TDP2	95	80.938	ENSEEUG00000010776	TDP2	98	78.771	Erinaceus_europaeus
ENSCLAG00000002072	TDP2	93	53.315	ENSELUG00000016449	tdp2b	95	53.315	Esox_lucius
ENSCLAG00000002072	TDP2	77	46.570	ENSELUG00000009321	tdp2a	86	46.570	Esox_lucius
ENSCLAG00000002072	TDP2	98	85.470	ENSFCAG00000025612	TDP2	97	85.470	Felis_catus
ENSCLAG00000002072	TDP2	95	60.526	ENSFALG00000004710	TDP2	94	61.111	Ficedula_albicollis
ENSCLAG00000002072	TDP2	78	94.245	ENSFDAG00000006512	TDP2	96	94.245	Fukomys_damarensis
ENSCLAG00000002072	TDP2	73	49.621	ENSFHEG00000013560	-	90	49.621	Fundulus_heteroclitus
ENSCLAG00000002072	TDP2	95	66.667	ENSGALG00000013637	TDP2	95	66.006	Gallus_gallus
ENSCLAG00000002072	TDP2	99	68.258	ENSGAGG00000002853	TDP2	91	68.258	Gopherus_agassizii
ENSCLAG00000002072	TDP2	95	85.924	ENSGGOG00000014237	TDP2	100	83.702	Gorilla_gorilla
ENSCLAG00000002072	TDP2	58	56.731	ENSHBUG00000005421	-	86	56.731	Haplochromis_burtoni
ENSCLAG00000002072	TDP2	98	52.877	ENSHBUG00000002714	tdp2b	98	52.877	Haplochromis_burtoni
ENSCLAG00000002072	TDP2	100	90.808	ENSHGLG00000008655	TDP2	100	90.808	Heterocephalus_glaber_female
ENSCLAG00000002072	TDP2	100	91.086	ENSHGLG00100019087	TDP2	100	91.086	Heterocephalus_glaber_male
ENSCLAG00000002072	TDP2	93	53.631	ENSIPUG00000013691	tdp2b	94	53.631	Ictalurus_punctatus
ENSCLAG00000002072	TDP2	94	66.568	ENSJJAG00000021685	Tdp2	97	66.568	Jaculus_jaculus
ENSCLAG00000002072	TDP2	73	50.951	ENSKMAG00000015485	-	84	50.951	Kryptolebias_marmoratus
ENSCLAG00000002072	TDP2	95	59.091	ENSLACG00000008852	TDP2	95	59.091	Latimeria_chalumnae
ENSCLAG00000002072	TDP2	77	59.928	ENSLOCG00000005817	tdp2b	99	59.928	Lepisosteus_oculatus
ENSCLAG00000002072	TDP2	95	85.337	ENSLAFG00000002567	TDP2	99	84.330	Loxodonta_africana
ENSCLAG00000002072	TDP2	100	85.196	ENSMFAG00000045296	TDP2	100	85.196	Macaca_fascicularis
ENSCLAG00000002072	TDP2	100	85.196	ENSMMUG00000009803	TDP2	100	85.196	Macaca_mulatta
ENSCLAG00000002072	TDP2	100	85.196	ENSMNEG00000038003	TDP2	100	85.196	Macaca_nemestrina
ENSCLAG00000002072	TDP2	100	84.637	ENSMLEG00000028883	TDP2	100	84.637	Mandrillus_leucophaeus
ENSCLAG00000002072	TDP2	95	54.391	ENSMAMG00000013654	tdp2b	95	54.391	Mastacembelus_armatus
ENSCLAG00000002072	TDP2	72	49.421	ENSMZEG00005004103	tdp2b	86	49.421	Maylandia_zebra
ENSCLAG00000002072	TDP2	74	52.256	ENSMZEG00005004153	tdp2b	94	52.256	Maylandia_zebra
ENSCLAG00000002072	TDP2	70	52.756	ENSMZEG00005004055	tdp2b	84	52.756	Maylandia_zebra
ENSCLAG00000002072	TDP2	80	47.917	ENSMZEG00005004126	tdp2b	97	47.917	Maylandia_zebra
ENSCLAG00000002072	TDP2	98	52.329	ENSMZEG00005003950	tdp2b	98	52.329	Maylandia_zebra
ENSCLAG00000002072	TDP2	72	46.154	ENSMZEG00005003980	-	84	46.154	Maylandia_zebra
ENSCLAG00000002072	TDP2	74	54.511	ENSMZEG00005004077	tdp2b	90	54.511	Maylandia_zebra
ENSCLAG00000002072	TDP2	95	68.129	ENSMGAG00000008014	TDP2	94	67.422	Meleagris_gallopavo
ENSCLAG00000002072	TDP2	95	67.155	ENSMAUG00000014451	Tdp2	94	66.000	Mesocricetus_auratus
ENSCLAG00000002072	TDP2	99	86.479	ENSMICG00000000039	TDP2	95	92.832	Microcebus_murinus
ENSCLAG00000002072	TDP2	95	69.208	ENSMOCG00000002823	Tdp2	94	68.000	Microtus_ochrogaster
ENSCLAG00000002072	TDP2	85	67.524	ENSMODG00000011653	TDP2	95	67.846	Monodelphis_domestica
ENSCLAG00000002072	TDP2	68	53.252	ENSMALG00000005368	-	83	53.252	Monopterus_albus
ENSCLAG00000002072	TDP2	95	67.742	MGP_CAROLIEiJ_G0018354	Tdp2	95	65.374	Mus_caroli
ENSCLAG00000002072	TDP2	95	67.723	ENSMUSG00000035958	Tdp2	95	65.928	Mus_musculus
ENSCLAG00000002072	TDP2	95	66.569	MGP_PahariEiJ_G0019417	Tdp2	94	65.330	Mus_pahari
ENSCLAG00000002072	TDP2	99	66.111	MGP_SPRETEiJ_G0019220	Tdp2	94	66.111	Mus_spretus
ENSCLAG00000002072	TDP2	95	84.257	ENSMPUG00000004516	TDP2	100	82.222	Mustela_putorius_furo
ENSCLAG00000002072	TDP2	98	76.989	ENSMLUG00000013506	TDP2	97	76.989	Myotis_lucifugus
ENSCLAG00000002072	TDP2	99	62.534	ENSNGAG00000001375	Tdp2	99	62.534	Nannospalax_galili
ENSCLAG00000002072	TDP2	100	85.475	ENSNLEG00000002447	TDP2	100	85.475	Nomascus_leucogenys
ENSCLAG00000002072	TDP2	97	85.260	ENSOPRG00000016299	TDP2	99	85.260	Ochotona_princeps
ENSCLAG00000002072	TDP2	78	95.683	ENSODEG00000014018	TDP2	95	95.683	Octodon_degus
ENSCLAG00000002072	TDP2	97	86.167	ENSOCUG00000013773	TDP2	96	86.167	Oryctolagus_cuniculus
ENSCLAG00000002072	TDP2	73	47.727	ENSORLG00000001661	-	96	47.727	Oryzias_latipes
ENSCLAG00000002072	TDP2	73	47.727	ENSORLG00020004634	-	96	47.727	Oryzias_latipes_hni
ENSCLAG00000002072	TDP2	74	43.446	ENSORLG00015008190	-	97	43.446	Oryzias_latipes_hsok
ENSCLAG00000002072	TDP2	77	46.763	ENSOMEG00000015899	-	92	49.194	Oryzias_melastigma
ENSCLAG00000002072	TDP2	100	80.939	ENSOGAG00000025303	TDP2	99	80.939	Otolemur_garnettii
ENSCLAG00000002072	TDP2	95	86.510	ENSPPAG00000029023	TDP2	100	84.254	Pan_paniscus
ENSCLAG00000002072	TDP2	98	84.900	ENSPPRG00000015398	TDP2	97	84.900	Panthera_pardus
ENSCLAG00000002072	TDP2	81	86.598	ENSPTIG00000018574	TDP2	98	86.598	Panthera_tigris_altaica
ENSCLAG00000002072	TDP2	95	86.510	ENSPTRG00000017778	TDP2	100	84.254	Pan_troglodytes
ENSCLAG00000002072	TDP2	100	84.637	ENSPANG00000017590	TDP2	100	84.637	Papio_anubis
ENSCLAG00000002072	TDP2	97	52.732	ENSPKIG00000006483	tdp2b	99	52.732	Paramormyrops_kingsleyae
ENSCLAG00000002072	TDP2	78	73.381	ENSPSIG00000004948	TDP2	96	73.381	Pelodiscus_sinensis
ENSCLAG00000002072	TDP2	95	69.501	ENSPEMG00000001788	Tdp2	94	68.571	Peromyscus_maniculatus_bairdii
ENSCLAG00000002072	TDP2	70	47.191	ENSPMAG00000001570	tdp2b	97	47.191	Petromyzon_marinus
ENSCLAG00000002072	TDP2	95	68.915	ENSPCIG00000007316	TDP2	92	67.705	Phascolarctos_cinereus
ENSCLAG00000002072	TDP2	69	50.000	ENSPFOG00000017990	-	90	50.000	Poecilia_formosa
ENSCLAG00000002072	TDP2	79	45.548	ENSPLAG00000019439	-	92	45.548	Poecilia_latipinna
ENSCLAG00000002072	TDP2	69	50.400	ENSPMEG00000010824	-	84	50.400	Poecilia_mexicana
ENSCLAG00000002072	TDP2	95	85.337	ENSPPYG00000016282	TDP2	92	83.149	Pongo_abelii
ENSCLAG00000002072	TDP2	95	89.412	ENSPCOG00000021415	TDP2	98	93.525	Propithecus_coquereli
ENSCLAG00000002072	TDP2	82	47.436	ENSPNYG00000011504	tdp2b	98	47.436	Pundamilia_nyererei
ENSCLAG00000002072	TDP2	63	45.217	ENSPNYG00000001944	-	72	51.445	Pundamilia_nyererei
ENSCLAG00000002072	TDP2	98	51.233	ENSPNYG00000011532	tdp2b	98	51.233	Pundamilia_nyererei
ENSCLAG00000002072	TDP2	70	52.778	ENSPNAG00000022162	tdp2a	64	52.778	Pygocentrus_nattereri
ENSCLAG00000002072	TDP2	96	67.251	ENSRNOG00000018246	Tdp2	95	66.189	Rattus_norvegicus
ENSCLAG00000002072	TDP2	100	84.637	ENSRBIG00000037119	TDP2	100	84.637	Rhinopithecus_bieti
ENSCLAG00000002072	TDP2	100	84.637	ENSRROG00000005025	TDP2	94	89.085	Rhinopithecus_roxellana
ENSCLAG00000002072	TDP2	100	84.254	ENSSBOG00000028734	TDP2	91	92.086	Saimiri_boliviensis_boliviensis
ENSCLAG00000002072	TDP2	99	67.598	ENSSHAG00000002506	TDP2	95	67.598	Sarcophilus_harrisii
ENSCLAG00000002072	TDP2	71	53.150	ENSSFOG00015011322	-	71	53.150	Scleropages_formosus
ENSCLAG00000002072	TDP2	78	81.004	ENSSARG00000013547	TDP2	100	81.004	Sorex_araneus
ENSCLAG00000002072	TDP2	95	64.589	ENSSPUG00000008288	TDP2	100	62.973	Sphenodon_punctatus
ENSCLAG00000002072	TDP2	95	87.390	ENSSSCG00000001092	TDP2	96	86.494	Sus_scrofa
ENSCLAG00000002072	TDP2	73	67.816	ENSTGUG00000009035	TDP2	100	67.816	Taeniopygia_guttata
ENSCLAG00000002072	TDP2	69	54.000	ENSTRUG00000012218	-	87	54.000	Takifugu_rubripes
ENSCLAG00000002072	TDP2	94	53.757	ENSTRUG00000014347	tdp2b	95	53.757	Takifugu_rubripes
ENSCLAG00000002072	TDP2	70	53.640	ENSTNIG00000010260	TDP2	99	53.640	Tetraodon_nigroviridis
ENSCLAG00000002072	TDP2	94	53.258	ENSTNIG00000017792	tdp2b	95	53.258	Tetraodon_nigroviridis
ENSCLAG00000002072	TDP2	95	86.217	ENSTTRG00000016376	TDP2	97	85.185	Tursiops_truncatus
ENSCLAG00000002072	TDP2	100	79.609	ENSUAMG00000025939	TDP2	100	79.609	Ursus_americanus
ENSCLAG00000002072	TDP2	78	89.568	ENSUMAG00000020111	TDP2	93	89.568	Ursus_maritimus
ENSCLAG00000002072	TDP2	93	63.401	ENSXETG00000014826	tdp2	93	63.401	Xenopus_tropicalis
ENSCLAG00000002072	TDP2	69	50.598	ENSXCOG00000010778	-	69	50.598	Xiphophorus_couchianus
ENSCLAG00000002072	TDP2	69	50.598	ENSXMAG00000022252	-	72	50.598	Xiphophorus_maculatus