EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000002440 (Gene tree)
Gene ID: 102017130
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 7264 bases
Position: chrJH721947.1:3808419-3815682
Accession: 102017130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000003408	RNase_H	PF00075.24	2.2e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000003478	RNASEH1-201	1847	XM_005404371	ENSCLAP00000003408	284 (aa)	XP_005404428	UPI00038F07F6

Gene Model

Click here to download ENSCLAG00000002440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000002440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000002440	RNASEH1	100	79.791	ENSG00000171865	RNASEH1	100	79.791	Homo_sapiens
ENSCLAG00000002440	RNASEH1	89	55.263	ENSAPOG00000000412	rnaseh1	88	56.015	Acanthochromis_polyacanthus
ENSCLAG00000002440	RNASEH1	93	81.509	ENSAMEG00000018433	RNASEH1	100	78.397	Ailuropoda_melanoleuca
ENSCLAG00000002440	RNASEH1	89	56.061	ENSACIG00000014666	rnaseh1	86	56.107	Amphilophus_citrinellus
ENSCLAG00000002440	RNASEH1	89	56.391	ENSAOCG00000015210	rnaseh1	88	56.767	Amphiprion_ocellaris
ENSCLAG00000002440	RNASEH1	96	53.767	ENSAPEG00000014104	rnaseh1	96	54.110	Amphiprion_percula
ENSCLAG00000002440	RNASEH1	89	55.639	ENSATEG00000000598	rnaseh1	93	55.639	Anabas_testudineus
ENSCLAG00000002440	RNASEH1	85	60.630	ENSAPLG00000001961	RNASEH1	99	60.630	Anas_platyrhynchos
ENSCLAG00000002440	RNASEH1	90	53.872	ENSACAG00000016857	rnaseh1	92	53.872	Anolis_carolinensis
ENSCLAG00000002440	RNASEH1	100	80.488	ENSANAG00000024055	RNASEH1	100	80.488	Aotus_nancymaae
ENSCLAG00000002440	RNASEH1	89	55.597	ENSACLG00000006741	rnaseh1	87	55.970	Astatotilapia_calliptera
ENSCLAG00000002440	RNASEH1	98	51.613	ENSAMXG00000042940	rnaseh1	97	52.222	Astyanax_mexicanus
ENSCLAG00000002440	RNASEH1	100	77.972	ENSBTAG00000016235	RNASEH1	100	77.972	Bos_taurus
ENSCLAG00000002440	RNASEH1	89	39.921	WBGene00004382	rnh-1.0	95	39.921	Caenorhabditis_elegans
ENSCLAG00000002440	RNASEH1	100	79.038	ENSCJAG00000035450	RNASEH1	100	79.038	Callithrix_jacchus
ENSCLAG00000002440	RNASEH1	100	78.746	ENSCAFG00000003259	RNASEH1	100	78.746	Canis_familiaris
ENSCLAG00000002440	RNASEH1	54	88.312	ENSCAFG00020004994	RNASEH1	99	88.312	Canis_lupus_dingo
ENSCLAG00000002440	RNASEH1	83	67.364	ENSCHIG00000022230	-	100	67.364	Capra_hircus
ENSCLAG00000002440	RNASEH1	100	78.049	ENSCHIG00000022264	-	100	78.049	Capra_hircus
ENSCLAG00000002440	RNASEH1	100	80.769	ENSTSYG00000012926	RNASEH1	99	80.769	Carlito_syrichta
ENSCLAG00000002440	RNASEH1	85	92.116	ENSCAPG00000004813	RNASEH1	99	92.116	Cavia_aperea
ENSCLAG00000002440	RNASEH1	100	90.845	ENSCPOG00000022278	Rnaseh1	97	90.845	Cavia_porcellus
ENSCLAG00000002440	RNASEH1	100	79.038	ENSCCAG00000038017	RNASEH1	100	79.038	Cebus_capucinus
ENSCLAG00000002440	RNASEH1	100	72.378	ENSCATG00000016818	-	100	72.378	Cercocebus_atys
ENSCLAG00000002440	RNASEH1	100	79.094	ENSCATG00000016515	-	100	79.094	Cercocebus_atys
ENSCLAG00000002440	RNASEH1	100	77.320	ENSCSAG00000006943	RNASEH1	100	77.320	Chlorocebus_sabaeus
ENSCLAG00000002440	RNASEH1	71	79.902	ENSCHOG00000008547	RNASEH1	100	79.902	Choloepus_hoffmanni
ENSCLAG00000002440	RNASEH1	89	63.806	ENSCPBG00000021620	RNASEH1	98	63.806	Chrysemys_picta_bellii
ENSCLAG00000002440	RNASEH1	91	38.929	ENSCING00000014054	-	94	38.929	Ciona_intestinalis
ENSCLAG00000002440	RNASEH1	75	39.381	ENSCSAVG00000000009	-	96	39.381	Ciona_savignyi
ENSCLAG00000002440	RNASEH1	100	78.746	ENSCANG00000037763	RNASEH1	100	78.746	Colobus_angolensis_palliatus
ENSCLAG00000002440	RNASEH1	100	78.322	ENSCGRG00001008950	Rnaseh1	100	78.671	Cricetulus_griseus_chok1gshd
ENSCLAG00000002440	RNASEH1	100	78.322	ENSCGRG00000006029	Rnaseh1	100	78.671	Cricetulus_griseus_crigri
ENSCLAG00000002440	RNASEH1	90	51.172	ENSCSEG00000005741	rnaseh1	93	51.493	Cynoglossus_semilaevis
ENSCLAG00000002440	RNASEH1	89	56.818	ENSCVAG00000018717	rnaseh1	87	56.818	Cyprinodon_variegatus
ENSCLAG00000002440	RNASEH1	89	54.717	ENSDARG00000042571	rnaseh1	98	52.766	Danio_rerio
ENSCLAG00000002440	RNASEH1	100	75.347	ENSDNOG00000016056	RNASEH1	100	75.347	Dasypus_novemcinctus
ENSCLAG00000002440	RNASEH1	100	79.720	ENSDORG00000000704	Rnaseh1	100	79.720	Dipodomys_ordii
ENSCLAG00000002440	RNASEH1	89	38.408	FBgn0023171	rnh1	92	38.408	Drosophila_melanogaster
ENSCLAG00000002440	RNASEH1	100	71.777	ENSETEG00000012674	RNASEH1	100	71.777	Echinops_telfairi
ENSCLAG00000002440	RNASEH1	89	47.059	ENSEBUG00000008898	rnaseh1	97	47.059	Eptatretus_burgeri
ENSCLAG00000002440	RNASEH1	89	48.047	ENSEBUG00000006116	rnaseh1	77	47.490	Eptatretus_burgeri
ENSCLAG00000002440	RNASEH1	100	76.655	ENSEASG00005022200	RNASEH1	98	76.655	Equus_asinus_asinus
ENSCLAG00000002440	RNASEH1	100	76.655	ENSECAG00000020695	RNASEH1	98	76.655	Equus_caballus
ENSCLAG00000002440	RNASEH1	95	53.684	ENSELUG00000010112	rnaseh1	95	53.684	Esox_lucius
ENSCLAG00000002440	RNASEH1	100	78.397	ENSFCAG00000025832	RNASEH1	100	78.397	Felis_catus
ENSCLAG00000002440	RNASEH1	99	57.756	ENSFALG00000002069	RNASEH1	99	57.756	Ficedula_albicollis
ENSCLAG00000002440	RNASEH1	100	86.620	ENSFDAG00000002035	RNASEH1	88	86.620	Fukomys_damarensis
ENSCLAG00000002440	RNASEH1	89	54.580	ENSGMOG00000013818	rnaseh1	88	54.580	Gadus_morhua
ENSCLAG00000002440	RNASEH1	98	59.000	ENSGALG00000016389	RNASEH1	98	59.000	Gallus_gallus
ENSCLAG00000002440	RNASEH1	89	55.263	ENSGAFG00000001776	rnaseh1	89	55.263	Gambusia_affinis
ENSCLAG00000002440	RNASEH1	89	54.924	ENSGACG00000011935	rnaseh1	88	54.924	Gasterosteus_aculeatus
ENSCLAG00000002440	RNASEH1	89	62.731	ENSGAGG00000009150	RNASEH1	61	62.731	Gopherus_agassizii
ENSCLAG00000002440	RNASEH1	100	79.094	ENSGGOG00000034822	RNASEH1	100	79.094	Gorilla_gorilla
ENSCLAG00000002440	RNASEH1	89	54.478	ENSHBUG00000004666	rnaseh1	87	55.351	Haplochromis_burtoni
ENSCLAG00000002440	RNASEH1	100	85.211	ENSHGLG00000002585	Rnaseh1	92	85.211	Heterocephalus_glaber_female
ENSCLAG00000002440	RNASEH1	100	85.211	ENSHGLG00100005105	Rnaseh1	92	85.211	Heterocephalus_glaber_male
ENSCLAG00000002440	RNASEH1	90	53.818	ENSHCOG00000012329	rnaseh1	89	54.244	Hippocampus_comes
ENSCLAG00000002440	RNASEH1	89	61.024	ENSIPUG00000023060	rnaseh1	96	61.024	Ictalurus_punctatus
ENSCLAG00000002440	RNASEH1	98	82.562	ENSSTOG00000012774	RNASEH1	100	82.562	Ictidomys_tridecemlineatus
ENSCLAG00000002440	RNASEH1	100	65.845	ENSJJAG00000008994	-	100	65.845	Jaculus_jaculus
ENSCLAG00000002440	RNASEH1	100	72.535	ENSJJAG00000021481	-	100	72.535	Jaculus_jaculus
ENSCLAG00000002440	RNASEH1	90	78.516	ENSJJAG00000020238	Rnaseh1	100	78.516	Jaculus_jaculus
ENSCLAG00000002440	RNASEH1	98	52.297	ENSKMAG00000001373	rnaseh1	96	52.297	Kryptolebias_marmoratus
ENSCLAG00000002440	RNASEH1	98	49.158	ENSLBEG00000004480	rnaseh1	97	52.708	Labrus_bergylta
ENSCLAG00000002440	RNASEH1	91	56.318	ENSLACG00000007100	RNASEH1	89	57.401	Latimeria_chalumnae
ENSCLAG00000002440	RNASEH1	89	56.554	ENSLOCG00000017212	rnaseh1	96	56.554	Lepisosteus_oculatus
ENSCLAG00000002440	RNASEH1	99	76.224	ENSLAFG00000015091	RNASEH1	99	76.224	Loxodonta_africana
ENSCLAG00000002440	RNASEH1	100	79.094	ENSMFAG00000000063	-	100	79.094	Macaca_fascicularis
ENSCLAG00000002440	RNASEH1	100	72.378	ENSMFAG00000002323	-	100	72.378	Macaca_fascicularis
ENSCLAG00000002440	RNASEH1	100	72.028	ENSMMUG00000019280	-	100	72.028	Macaca_mulatta
ENSCLAG00000002440	RNASEH1	100	72.727	ENSMNEG00000029676	-	100	72.727	Macaca_nemestrina
ENSCLAG00000002440	RNASEH1	100	79.443	ENSMNEG00000040183	-	100	79.443	Macaca_nemestrina
ENSCLAG00000002440	RNASEH1	100	75.524	ENSMLEG00000028662	-	100	75.524	Mandrillus_leucophaeus
ENSCLAG00000002440	RNASEH1	85	82.305	ENSMLEG00000039352	-	100	82.305	Mandrillus_leucophaeus
ENSCLAG00000002440	RNASEH1	90	55.970	ENSMAMG00000019725	rnaseh1	94	55.970	Mastacembelus_armatus
ENSCLAG00000002440	RNASEH1	89	55.597	ENSMZEG00005013006	rnaseh1	87	55.970	Maylandia_zebra
ENSCLAG00000002440	RNASEH1	79	58.871	ENSMGAG00000013979	RNASEH1	98	58.871	Meleagris_gallopavo
ENSCLAG00000002440	RNASEH1	99	78.596	ENSMAUG00000014957	Rnaseh1	99	78.596	Mesocricetus_auratus
ENSCLAG00000002440	RNASEH1	99	83.392	ENSMICG00000033156	RNASEH1	98	83.392	Microcebus_murinus
ENSCLAG00000002440	RNASEH1	100	75.779	ENSMOCG00000015522	Rnaseh1	100	75.779	Microtus_ochrogaster
ENSCLAG00000002440	RNASEH1	89	53.992	ENSMMOG00000015902	rnaseh1	87	53.992	Mola_mola
ENSCLAG00000002440	RNASEH1	80	62.445	ENSMODG00000028814	-	93	62.445	Monodelphis_domestica
ENSCLAG00000002440	RNASEH1	91	73.282	ENSMODG00000014491	-	90	73.282	Monodelphis_domestica
ENSCLAG00000002440	RNASEH1	98	51.864	ENSMALG00000010565	rnaseh1	97	51.864	Monopterus_albus
ENSCLAG00000002440	RNASEH1	100	79.720	MGP_CAROLIEiJ_G0017660	Rnaseh1	100	79.720	Mus_caroli
ENSCLAG00000002440	RNASEH1	100	79.720	ENSMUSG00000020630	Rnaseh1	100	79.720	Mus_musculus
ENSCLAG00000002440	RNASEH1	99	78.596	MGP_PahariEiJ_G0029418	Rnaseh1	99	79.298	Mus_pahari
ENSCLAG00000002440	RNASEH1	100	80.070	MGP_SPRETEiJ_G0018502	Rnaseh1	100	80.070	Mus_spretus
ENSCLAG00000002440	RNASEH1	71	79.104	ENSMPUG00000012984	RNASEH1	97	79.104	Mustela_putorius_furo
ENSCLAG00000002440	RNASEH1	98	81.560	ENSNGAG00000015966	Rnaseh1	92	81.560	Nannospalax_galili
ENSCLAG00000002440	RNASEH1	89	55.970	ENSNBRG00000008739	rnaseh1	93	53.472	Neolamprologus_brichardi
ENSCLAG00000002440	RNASEH1	82	74.576	ENSNLEG00000000059	-	88	74.576	Nomascus_leucogenys
ENSCLAG00000002440	RNASEH1	100	65.972	ENSNLEG00000015400	RNASEH1	100	65.972	Nomascus_leucogenys
ENSCLAG00000002440	RNASEH1	96	49.097	ENSMEUG00000003610	-	97	49.097	Notamacropus_eugenii
ENSCLAG00000002440	RNASEH1	100	75.261	ENSOPRG00000005072	RNASEH1	99	75.261	Ochotona_princeps
ENSCLAG00000002440	RNASEH1	100	90.141	ENSODEG00000000235	Rnaseh1	97	90.141	Octodon_degus
ENSCLAG00000002440	RNASEH1	89	55.970	ENSONIG00000018697	rnaseh1	96	55.970	Oreochromis_niloticus
ENSCLAG00000002440	RNASEH1	100	78.322	ENSOCUG00000006117	RNASEH1	100	78.746	Oryctolagus_cuniculus
ENSCLAG00000002440	RNASEH1	89	57.414	ENSORLG00000018127	rnaseh1	94	57.414	Oryzias_latipes
ENSCLAG00000002440	RNASEH1	98	54.861	ENSORLG00020013660	rnaseh1	94	54.861	Oryzias_latipes_hni
ENSCLAG00000002440	RNASEH1	98	54.861	ENSORLG00015011338	rnaseh1	94	54.861	Oryzias_latipes_hsok
ENSCLAG00000002440	RNASEH1	81	55.319	ENSOMEG00000004710	rnaseh1	90	55.319	Oryzias_melastigma
ENSCLAG00000002440	RNASEH1	99	81.690	ENSOGAG00000017176	RNASEH1	99	81.690	Otolemur_garnettii
ENSCLAG00000002440	RNASEH1	100	67.918	ENSOARG00000005386	RNASEH1	100	67.918	Ovis_aries
ENSCLAG00000002440	RNASEH1	100	79.791	ENSPPAG00000034221	RNASEH1	100	79.791	Pan_paniscus
ENSCLAG00000002440	RNASEH1	100	78.397	ENSPPRG00000015513	RNASEH1	100	78.397	Panthera_pardus
ENSCLAG00000002440	RNASEH1	85	81.893	ENSPTIG00000019034	RNASEH1	85	81.893	Panthera_tigris_altaica
ENSCLAG00000002440	RNASEH1	100	79.791	ENSPTRG00000011614	RNASEH1	100	79.791	Pan_troglodytes
ENSCLAG00000002440	RNASEH1	88	72.481	ENSPTRG00000043403	-	97	72.481	Pan_troglodytes
ENSCLAG00000002440	RNASEH1	100	69.580	ENSPANG00000018246	-	100	69.580	Papio_anubis
ENSCLAG00000002440	RNASEH1	100	79.443	ENSPANG00000000443	RNASEH1	99	82.377	Papio_anubis
ENSCLAG00000002440	RNASEH1	89	51.685	ENSPKIG00000003146	rnaseh1	97	52.045	Paramormyrops_kingsleyae
ENSCLAG00000002440	RNASEH1	89	62.547	ENSPSIG00000002937	RNASEH1	98	62.547	Pelodiscus_sinensis
ENSCLAG00000002440	RNASEH1	89	54.826	ENSPMGG00000017463	rnaseh1	90	54.826	Periophthalmus_magnuspinnatus
ENSCLAG00000002440	RNASEH1	100	77.003	ENSPEMG00000022465	-	100	77.700	Peromyscus_maniculatus_bairdii
ENSCLAG00000002440	RNASEH1	91	70.611	ENSPCIG00000023334	-	90	70.611	Phascolarctos_cinereus
ENSCLAG00000002440	RNASEH1	52	43.624	ENSPCIG00000026047	-	83	44.218	Phascolarctos_cinereus
ENSCLAG00000002440	RNASEH1	89	57.519	ENSPFOG00000002841	rnaseh1	89	57.519	Poecilia_formosa
ENSCLAG00000002440	RNASEH1	64	50.000	ENSPLAG00000021349	-	74	50.000	Poecilia_latipinna
ENSCLAG00000002440	RNASEH1	89	57.143	ENSPMEG00000016826	rnaseh1	89	57.143	Poecilia_mexicana
ENSCLAG00000002440	RNASEH1	89	55.185	ENSPREG00000012197	rnaseh1	89	55.185	Poecilia_reticulata
ENSCLAG00000002440	RNASEH1	100	68.966	ENSPPYG00000025873	RNASEH1	100	68.966	Pongo_abelii
ENSCLAG00000002440	RNASEH1	91	74.427	ENSPPYG00000008067	-	100	74.427	Pongo_abelii
ENSCLAG00000002440	RNASEH1	99	74.296	ENSPCAG00000002500	RNASEH1	99	74.296	Procavia_capensis
ENSCLAG00000002440	RNASEH1	99	74.558	ENSPCOG00000019444	RNASEH1	98	74.558	Propithecus_coquereli
ENSCLAG00000002440	RNASEH1	99	76.140	ENSPVAG00000002070	RNASEH1	99	76.140	Pteropus_vampyrus
ENSCLAG00000002440	RNASEH1	89	55.224	ENSPNYG00000001292	rnaseh1	87	55.597	Pundamilia_nyererei
ENSCLAG00000002440	RNASEH1	90	58.846	ENSPNAG00000022344	rnaseh1	90	58.846	Pygocentrus_nattereri
ENSCLAG00000002440	RNASEH1	99	78.947	ENSRNOG00000008584	Rnaseh1	99	79.649	Rattus_norvegicus
ENSCLAG00000002440	RNASEH1	100	79.094	ENSRBIG00000034222	RNASEH1	99	79.094	Rhinopithecus_bieti
ENSCLAG00000002440	RNASEH1	100	79.094	ENSRROG00000041761	RNASEH1	99	79.094	Rhinopithecus_roxellana
ENSCLAG00000002440	RNASEH1	90	51.020	YMR234W	-	99	35.455	Saccharomyces_cerevisiae
ENSCLAG00000002440	RNASEH1	100	78.351	ENSSBOG00000025411	RNASEH1	100	78.351	Saimiri_boliviensis_boliviensis
ENSCLAG00000002440	RNASEH1	99	68.966	ENSSHAG00000013051	RNASEH1	99	68.966	Sarcophilus_harrisii
ENSCLAG00000002440	RNASEH1	90	50.909	ENSSFOG00015002709	rnaseh1	91	50.909	Scleropages_formosus
ENSCLAG00000002440	RNASEH1	89	55.639	ENSSMAG00000007586	rnaseh1	87	56.015	Scophthalmus_maximus
ENSCLAG00000002440	RNASEH1	89	53.585	ENSSDUG00000008217	rnaseh1	93	53.585	Seriola_dumerili
ENSCLAG00000002440	RNASEH1	87	53.668	ENSSLDG00000000442	rnaseh1	93	55.422	Seriola_lalandi_dorsalis
ENSCLAG00000002440	RNASEH1	89	60.741	ENSSPUG00000006644	RNASEH1	92	60.741	Sphenodon_punctatus
ENSCLAG00000002440	RNASEH1	89	56.226	ENSSPAG00000009353	rnaseh1	87	56.604	Stegastes_partitus
ENSCLAG00000002440	RNASEH1	93	79.026	ENSSSCG00000025305	RNASEH1	99	76.056	Sus_scrofa
ENSCLAG00000002440	RNASEH1	99	55.049	ENSTGUG00000012980	RNASEH1	99	56.352	Taeniopygia_guttata
ENSCLAG00000002440	RNASEH1	98	51.864	ENSTRUG00000015774	rnaseh1	96	53.114	Takifugu_rubripes
ENSCLAG00000002440	RNASEH1	90	57.090	ENSTNIG00000010715	rnaseh1	96	57.090	Tetraodon_nigroviridis
ENSCLAG00000002440	RNASEH1	100	73.171	ENSTTRG00000001615	RNASEH1	100	73.171	Tursiops_truncatus
ENSCLAG00000002440	RNASEH1	54	88.312	ENSUAMG00000018254	RNASEH1	80	88.312	Ursus_americanus
ENSCLAG00000002440	RNASEH1	69	78.173	ENSUMAG00000003941	RNASEH1	65	78.173	Ursus_maritimus
ENSCLAG00000002440	RNASEH1	100	66.084	ENSVPAG00000011589	RNASEH1	100	66.084	Vicugna_pacos
ENSCLAG00000002440	RNASEH1	100	79.791	ENSVVUG00000008633	RNASEH1	90	79.791	Vulpes_vulpes
ENSCLAG00000002440	RNASEH1	90	45.490	ENSXETG00000030371	-	100	45.490	Xenopus_tropicalis
ENSCLAG00000002440	RNASEH1	90	55.431	ENSXETG00000001212	rnaseh1	91	56.554	Xenopus_tropicalis
ENSCLAG00000002440	RNASEH1	89	54.135	ENSXMAG00000002357	rnaseh1	89	54.135	Xiphophorus_maculatus