EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000002727 (Gene tree)
Gene ID
102023041
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Plus strand
Length
23537 bases
Position
chrJH721947.1:5146541-5170077
Accession
102023041
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000003832CPSF73-100_CPF11718.87.5e-5511
ENSCLAP00000003832Beta-CaspPF10996.84.6e-3411
ENSCLAP00000003832Lactamase_BPF00753.271e-1811
ENSCLAP00000003832RMMBLPF07521.121e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000003908CPSF3-2012515XM_005404394ENSCLAP00000003832684 (aa)XP_005404451UPI00038EE804
Gene Model
Click here to download ENSCLAG00000002727's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000002727's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000002727CPSF37137.747ENSCLAG00000004586INTS118237.747
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000002727CPSF310097.515ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCLAG00000002727CPSF39985.714ENSAPOG00000022087cpsf39885.714Acanthochromis_polyacanthus
ENSCLAG00000002727CPSF37396.794ENSAPOG00000012241CPSF39096.781Acanthochromis_polyacanthus
ENSCLAG00000002727CPSF310097.807ENSAMEG00000008493CPSF310097.807Ailuropoda_melanoleuca
ENSCLAG00000002727CPSF39286.667ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSCLAG00000002727CPSF39283.599ENSACIG00000009846cpsf39983.599Amphilophus_citrinellus
ENSCLAG00000002727CPSF39985.862ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSCLAG00000002727CPSF39987.941ENSAOCG00000010077CPSF39887.941Amphiprion_ocellaris
ENSCLAG00000002727CPSF39987.941ENSAPEG00000021167CPSF39887.941Amphiprion_percula
ENSCLAG00000002727CPSF39986.009ENSAPEG00000019526cpsf39886.009Amphiprion_percula
ENSCLAG00000002727CPSF39986.009ENSATEG00000003959cpsf39886.009Anabas_testudineus
ENSCLAG00000002727CPSF39983.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSCLAG00000002727CPSF39894.196ENSAPLG00000006941CPSF39894.196Anas_platyrhynchos
ENSCLAG00000002727CPSF39392.126ENSACAG00000001759CPSF39992.126Anolis_carolinensis
ENSCLAG00000002727CPSF310091.082ENSANAG00000031254CPSF310091.082Aotus_nancymaae
ENSCLAG00000002727CPSF39786.015ENSACLG00000014484cpsf39986.015Astatotilapia_calliptera
ENSCLAG00000002727CPSF39286.349ENSACLG00000018846CPSF39986.349Astatotilapia_calliptera
ENSCLAG00000002727CPSF39987.647ENSAMXG00000004786cpsf39887.647Astyanax_mexicanus
ENSCLAG00000002727CPSF310097.661ENSBTAG00000019735CPSF310097.661Bos_taurus
ENSCLAG00000002727CPSF39159.055WBGene00013460cpsf-38959.055Caenorhabditis_elegans
ENSCLAG00000002727CPSF310097.368ENSCJAG00000006276CPSF310097.368Callithrix_jacchus
ENSCLAG00000002727CPSF310097.807ENSCAFG00000003375CPSF39597.807Canis_familiaris
ENSCLAG00000002727CPSF39098.061ENSCAFG00020026799CPSF310098.061Canis_lupus_dingo
ENSCLAG00000002727CPSF310097.661ENSCHIG00000013973CPSF310097.661Capra_hircus
ENSCLAG00000002727CPSF310097.368ENSTSYG00000002967CPSF310097.368Carlito_syrichta
ENSCLAG00000002727CPSF39899.250ENSCAPG00000013851CPSF310099.250Cavia_aperea
ENSCLAG00000002727CPSF310099.123ENSCPOG00000011299CPSF310099.123Cavia_porcellus
ENSCLAG00000002727CPSF310097.222ENSCCAG00000036730CPSF310097.222Cebus_capucinus
ENSCLAG00000002727CPSF310094.745ENSCATG00000014770CPSF39999.139Cercocebus_atys
ENSCLAG00000002727CPSF310089.620ENSCSAG00000007125CPSF310089.620Chlorocebus_sabaeus
ENSCLAG00000002727CPSF386100.000ENSCHOG00000000180CPSF38570.877Choloepus_hoffmanni
ENSCLAG00000002727CPSF39994.428ENSCPBG00000014074CPSF39994.428Chrysemys_picta_bellii
ENSCLAG00000002727CPSF39967.445ENSCING00000007214-9867.445Ciona_intestinalis
ENSCLAG00000002727CPSF310085.380ENSCANG00000034435CPSF310085.380Colobus_angolensis_palliatus
ENSCLAG00000002727CPSF310097.368ENSCGRG00001013134Cpsf310097.368Cricetulus_griseus_chok1gshd
ENSCLAG00000002727CPSF310097.368ENSCGRG00000018319Cpsf310097.368Cricetulus_griseus_crigri
ENSCLAG00000002727CPSF39987.078ENSCSEG00000002021CPSF39986.862Cynoglossus_semilaevis
ENSCLAG00000002727CPSF39988.235ENSCVAG00000015067CPSF39888.235Cyprinodon_variegatus
ENSCLAG00000002727CPSF39987.941ENSDARG00000027649cpsf39887.941Danio_rerio
ENSCLAG00000002727CPSF310096.204ENSDNOG00000008940CPSF39596.204Dasypus_novemcinctus
ENSCLAG00000002727CPSF39597.389ENSDORG00000014263Cpsf310097.389Dipodomys_ordii
ENSCLAG00000002727CPSF39967.158FBgn0261065Cpsf739867.158Drosophila_melanogaster
ENSCLAG00000002727CPSF39583.871ENSETEG00000003893CPSF310083.871Echinops_telfairi
ENSCLAG00000002727CPSF39978.367ENSEBUG00000009018cpsf39878.510Eptatretus_burgeri
ENSCLAG00000002727CPSF310097.807ENSEASG00005003970CPSF310097.807Equus_asinus_asinus
ENSCLAG00000002727CPSF310097.807ENSECAG00000019911CPSF310097.807Equus_caballus
ENSCLAG00000002727CPSF310082.018ENSEEUG00000015422CPSF310082.018Erinaceus_europaeus
ENSCLAG00000002727CPSF39987.941ENSELUG00000013775cpsf39887.941Esox_lucius
ENSCLAG00000002727CPSF310097.661ENSFCAG00000007852CPSF310097.661Felis_catus
ENSCLAG00000002727CPSF39593.972ENSFALG00000006572CPSF310093.972Ficedula_albicollis
ENSCLAG00000002727CPSF39998.240ENSFDAG00000006317CPSF39998.240Fukomys_damarensis
ENSCLAG00000002727CPSF35969.512ENSFHEG00000012186CPSF39969.512Fundulus_heteroclitus
ENSCLAG00000002727CPSF39985.420ENSFHEG00000014774cpsf39885.420Fundulus_heteroclitus
ENSCLAG00000002727CPSF39986.912ENSGMOG00000003157cpsf39886.912Gadus_morhua
ENSCLAG00000002727CPSF39993.979ENSGALG00000016424CPSF39993.979Gallus_gallus
ENSCLAG00000002727CPSF39282.353ENSGAFG00000019449cpsf39982.353Gambusia_affinis
ENSCLAG00000002727CPSF39988.218ENSGAFG00000008016CPSF39888.218Gambusia_affinis
ENSCLAG00000002727CPSF36892.077ENSGAGG00000025583CPSF39392.077Gopherus_agassizii
ENSCLAG00000002727CPSF310095.136ENSGGOG00000001757CPSF310097.323Gorilla_gorilla
ENSCLAG00000002727CPSF39985.903ENSHBUG00000001188cpsf39985.903Haplochromis_burtoni
ENSCLAG00000002727CPSF35981.235ENSHBUG00000014332CPSF39981.235Haplochromis_burtoni
ENSCLAG00000002727CPSF310098.246ENSHGLG00000000666CPSF39998.246Heterocephalus_glaber_female
ENSCLAG00000002727CPSF310098.246ENSHGLG00100007765CPSF39998.246Heterocephalus_glaber_male
ENSCLAG00000002727CPSF39986.176ENSHCOG00000015957CPSF39786.176Hippocampus_comes
ENSCLAG00000002727CPSF39985.484ENSHCOG00000007251cpsf39985.484Hippocampus_comes
ENSCLAG00000002727CPSF39986.912ENSIPUG00000023488cpsf39886.912Ictalurus_punctatus
ENSCLAG00000002727CPSF310097.222ENSSTOG00000004476CPSF310097.222Ictidomys_tridecemlineatus
ENSCLAG00000002727CPSF310096.199ENSJJAG00000023415Cpsf310096.199Jaculus_jaculus
ENSCLAG00000002727CPSF39987.941ENSKMAG00000007317CPSF39887.941Kryptolebias_marmoratus
ENSCLAG00000002727CPSF39985.125ENSKMAG00000002806cpsf39885.125Kryptolebias_marmoratus
ENSCLAG00000002727CPSF39979.559ENSLBEG00000020569cpsf39479.559Labrus_bergylta
ENSCLAG00000002727CPSF35580.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSCLAG00000002727CPSF39588.735ENSLBEG00000013492CPSF39888.735Labrus_bergylta
ENSCLAG00000002727CPSF39983.063ENSLACG00000008308CPSF39883.063Latimeria_chalumnae
ENSCLAG00000002727CPSF39988.546ENSLOCG00000016823cpsf39888.546Lepisosteus_oculatus
ENSCLAG00000002727CPSF39995.882ENSLAFG00000009467CPSF310095.882Loxodonta_africana
ENSCLAG00000002727CPSF310097.368ENSMFAG00000001339CPSF310097.368Macaca_fascicularis
ENSCLAG00000002727CPSF39597.218ENSMMUG00000018038CPSF310097.218Macaca_mulatta
ENSCLAG00000002727CPSF310084.649ENSMNEG00000039447CPSF310084.649Macaca_nemestrina
ENSCLAG00000002727CPSF310097.515ENSMLEG00000026825CPSF310097.515Mandrillus_leucophaeus
ENSCLAG00000002727CPSF39985.714ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSCLAG00000002727CPSF39285.285ENSMAMG00000008835CPSF39985.285Mastacembelus_armatus
ENSCLAG00000002727CPSF39988.529ENSMZEG00005006258CPSF39888.529Maylandia_zebra
ENSCLAG00000002727CPSF39985.903ENSMZEG00005014358cpsf39985.903Maylandia_zebra
ENSCLAG00000002727CPSF39893.853ENSMGAG00000013995CPSF310093.853Meleagris_gallopavo
ENSCLAG00000002727CPSF35594.149ENSMAUG00000000166Cpsf310094.149Mesocricetus_auratus
ENSCLAG00000002727CPSF310092.398ENSMICG00000002363CPSF310092.398Microcebus_murinus
ENSCLAG00000002727CPSF310092.836ENSMOCG00000020067Cpsf310092.836Microtus_ochrogaster
ENSCLAG00000002727CPSF39482.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSCLAG00000002727CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCLAG00000002727CPSF310095.224ENSMODG00000014703CPSF310095.224Monodelphis_domestica
ENSCLAG00000002727CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSCLAG00000002727CPSF39383.125ENSMALG00000011474CPSF39983.125Monopterus_albus
ENSCLAG00000002727CPSF310097.076MGP_CAROLIEiJ_G0017640Cpsf310097.076Mus_caroli
ENSCLAG00000002727CPSF310097.076ENSMUSG00000054309Cpsf310097.076Mus_musculus
ENSCLAG00000002727CPSF310096.930MGP_PahariEiJ_G0029397Cpsf310096.930Mus_pahari
ENSCLAG00000002727CPSF310097.076MGP_SPRETEiJ_G0018481Cpsf310097.076Mus_spretus
ENSCLAG00000002727CPSF310097.222ENSMPUG00000013213CPSF310097.222Mustela_putorius_furo
ENSCLAG00000002727CPSF310096.934ENSMLUG00000010636CPSF310096.934Myotis_lucifugus
ENSCLAG00000002727CPSF310097.076ENSNGAG00000019836Cpsf310097.076Nannospalax_galili
ENSCLAG00000002727CPSF39286.349ENSNBRG00000010525CPSF39986.349Neolamprologus_brichardi
ENSCLAG00000002727CPSF39985.463ENSNBRG00000004770cpsf39985.463Neolamprologus_brichardi
ENSCLAG00000002727CPSF310097.368ENSNLEG00000013359CPSF310097.368Nomascus_leucogenys
ENSCLAG00000002727CPSF310064.181ENSMEUG00000013117-10064.181Notamacropus_eugenii
ENSCLAG00000002727CPSF310088.304ENSOPRG00000008902CPSF310088.304Ochotona_princeps
ENSCLAG00000002727CPSF310099.123ENSODEG00000003129CPSF310099.123Octodon_degus
ENSCLAG00000002727CPSF39986.197ENSONIG00000018812cpsf39986.197Oreochromis_niloticus
ENSCLAG00000002727CPSF38294.858ENSOANG00000008577CPSF310094.858Ornithorhynchus_anatinus
ENSCLAG00000002727CPSF310097.222ENSOCUG00000003728CPSF310097.222Oryctolagus_cuniculus
ENSCLAG00000002727CPSF39983.700ENSORLG00000018854cpsf39983.700Oryzias_latipes
ENSCLAG00000002727CPSF39983.847ENSORLG00020013331cpsf39983.847Oryzias_latipes_hni
ENSCLAG00000002727CPSF39983.700ENSORLG00015011017cpsf39983.700Oryzias_latipes_hsok
ENSCLAG00000002727CPSF39983.847ENSOMEG00000010647cpsf39483.847Oryzias_melastigma
ENSCLAG00000002727CPSF310087.573ENSOGAG00000001680CPSF310087.573Otolemur_garnettii
ENSCLAG00000002727CPSF310097.661ENSOARG00000015073CPSF310097.661Ovis_aries
ENSCLAG00000002727CPSF310097.515ENSPPAG00000042457CPSF310097.515Pan_paniscus
ENSCLAG00000002727CPSF310097.368ENSPPRG00000016790CPSF310097.368Panthera_pardus
ENSCLAG00000002727CPSF39997.353ENSPTIG00000003920CPSF310097.165Panthera_tigris_altaica
ENSCLAG00000002727CPSF310097.515ENSPTRG00000011638CPSF310097.515Pan_troglodytes
ENSCLAG00000002727CPSF310097.222ENSPANG00000016798CPSF310097.222Papio_anubis
ENSCLAG00000002727CPSF39989.412ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSCLAG00000002727CPSF39993.265ENSPSIG00000016144CPSF310093.265Pelodiscus_sinensis
ENSCLAG00000002727CPSF38385.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSCLAG00000002727CPSF35979.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSCLAG00000002727CPSF310096.930ENSPEMG00000017668Cpsf310096.930Peromyscus_maniculatus_bairdii
ENSCLAG00000002727CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSCLAG00000002727CPSF39896.252ENSPCIG00000009823CPSF39896.472Phascolarctos_cinereus
ENSCLAG00000002727CPSF39988.071ENSPFOG00000010418-9888.071Poecilia_formosa
ENSCLAG00000002727CPSF39984.457ENSPFOG00000015922cpsf39984.457Poecilia_formosa
ENSCLAG00000002727CPSF39984.457ENSPLAG00000000882cpsf39984.457Poecilia_latipinna
ENSCLAG00000002727CPSF35981.188ENSPLAG00000021300-9981.188Poecilia_latipinna
ENSCLAG00000002727CPSF39984.604ENSPMEG00000018309cpsf39984.604Poecilia_mexicana
ENSCLAG00000002727CPSF39282.512ENSPREG00000014875cpsf39982.512Poecilia_reticulata
ENSCLAG00000002727CPSF39983.063ENSPREG00000004482CPSF39883.063Poecilia_reticulata
ENSCLAG00000002727CPSF310092.982ENSPPYG00000012666CPSF310092.982Pongo_abelii
ENSCLAG00000002727CPSF39562.980ENSPCAG00000015042CPSF310062.980Procavia_capensis
ENSCLAG00000002727CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSCLAG00000002727CPSF39997.507ENSPVAG00000005324CPSF39997.507Pteropus_vampyrus
ENSCLAG00000002727CPSF39985.903ENSPNYG00000004405cpsf39985.903Pundamilia_nyererei
ENSCLAG00000002727CPSF37991.513ENSPNYG00000021047CPSF39091.513Pundamilia_nyererei
ENSCLAG00000002727CPSF39987.647ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSCLAG00000002727CPSF39997.067ENSRNOG00000052418Cpsf39997.067Rattus_norvegicus
ENSCLAG00000002727CPSF310091.520ENSRBIG00000041615CPSF39992.736Rhinopithecus_bieti
ENSCLAG00000002727CPSF310097.515ENSRROG00000033792CPSF310097.515Rhinopithecus_roxellana
ENSCLAG00000002727CPSF39340.403YLR277CYSH19540.403Saccharomyces_cerevisiae
ENSCLAG00000002727CPSF310091.159ENSSBOG00000027263CPSF310091.159Saimiri_boliviensis_boliviensis
ENSCLAG00000002727CPSF310096.491ENSSHAG00000007024CPSF310096.491Sarcophilus_harrisii
ENSCLAG00000002727CPSF39989.280ENSSFOG00015002108cpsf39989.280Scleropages_formosus
ENSCLAG00000002727CPSF39587.519ENSSMAG00000020534CPSF39587.519Scophthalmus_maximus
ENSCLAG00000002727CPSF39988.235ENSSDUG00000018498CPSF39888.235Seriola_dumerili
ENSCLAG00000002727CPSF39986.197ENSSDUG00000002828cpsf39686.197Seriola_dumerili
ENSCLAG00000002727CPSF39986.197ENSSLDG00000008469cpsf39686.197Seriola_lalandi_dorsalis
ENSCLAG00000002727CPSF39988.235ENSSLDG00000005234CPSF39888.235Seriola_lalandi_dorsalis
ENSCLAG00000002727CPSF310079.971ENSSARG00000005186CPSF310079.971Sorex_araneus
ENSCLAG00000002727CPSF39891.505ENSSPUG00000015525CPSF39791.505Sphenodon_punctatus
ENSCLAG00000002727CPSF39987.941ENSSPAG00000002906CPSF39887.941Stegastes_partitus
ENSCLAG00000002727CPSF39986.009ENSSPAG00000018579cpsf39886.009Stegastes_partitus
ENSCLAG00000002727CPSF39997.950ENSSSCG00000020799CPSF39997.950Sus_scrofa
ENSCLAG00000002727CPSF39994.126ENSTGUG00000013016CPSF39994.126Taeniopygia_guttata
ENSCLAG00000002727CPSF35972.482ENSTRUG00000013905CPSF39972.482Takifugu_rubripes
ENSCLAG00000002727CPSF39985.294ENSTRUG00000007030cpsf39785.294Takifugu_rubripes
ENSCLAG00000002727CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSCLAG00000002727CPSF38891.935ENSTTRG00000000861CPSF38891.935Tursiops_truncatus
ENSCLAG00000002727CPSF39697.869ENSUAMG00000007535CPSF39497.869Ursus_americanus
ENSCLAG00000002727CPSF39597.682ENSUMAG00000003676CPSF310097.682Ursus_maritimus
ENSCLAG00000002727CPSF39395.110ENSVPAG00000008041CPSF310095.110Vicugna_pacos
ENSCLAG00000002727CPSF310097.807ENSVVUG00000002194CPSF310097.807Vulpes_vulpes
ENSCLAG00000002727CPSF39989.721ENSXETG00000008263cpsf39889.721Xenopus_tropicalis
ENSCLAG00000002727CPSF35479.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSCLAG00000002727CPSF39984.457ENSXCOG00000019695cpsf39984.457Xiphophorus_couchianus
ENSCLAG00000002727CPSF39984.457ENSXMAG00000009784cpsf39984.457Xiphophorus_maculatus
ENSCLAG00000002727CPSF39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus

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