EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000002889 (Gene tree)
Gene ID: 102021820
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 17944 bases
Position: chrJH722043.1:848481-866424
Accession: 102021820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004046	tRNA-synt_1g	PF09334.11	1.7e-13	1	1
ENSCLAP00000004046	Anticodon_1	PF08264.13	1.4e-28	1	1
ENSCLAP00000004046	tRNA-synt_1	PF00133.22	1.3e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004127	VARS2-201	7516	XM_005414326	ENSCLAP00000004046	1063 (aa)	XP_005414383	UPI00038EE512

Gene Model

Click here to download ENSCLAG00000002889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000002889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000002889	VARS2	91	51.083	ENSCLAG00000009470	VARS	81	51.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000002889	VARS2	92	51.677	ENSAPOG00000007396	vars2	99	50.000	Acanthochromis_polyacanthus
ENSCLAG00000002889	VARS2	99	83.522	ENSAMEG00000012997	VARS2	97	83.522	Ailuropoda_melanoleuca
ENSCLAG00000002889	VARS2	93	52.673	ENSACIG00000004344	vars2	94	52.475	Amphilophus_citrinellus
ENSCLAG00000002889	VARS2	92	51.677	ENSAOCG00000000476	vars2	99	50.093	Amphiprion_ocellaris
ENSCLAG00000002889	VARS2	92	51.530	ENSAPEG00000008646	vars2	96	49.954	Amphiprion_percula
ENSCLAG00000002889	VARS2	91	52.971	ENSATEG00000012291	vars2	96	51.688	Anabas_testudineus
ENSCLAG00000002889	VARS2	97	57.890	ENSACAG00000022093	VARS2	97	57.890	Anolis_carolinensis
ENSCLAG00000002889	VARS2	99	83.977	ENSANAG00000038018	VARS2	99	83.977	Aotus_nancymaae
ENSCLAG00000002889	VARS2	99	51.256	ENSACLG00000018673	vars2	98	51.256	Astatotilapia_calliptera
ENSCLAG00000002889	VARS2	95	52.290	ENSAMXG00000017773	vars2	96	53.854	Astyanax_mexicanus
ENSCLAG00000002889	VARS2	99	84.754	ENSBTAG00000010698	VARS2	99	84.731	Bos_taurus
ENSCLAG00000002889	VARS2	99	83.695	ENSCJAG00000019826	VARS2	99	83.695	Callithrix_jacchus
ENSCLAG00000002889	VARS2	99	81.485	ENSCAFG00000000454	VARS2	99	81.485	Canis_familiaris
ENSCLAG00000002889	VARS2	87	82.454	ENSCAFG00020019387	VARS2	95	82.403	Canis_lupus_dingo
ENSCLAG00000002889	VARS2	99	84.929	ENSCHIG00000007847	VARS2	99	84.920	Capra_hircus
ENSCLAG00000002889	VARS2	99	83.035	ENSTSYG00000009904	VARS2	99	83.035	Carlito_syrichta
ENSCLAG00000002889	VARS2	88	89.186	ENSCAPG00000017770	VARS2	100	89.186	Cavia_aperea
ENSCLAG00000002889	VARS2	100	89.014	ENSCPOG00000021834	VARS2	100	89.014	Cavia_porcellus
ENSCLAG00000002889	VARS2	99	84.354	ENSCCAG00000037907	VARS2	99	84.354	Cebus_capucinus
ENSCLAG00000002889	VARS2	99	84.920	ENSCATG00000032554	VARS2	99	84.920	Cercocebus_atys
ENSCLAG00000002889	VARS2	99	84.449	ENSCSAG00000008327	VARS2	99	84.449	Chlorocebus_sabaeus
ENSCLAG00000002889	VARS2	90	62.552	ENSCPBG00000021502	VARS2	95	62.343	Chrysemys_picta_bellii
ENSCLAG00000002889	VARS2	99	84.543	ENSCANG00000014991	VARS2	99	84.543	Colobus_angolensis_palliatus
ENSCLAG00000002889	VARS2	98	81.478	ENSCGRG00001021535	Vars2	99	81.209	Cricetulus_griseus_chok1gshd
ENSCLAG00000002889	VARS2	98	81.478	ENSCGRG00000014112	Vars2	99	81.209	Cricetulus_griseus_crigri
ENSCLAG00000002889	VARS2	83	57.111	ENSCSEG00000015432	vars2	84	67.333	Cynoglossus_semilaevis
ENSCLAG00000002889	VARS2	63	52.577	ENSCVAG00000017765	vars2	94	52.577	Cyprinodon_variegatus
ENSCLAG00000002889	VARS2	94	52.221	ENSDARG00000056717	vars2	94	52.221	Danio_rerio
ENSCLAG00000002889	VARS2	79	84.405	ENSDORG00000008516	Vars2	93	84.405	Dipodomys_ordii
ENSCLAG00000002889	VARS2	99	74.081	ENSETEG00000014844	VARS2	99	74.081	Echinops_telfairi
ENSCLAG00000002889	VARS2	99	84.652	ENSEASG00005019997	VARS2	97	84.652	Equus_asinus_asinus
ENSCLAG00000002889	VARS2	99	85.782	ENSECAG00000018202	VARS2	99	85.782	Equus_caballus
ENSCLAG00000002889	VARS2	62	78.641	ENSEEUG00000012591	-	62	78.641	Erinaceus_europaeus
ENSCLAG00000002889	VARS2	93	51.938	ENSELUG00000017824	vars2	97	51.354	Esox_lucius
ENSCLAG00000002889	VARS2	99	82.957	ENSFCAG00000010531	VARS2	99	82.957	Felis_catus
ENSCLAG00000002889	VARS2	100	87.770	ENSFDAG00000017216	VARS2	100	87.770	Fukomys_damarensis
ENSCLAG00000002889	VARS2	86	52.000	ENSFHEG00000013932	vars2	96	50.613	Fundulus_heteroclitus
ENSCLAG00000002889	VARS2	89	55.299	ENSGMOG00000018960	vars2	99	55.299	Gadus_morhua
ENSCLAG00000002889	VARS2	85	48.743	ENSGAFG00000004737	vars2	92	48.743	Gambusia_affinis
ENSCLAG00000002889	VARS2	91	54.150	ENSGACG00000001464	vars2	99	54.150	Gasterosteus_aculeatus
ENSCLAG00000002889	VARS2	91	60.768	ENSGAGG00000011652	VARS2	99	60.768	Gopherus_agassizii
ENSCLAG00000002889	VARS2	99	84.543	ENSGGOG00000014587	VARS2	99	84.543	Gorilla_gorilla
ENSCLAG00000002889	VARS2	91	52.541	ENSHBUG00000002448	vars2	93	52.541	Haplochromis_burtoni
ENSCLAG00000002889	VARS2	100	87.112	ENSHGLG00000012886	VARS2	96	87.112	Heterocephalus_glaber_female
ENSCLAG00000002889	VARS2	100	86.924	ENSHGLG00100016535	VARS2	100	86.924	Heterocephalus_glaber_male
ENSCLAG00000002889	VARS2	69	48.128	ENSHCOG00000017907	vars2	94	50.710	Hippocampus_comes
ENSCLAG00000002889	VARS2	90	54.995	ENSIPUG00000015573	Vars2	93	54.043	Ictalurus_punctatus
ENSCLAG00000002889	VARS2	99	84.717	ENSSTOG00000009924	VARS2	99	84.717	Ictidomys_tridecemlineatus
ENSCLAG00000002889	VARS2	99	81.947	ENSJJAG00000011144	Vars2	99	81.947	Jaculus_jaculus
ENSCLAG00000002889	VARS2	93	51.942	ENSKMAG00000001393	vars2	99	51.109	Kryptolebias_marmoratus
ENSCLAG00000002889	VARS2	94	51.758	ENSLBEG00000011949	vars2	94	51.758	Labrus_bergylta
ENSCLAG00000002889	VARS2	52	62.795	ENSLBEG00000005480	-	81	62.795	Labrus_bergylta
ENSCLAG00000002889	VARS2	95	51.553	ENSLACG00000001576	-	99	51.553	Latimeria_chalumnae
ENSCLAG00000002889	VARS2	99	82.971	ENSLAFG00000015183	VARS2	99	82.971	Loxodonta_africana
ENSCLAG00000002889	VARS2	99	84.072	ENSMFAG00000042367	VARS2	99	84.072	Macaca_fascicularis
ENSCLAG00000002889	VARS2	99	84.072	ENSMMUG00000018609	VARS2	99	84.072	Macaca_mulatta
ENSCLAG00000002889	VARS2	99	84.166	ENSMNEG00000043163	VARS2	99	84.166	Macaca_nemestrina
ENSCLAG00000002889	VARS2	99	84.826	ENSMLEG00000041728	VARS2	97	84.826	Mandrillus_leucophaeus
ENSCLAG00000002889	VARS2	96	50.096	ENSMAMG00000020339	vars2	97	49.811	Mastacembelus_armatus
ENSCLAG00000002889	VARS2	99	51.163	ENSMZEG00005017669	vars2	98	51.163	Maylandia_zebra
ENSCLAG00000002889	VARS2	99	82.264	ENSMAUG00000018946	Vars2	99	82.264	Mesocricetus_auratus
ENSCLAG00000002889	VARS2	84	86.338	ENSMICG00000005365	VARS2	100	86.338	Microcebus_murinus
ENSCLAG00000002889	VARS2	94	83.473	ENSMOCG00000014607	Vars2	99	83.473	Microtus_ochrogaster
ENSCLAG00000002889	VARS2	91	52.733	ENSMMOG00000012122	vars2	97	51.147	Mola_mola
ENSCLAG00000002889	VARS2	99	72.505	ENSMODG00000015848	VARS2	99	72.505	Monodelphis_domestica
ENSCLAG00000002889	VARS2	90	52.616	ENSMALG00000009217	vars2	95	54.088	Monopterus_albus
ENSCLAG00000002889	VARS2	99	81.356	MGP_CAROLIEiJ_G0021529	Vars2	99	81.356	Mus_caroli
ENSCLAG00000002889	VARS2	99	81.262	ENSMUSG00000038838	Vars2	99	81.262	Mus_musculus
ENSCLAG00000002889	VARS2	99	81.921	MGP_PahariEiJ_G0020523	Vars2	99	81.921	Mus_pahari
ENSCLAG00000002889	VARS2	99	81.168	MGP_SPRETEiJ_G0022436	Vars2	99	81.168	Mus_spretus
ENSCLAG00000002889	VARS2	99	82.392	ENSMPUG00000011643	VARS2	99	82.392	Mustela_putorius_furo
ENSCLAG00000002889	VARS2	99	81.996	ENSMLUG00000002356	VARS2	97	81.996	Myotis_lucifugus
ENSCLAG00000002889	VARS2	98	75.839	ENSNGAG00000020607	Vars2	99	75.235	Nannospalax_galili
ENSCLAG00000002889	VARS2	64	50.000	ENSNBRG00000001624	vars2	60	51.934	Neolamprologus_brichardi
ENSCLAG00000002889	VARS2	99	81.733	ENSNLEG00000005625	VARS2	97	81.733	Nomascus_leucogenys
ENSCLAG00000002889	VARS2	78	72.379	ENSMEUG00000014475	VARS2	90	72.379	Notamacropus_eugenii
ENSCLAG00000002889	VARS2	90	82.819	ENSOPRG00000000682	VARS2	90	82.819	Ochotona_princeps
ENSCLAG00000002889	VARS2	99	88.701	ENSODEG00000017965	VARS2	99	88.701	Octodon_degus
ENSCLAG00000002889	VARS2	93	38.207	ENSONIG00000004734	vars2	71	59.902	Oreochromis_niloticus
ENSCLAG00000002889	VARS2	75	90.909	ENSOANG00000000398	-	98	90.909	Ornithorhynchus_anatinus
ENSCLAG00000002889	VARS2	99	79.128	ENSOCUG00000021496	VARS2	64	79.128	Oryctolagus_cuniculus
ENSCLAG00000002889	VARS2	93	52.311	ENSORLG00000010632	vars2	95	51.275	Oryzias_latipes
ENSCLAG00000002889	VARS2	94	51.798	ENSORLG00020018584	vars2	96	51.287	Oryzias_latipes_hni
ENSCLAG00000002889	VARS2	94	51.895	ENSORLG00015010408	vars2	96	51.233	Oryzias_latipes_hsok
ENSCLAG00000002889	VARS2	94	52.187	ENSOMEG00000008360	vars2	97	51.549	Oryzias_melastigma
ENSCLAG00000002889	VARS2	99	82.973	ENSOGAG00000006087	VARS2	97	82.973	Otolemur_garnettii
ENSCLAG00000002889	VARS2	99	84.091	ENSOARG00000010844	VARS2	98	84.087	Ovis_aries
ENSCLAG00000002889	VARS2	99	84.449	ENSPPAG00000041141	VARS2	99	84.449	Pan_paniscus
ENSCLAG00000002889	VARS2	99	82.203	ENSPPRG00000006751	VARS2	97	82.203	Panthera_pardus
ENSCLAG00000002889	VARS2	99	82.203	ENSPTIG00000017799	VARS2	98	83.518	Panthera_tigris_altaica
ENSCLAG00000002889	VARS2	99	84.449	ENSPTRG00000034497	VARS2	99	84.449	Pan_troglodytes
ENSCLAG00000002889	VARS2	99	84.731	ENSPANG00000018481	VARS2	100	84.816	Papio_anubis
ENSCLAG00000002889	VARS2	95	54.990	ENSPKIG00000011372	vars2	99	53.882	Paramormyrops_kingsleyae
ENSCLAG00000002889	VARS2	59	67.195	ENSPSIG00000006206	VARS2	92	66.512	Pelodiscus_sinensis
ENSCLAG00000002889	VARS2	96	52.273	ENSPMGG00000000465	vars2	98	52.273	Periophthalmus_magnuspinnatus
ENSCLAG00000002889	VARS2	99	81.114	ENSPEMG00000014691	Vars2	99	81.114	Peromyscus_maniculatus_bairdii
ENSCLAG00000002889	VARS2	99	74.410	ENSPCIG00000015040	VARS2	99	74.410	Phascolarctos_cinereus
ENSCLAG00000002889	VARS2	92	52.490	ENSPFOG00000017616	vars2	97	50.375	Poecilia_formosa
ENSCLAG00000002889	VARS2	92	52.036	ENSPLAG00000019778	vars2	98	50.141	Poecilia_latipinna
ENSCLAG00000002889	VARS2	92	52.135	ENSPMEG00000011123	vars2	97	50.234	Poecilia_mexicana
ENSCLAG00000002889	VARS2	88	48.441	ENSPREG00000014998	vars2	95	46.680	Poecilia_reticulata
ENSCLAG00000002889	VARS2	99	84.920	ENSPPYG00000016424	VARS2	99	84.920	Pongo_abelii
ENSCLAG00000002889	VARS2	84	76.795	ENSPCAG00000006946	VARS2	84	76.795	Procavia_capensis
ENSCLAG00000002889	VARS2	99	83.741	ENSPCOG00000014839	VARS2	97	83.741	Propithecus_coquereli
ENSCLAG00000002889	VARS2	99	82.486	ENSPVAG00000004197	VARS2	99	82.486	Pteropus_vampyrus
ENSCLAG00000002889	VARS2	82	60.484	ENSPNYG00000010314	vars2	97	60.484	Pundamilia_nyererei
ENSCLAG00000002889	VARS2	93	54.410	ENSPNAG00000026793	vars2	94	53.705	Pygocentrus_nattereri
ENSCLAG00000002889	VARS2	99	80.697	ENSRNOG00000000833	Vars2	99	80.697	Rattus_norvegicus
ENSCLAG00000002889	VARS2	99	84.731	ENSRBIG00000032725	VARS2	99	84.731	Rhinopithecus_bieti
ENSCLAG00000002889	VARS2	99	84.920	ENSRROG00000043847	VARS2	99	84.920	Rhinopithecus_roxellana
ENSCLAG00000002889	VARS2	99	82.271	ENSSBOG00000033240	VARS2	97	82.548	Saimiri_boliviensis_boliviensis
ENSCLAG00000002889	VARS2	99	72.899	ENSSHAG00000009307	VARS2	100	72.899	Sarcophilus_harrisii
ENSCLAG00000002889	VARS2	96	52.286	ENSSFOG00015016187	vars2	98	51.828	Scleropages_formosus
ENSCLAG00000002889	VARS2	93	53.610	ENSSMAG00000020842	vars2	98	52.846	Scophthalmus_maximus
ENSCLAG00000002889	VARS2	93	52.688	ENSSDUG00000011598	vars2	98	52.015	Seriola_dumerili
ENSCLAG00000002889	VARS2	91	52.971	ENSSLDG00000015492	vars2	97	51.434	Seriola_lalandi_dorsalis
ENSCLAG00000002889	VARS2	57	87.591	ENSSARG00000003786	-	69	87.591	Sorex_araneus
ENSCLAG00000002889	VARS2	88	58.431	ENSSPUG00000014700	VARS2	94	58.431	Sphenodon_punctatus
ENSCLAG00000002889	VARS2	88	51.468	ENSSPAG00000004654	vars2	94	49.754	Stegastes_partitus
ENSCLAG00000002889	VARS2	99	84.463	ENSSSCG00000001384	VARS2	99	85.066	Sus_scrofa
ENSCLAG00000002889	VARS2	94	52.673	ENSTRUG00000005264	vars2	99	51.311	Takifugu_rubripes
ENSCLAG00000002889	VARS2	96	51.448	ENSTNIG00000005916	vars2	99	51.306	Tetraodon_nigroviridis
ENSCLAG00000002889	VARS2	52	89.552	ENSTBEG00000007976	-	52	89.552	Tupaia_belangeri
ENSCLAG00000002889	VARS2	99	72.290	ENSTTRG00000012243	VARS2	99	72.290	Tursiops_truncatus
ENSCLAG00000002889	VARS2	99	83.067	ENSUAMG00000026124	VARS2	99	84.908	Ursus_americanus
ENSCLAG00000002889	VARS2	99	83.898	ENSUMAG00000019894	VARS2	99	83.898	Ursus_maritimus
ENSCLAG00000002889	VARS2	99	81.955	ENSVVUG00000010754	VARS2	95	81.955	Vulpes_vulpes
ENSCLAG00000002889	VARS2	89	54.517	ENSXETG00000003036	vars2	99	54.927	Xenopus_tropicalis
ENSCLAG00000002889	VARS2	88	54.526	ENSXCOG00000003455	vars2	95	52.277	Xiphophorus_couchianus
ENSCLAG00000002889	VARS2	92	52.428	ENSXMAG00000013523	vars2	97	50.421	Xiphophorus_maculatus