EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000002924 (Gene tree)
Gene ID: 102027464
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 9225 bases
Position: chrJH722013.1:2367480-2376704
Accession: 102027464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004096	tRNA_int_end_N2	PF12928.7	9.7e-19	1	1
ENSCLAP00000004095	tRNA_int_end_N2	PF12928.7	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004176	TSEN54-201	2812	XM_005412297	ENSCLAP00000004095	527 (aa)	XP_005412354	-
ENSCLAT00000004177	TSEN54-202	1467	XM_013508628	ENSCLAP00000004096	488 (aa)	XP_013364082	-

Gene Model

Click here to download ENSCLAG00000002924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000002924's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000002924	TSEN54	99	84.000	ENSG00000182173	TSEN54	99	92.857	Homo_sapiens
ENSCLAG00000002924	TSEN54	96	46.332	ENSAPOG00000009659	tsen54	99	43.981	Acanthochromis_polyacanthus
ENSCLAG00000002924	TSEN54	99	78.679	ENSAMEG00000009414	TSEN54	97	80.464	Ailuropoda_melanoleuca
ENSCLAG00000002924	TSEN54	96	46.422	ENSAOCG00000000152	tsen54	95	46.422	Amphiprion_ocellaris
ENSCLAG00000002924	TSEN54	96	46.035	ENSAPEG00000018931	tsen54	94	46.035	Amphiprion_percula
ENSCLAG00000002924	TSEN54	96	43.870	ENSATEG00000019860	tsen54	97	43.870	Anabas_testudineus
ENSCLAG00000002924	TSEN54	86	50.107	ENSAPLG00000009419	TSEN54	100	50.107	Anas_platyrhynchos
ENSCLAG00000002924	TSEN54	99	52.425	ENSACAG00000006714	TSEN54	98	53.578	Anolis_carolinensis
ENSCLAG00000002924	TSEN54	98	85.164	ENSANAG00000024061	TSEN54	97	85.352	Aotus_nancymaae
ENSCLAG00000002924	TSEN54	96	45.315	ENSACLG00000019800	tsen54	96	45.315	Astatotilapia_calliptera
ENSCLAG00000002924	TSEN54	96	47.070	ENSAMXG00000006546	tsen54	96	47.070	Astyanax_mexicanus
ENSCLAG00000002924	TSEN54	99	79.584	ENSBTAG00000000824	TSEN54	97	80.658	Bos_taurus
ENSCLAG00000002924	TSEN54	98	83.815	ENSCJAG00000014278	TSEN54	97	83.984	Callithrix_jacchus
ENSCLAG00000002924	TSEN54	99	82.453	ENSCAFG00000004798	TSEN54	97	82.785	Canis_familiaris
ENSCLAG00000002924	TSEN54	99	82.453	ENSCAFG00020000312	TSEN54	97	82.785	Canis_lupus_dingo
ENSCLAG00000002924	TSEN54	99	80.534	ENSCHIG00000019908	TSEN54	97	80.822	Capra_hircus
ENSCLAG00000002924	TSEN54	86	79.341	ENSTSYG00000037439	TSEN54	100	79.780	Carlito_syrichta
ENSCLAG00000002924	TSEN54	98	84.008	ENSCCAG00000036624	TSEN54	97	83.984	Cebus_capucinus
ENSCLAG00000002924	TSEN54	97	84.570	ENSCATG00000042877	TSEN54	97	84.570	Cercocebus_atys
ENSCLAG00000002924	TSEN54	99	84.190	ENSCSAG00000004809	TSEN54	97	84.375	Chlorocebus_sabaeus
ENSCLAG00000002924	TSEN54	99	55.243	ENSCPBG00000028071	TSEN54	98	55.470	Chrysemys_picta_bellii
ENSCLAG00000002924	TSEN54	99	83.810	ENSCANG00000028053	TSEN54	97	83.789	Colobus_angolensis_palliatus
ENSCLAG00000002924	TSEN54	99	81.856	ENSCGRG00001020029	Tsen54	97	81.992	Cricetulus_griseus_chok1gshd
ENSCLAG00000002924	TSEN54	84	80.090	ENSCGRG00000016289	Tsen54	100	80.149	Cricetulus_griseus_crigri
ENSCLAG00000002924	TSEN54	80	39.437	ENSCSEG00000020586	tsen54	99	39.437	Cynoglossus_semilaevis
ENSCLAG00000002924	TSEN54	80	44.313	ENSDARG00000036844	tsen54	99	45.024	Danio_rerio
ENSCLAG00000002924	TSEN54	99	77.736	ENSDNOG00000018452	TSEN54	97	78.530	Dasypus_novemcinctus
ENSCLAG00000002924	TSEN54	99	83.505	ENSDORG00000004073	Tsen54	97	83.898	Dipodomys_ordii
ENSCLAG00000002924	TSEN54	96	36.158	ENSEBUG00000005203	TSEN54	95	36.158	Eptatretus_burgeri
ENSCLAG00000002924	TSEN54	99	83.176	ENSEASG00005000579	TSEN54	97	83.333	Equus_asinus_asinus
ENSCLAG00000002924	TSEN54	99	83.743	ENSECAG00000004924	TSEN54	97	83.915	Equus_caballus
ENSCLAG00000002924	TSEN54	86	76.805	ENSEEUG00000008467	TSEN54	100	77.024	Erinaceus_europaeus
ENSCLAG00000002924	TSEN54	96	45.455	ENSELUG00000017703	tsen54	90	45.455	Esox_lucius
ENSCLAG00000002924	TSEN54	99	82.197	ENSFCAG00000023712	TSEN54	98	82.592	Felis_catus
ENSCLAG00000002924	TSEN54	93	52.174	ENSFALG00000001119	TSEN54	95	51.650	Ficedula_albicollis
ENSCLAG00000002924	TSEN54	86	87.583	ENSFDAG00000019090	TSEN54	99	87.583	Fukomys_damarensis
ENSCLAG00000002924	TSEN54	96	47.184	ENSFHEG00000005470	tsen54	96	47.379	Fundulus_heteroclitus
ENSCLAG00000002924	TSEN54	85	42.000	ENSGMOG00000013146	tsen54	99	42.000	Gadus_morhua
ENSCLAG00000002924	TSEN54	94	48.549	ENSGALG00000047163	TSEN54	98	48.549	Gallus_gallus
ENSCLAG00000002924	TSEN54	96	47.093	ENSGAFG00000005111	tsen54	96	47.674	Gambusia_affinis
ENSCLAG00000002924	TSEN54	96	44.423	ENSGACG00000014987	tsen54	99	44.423	Gasterosteus_aculeatus
ENSCLAG00000002924	TSEN54	100	55.249	ENSGAGG00000006825	TSEN54	97	55.894	Gopherus_agassizii
ENSCLAG00000002924	TSEN54	96	83.661	ENSGGOG00000009417	TSEN54	100	83.858	Gorilla_gorilla
ENSCLAG00000002924	TSEN54	87	44.093	ENSHBUG00000018296	tsen54	99	37.900	Haplochromis_burtoni
ENSCLAG00000002924	TSEN54	99	89.504	ENSHGLG00000007979	TSEN54	97	89.237	Heterocephalus_glaber_female
ENSCLAG00000002924	TSEN54	99	88.550	ENSHGLG00100005497	TSEN54	97	88.258	Heterocephalus_glaber_male
ENSCLAG00000002924	TSEN54	80	42.019	ENSHCOG00000007481	tsen54	99	42.019	Hippocampus_comes
ENSCLAG00000002924	TSEN54	99	41.333	ENSIPUG00000000590	tsen54	96	41.797	Ictalurus_punctatus
ENSCLAG00000002924	TSEN54	99	81.107	ENSSTOG00000012883	TSEN54	97	81.409	Ictidomys_tridecemlineatus
ENSCLAG00000002924	TSEN54	99	82.546	ENSJJAG00000007365	Tsen54	97	82.700	Jaculus_jaculus
ENSCLAG00000002924	TSEN54	96	47.338	ENSKMAG00000006944	tsen54	97	47.048	Kryptolebias_marmoratus
ENSCLAG00000002924	TSEN54	96	43.580	ENSLBEG00000004199	tsen54	97	43.969	Labrus_bergylta
ENSCLAG00000002924	TSEN54	96	49.425	ENSLACG00000009497	TSEN54	100	49.425	Latimeria_chalumnae
ENSCLAG00000002924	TSEN54	97	46.617	ENSLOCG00000011191	tsen54	97	46.816	Lepisosteus_oculatus
ENSCLAG00000002924	TSEN54	99	75.660	ENSLAFG00000011655	TSEN54	97	76.209	Loxodonta_africana
ENSCLAG00000002924	TSEN54	99	84.381	ENSMFAG00000000712	TSEN54	97	84.570	Macaca_fascicularis
ENSCLAG00000002924	TSEN54	99	84.190	ENSMNEG00000029199	TSEN54	97	84.375	Macaca_nemestrina
ENSCLAG00000002924	TSEN54	86	83.186	ENSMLEG00000044168	TSEN54	88	83.407	Mandrillus_leucophaeus
ENSCLAG00000002924	TSEN54	96	44.168	ENSMAMG00000019773	tsen54	97	44.023	Mastacembelus_armatus
ENSCLAG00000002924	TSEN54	96	45.315	ENSMZEG00005000884	tsen54	96	45.315	Maylandia_zebra
ENSCLAG00000002924	TSEN54	99	48.211	ENSMGAG00000009556	TSEN54	97	48.743	Meleagris_gallopavo
ENSCLAG00000002924	TSEN54	99	81.489	ENSMAUG00000016838	Tsen54	97	81.800	Mesocricetus_auratus
ENSCLAG00000002924	TSEN54	99	81.143	ENSMICG00000044012	TSEN54	97	81.836	Microcebus_murinus
ENSCLAG00000002924	TSEN54	99	82.443	ENSMOCG00000021585	Tsen54	97	82.779	Microtus_ochrogaster
ENSCLAG00000002924	TSEN54	95	43.701	ENSMMOG00000020189	tsen54	98	43.898	Mola_mola
ENSCLAG00000002924	TSEN54	98	66.604	ENSMODG00000007438	TSEN54	96	66.667	Monodelphis_domestica
ENSCLAG00000002924	TSEN54	96	46.023	ENSMALG00000020573	tsen54	97	46.212	Monopterus_albus
ENSCLAG00000002924	TSEN54	99	80.725	MGP_CAROLIEiJ_G0017417	Tsen54	97	80.822	Mus_caroli
ENSCLAG00000002924	TSEN54	99	80.725	ENSMUSG00000020781	Tsen54	97	80.822	Mus_musculus
ENSCLAG00000002924	TSEN54	99	81.107	MGP_PahariEiJ_G0018547	Tsen54	97	81.213	Mus_pahari
ENSCLAG00000002924	TSEN54	99	80.725	MGP_SPRETEiJ_G0018262	Tsen54	97	80.822	Mus_spretus
ENSCLAG00000002924	TSEN54	99	80.566	ENSMPUG00000013870	TSEN54	97	80.851	Mustela_putorius_furo
ENSCLAG00000002924	TSEN54	99	77.170	ENSMLUG00000015298	TSEN54	97	77.950	Myotis_lucifugus
ENSCLAG00000002924	TSEN54	99	80.619	ENSNGAG00000015673	Tsen54	97	80.720	Nannospalax_galili
ENSCLAG00000002924	TSEN54	88	64.882	ENSMEUG00000011908	TSEN54	100	64.882	Notamacropus_eugenii
ENSCLAG00000002924	TSEN54	100	75.379	ENSOPRG00000012513	TSEN54	97	75.781	Ochotona_princeps
ENSCLAG00000002924	TSEN54	96	45.962	ENSONIG00000009543	tsen54	96	45.962	Oreochromis_niloticus
ENSCLAG00000002924	TSEN54	99	73.408	ENSOCUG00000009875	TSEN54	97	74.231	Oryctolagus_cuniculus
ENSCLAG00000002924	TSEN54	96	44.401	ENSORLG00000000852	tsen54	97	44.401	Oryzias_latipes
ENSCLAG00000002924	TSEN54	96	44.970	ENSORLG00020018221	tsen54	97	45.117	Oryzias_latipes_hni
ENSCLAG00000002924	TSEN54	96	44.970	ENSORLG00015009413	tsen54	98	45.117	Oryzias_latipes_hsok
ENSCLAG00000002924	TSEN54	96	45.079	ENSOMEG00000014402	tsen54	94	45.224	Oryzias_melastigma
ENSCLAG00000002924	TSEN54	99	77.905	ENSOGAG00000001442	TSEN54	97	78.516	Otolemur_garnettii
ENSCLAG00000002924	TSEN54	86	76.535	ENSOARG00000010361	TSEN54	100	77.462	Ovis_aries
ENSCLAG00000002924	TSEN54	94	83.065	ENSPPAG00000043519	TSEN54	100	83.065	Pan_paniscus
ENSCLAG00000002924	TSEN54	99	82.197	ENSPPRG00000009162	TSEN54	98	82.592	Panthera_pardus
ENSCLAG00000002924	TSEN54	86	80.973	ENSPTIG00000019312	TSEN54	96	81.416	Panthera_tigris_altaica
ENSCLAG00000002924	TSEN54	99	83.810	ENSPTRG00000009646	TSEN54	97	83.789	Pan_troglodytes
ENSCLAG00000002924	TSEN54	100	84.280	ENSPANG00000020133	TSEN54	97	84.570	Papio_anubis
ENSCLAG00000002924	TSEN54	97	47.145	ENSPKIG00000023018	tsen54	100	47.564	Paramormyrops_kingsleyae
ENSCLAG00000002924	TSEN54	80	52.083	ENSPSIG00000012807	TSEN54	99	52.083	Pelodiscus_sinensis
ENSCLAG00000002924	TSEN54	92	35.772	ENSPMGG00000019578	tsen54	99	35.772	Periophthalmus_magnuspinnatus
ENSCLAG00000002924	TSEN54	99	83.505	ENSPEMG00000014857	Tsen54	97	83.686	Peromyscus_maniculatus_bairdii
ENSCLAG00000002924	TSEN54	96	48.276	ENSPFOG00000022740	tsen54	96	48.851	Poecilia_formosa
ENSCLAG00000002924	TSEN54	96	48.170	ENSPLAG00000014847	tsen54	96	48.748	Poecilia_latipinna
ENSCLAG00000002924	TSEN54	96	47.977	ENSPMEG00000022876	tsen54	96	48.555	Poecilia_mexicana
ENSCLAG00000002924	TSEN54	98	46.958	ENSPREG00000013090	tsen54	96	48.062	Poecilia_reticulata
ENSCLAG00000002924	TSEN54	91	76.987	ENSPPYG00000008629	TSEN54	100	77.406	Pongo_abelii
ENSCLAG00000002924	TSEN54	95	68.102	ENSPCAG00000002093	TSEN54	97	68.876	Procavia_capensis
ENSCLAG00000002924	TSEN54	99	83.556	ENSPCOG00000027880	TSEN54	98	84.570	Propithecus_coquereli
ENSCLAG00000002924	TSEN54	99	81.698	ENSPVAG00000008446	TSEN54	97	82.205	Pteropus_vampyrus
ENSCLAG00000002924	TSEN54	92	45.149	ENSPNYG00000010217	tsen54	99	45.238	Pundamilia_nyererei
ENSCLAG00000002924	TSEN54	96	45.681	ENSPNAG00000003770	tsen54	96	45.681	Pygocentrus_nattereri
ENSCLAG00000002924	TSEN54	99	81.107	ENSRNOG00000004598	Tsen54	97	81.213	Rattus_norvegicus
ENSCLAG00000002924	TSEN54	99	84.190	ENSRBIG00000043040	TSEN54	97	84.180	Rhinopithecus_bieti
ENSCLAG00000002924	TSEN54	99	84.000	ENSRROG00000030797	TSEN54	97	84.180	Rhinopithecus_roxellana
ENSCLAG00000002924	TSEN54	100	80.682	ENSSBOG00000013543	TSEN54	96	81.055	Saimiri_boliviensis_boliviensis
ENSCLAG00000002924	TSEN54	99	64.925	ENSSHAG00000018127	TSEN54	96	64.952	Sarcophilus_harrisii
ENSCLAG00000002924	TSEN54	80	44.755	ENSSFOG00015004093	tsen54	100	45.012	Scleropages_formosus
ENSCLAG00000002924	TSEN54	96	42.885	ENSSMAG00000012449	tsen54	97	44.294	Scophthalmus_maximus
ENSCLAG00000002924	TSEN54	96	46.484	ENSSDUG00000021506	tsen54	97	46.484	Seriola_dumerili
ENSCLAG00000002924	TSEN54	96	46.484	ENSSLDG00000016303	tsen54	97	46.484	Seriola_lalandi_dorsalis
ENSCLAG00000002924	TSEN54	86	52.113	ENSSPUG00000008988	TSEN54	97	52.103	Sphenodon_punctatus
ENSCLAG00000002924	TSEN54	92	45.582	ENSSPAG00000008098	-	99	45.582	Stegastes_partitus
ENSCLAG00000002924	TSEN54	80	41.920	ENSSPAG00000008047	tsen54	99	41.920	Stegastes_partitus
ENSCLAG00000002924	TSEN54	99	82.264	ENSSSCG00000036852	TSEN54	97	82.979	Sus_scrofa
ENSCLAG00000002924	TSEN54	86	51.982	ENSTGUG00000008548	TSEN54	100	51.982	Taeniopygia_guttata
ENSCLAG00000002924	TSEN54	96	45.614	ENSTRUG00000004230	tsen54	96	45.809	Takifugu_rubripes
ENSCLAG00000002924	TSEN54	98	43.633	ENSTNIG00000011281	tsen54	97	44.902	Tetraodon_nigroviridis
ENSCLAG00000002924	TSEN54	86	80.568	ENSTTRG00000015828	TSEN54	100	80.786	Tursiops_truncatus
ENSCLAG00000002924	TSEN54	80	77.907	ENSUAMG00000010045	TSEN54	100	77.907	Ursus_americanus
ENSCLAG00000002924	TSEN54	83	77.978	ENSUMAG00000008979	TSEN54	100	78.202	Ursus_maritimus
ENSCLAG00000002924	TSEN54	97	81.942	ENSVVUG00000011411	TSEN54	98	82.136	Vulpes_vulpes
ENSCLAG00000002924	TSEN54	99	48.582	ENSXETG00000012532	tsen54	99	70.833	Xenopus_tropicalis
ENSCLAG00000002924	TSEN54	96	43.615	ENSXCOG00000018245	tsen54	99	44.204	Xiphophorus_couchianus
ENSCLAG00000002924	TSEN54	96	47.399	ENSXMAG00000018818	tsen54	96	47.784	Xiphophorus_maculatus