EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003227 (Gene tree)
Gene ID: 106149372
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 122580 bases
Position: chrJH721904.1:1265279-1387858
Accession: 106149372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004535	MRP-S35	PF10246.9	3.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004620	-	856	XM_013518181	ENSCLAP00000004535	110 (aa)	XP_013373635	-

Gene Model

Click here to download ENSCLAG00000003227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003227	-	95	85.714	ENSG00000147586	MRPS28	93	89.583	Homo_sapiens
ENSCLAG00000003227	-	83	70.330	ENSAPOG00000007350	mrps28	72	75.294	Acanthochromis_polyacanthus
ENSCLAG00000003227	-	95	84.615	ENSAMEG00000017516	MRPS28	82	88.298	Ailuropoda_melanoleuca
ENSCLAG00000003227	-	85	74.468	ENSACIG00000007839	mrps28	53	74.468	Amphilophus_citrinellus
ENSCLAG00000003227	-	91	69.000	ENSAOCG00000000705	mrps28	55	73.404	Amphiprion_ocellaris
ENSCLAG00000003227	-	91	69.000	ENSAPEG00000016051	mrps28	55	73.404	Amphiprion_percula
ENSCLAG00000003227	-	85	74.468	ENSATEG00000015295	mrps28	51	74.468	Anabas_testudineus
ENSCLAG00000003227	-	91	84.000	ENSAPLG00000005666	MRPS28	90	84.375	Anas_platyrhynchos
ENSCLAG00000003227	-	85	69.149	ENSACLG00000003892	mrps28	81	69.149	Astatotilapia_calliptera
ENSCLAG00000003227	-	91	76.000	ENSAMXG00000026324	mrps28	51	77.660	Astyanax_mexicanus
ENSCLAG00000003227	-	96	87.736	ENSBTAG00000001302	MRPS28	50	92.553	Bos_taurus
ENSCLAG00000003227	-	82	50.000	WBGene00012830	mrps-28	52	50.000	Caenorhabditis_elegans
ENSCLAG00000003227	-	88	89.691	ENSCAFG00000008393	MRPS28	53	89.583	Canis_familiaris
ENSCLAG00000003227	-	88	89.691	ENSCAFG00020017987	MRPS28	53	89.583	Canis_lupus_dingo
ENSCLAG00000003227	-	95	87.619	ENSCHIG00000018727	MRPS28	50	91.489	Capra_hircus
ENSCLAG00000003227	-	95	74.286	ENSTSYG00000031343	-	52	77.660	Carlito_syrichta
ENSCLAG00000003227	-	100	83.636	ENSCAPG00000006948	-	100	83.636	Cavia_aperea
ENSCLAG00000003227	-	100	84.545	ENSCPOG00000031885	-	100	84.545	Cavia_porcellus
ENSCLAG00000003227	-	95	83.810	ENSCCAG00000022534	MRPS28	71	86.207	Cebus_capucinus
ENSCLAG00000003227	-	95	84.762	ENSCHOG00000004885	MRPS28	52	89.362	Choloepus_hoffmanni
ENSCLAG00000003227	-	93	86.275	ENSCGRG00001018741	Mrps28	51	90.426	Cricetulus_griseus_chok1gshd
ENSCLAG00000003227	-	93	84.314	ENSCGRG00000018208	Mrps28	83	86.458	Cricetulus_griseus_crigri
ENSCLAG00000003227	-	85	68.085	ENSCSEG00000020947	mrps28	89	68.085	Cynoglossus_semilaevis
ENSCLAG00000003227	-	93	53.922	ENSCVAG00000007159	mrps28	76	61.364	Cyprinodon_variegatus
ENSCLAG00000003227	-	91	73.000	ENSDARG00000041538	mrps28	53	73.404	Danio_rerio
ENSCLAG00000003227	-	95	82.857	ENSDORG00000002762	Mrps28	51	87.234	Dipodomys_ordii
ENSCLAG00000003227	-	84	77.174	ENSEBUG00000010846	mrps28	55	76.344	Eptatretus_burgeri
ENSCLAG00000003227	-	92	87.129	ENSEASG00005020574	MRPS28	50	90.426	Equus_asinus_asinus
ENSCLAG00000003227	-	92	88.119	ENSECAG00000015430	MRPS28	50	90.426	Equus_caballus
ENSCLAG00000003227	-	93	51.961	ENSEEUG00000013471	MRPS28	53	54.255	Erinaceus_europaeus
ENSCLAG00000003227	-	95	86.538	ENSFCAG00000032510	MRPS28	50	91.489	Felis_catus
ENSCLAG00000003227	-	91	83.000	ENSFALG00000008608	MRPS28	73	83.333	Ficedula_albicollis
ENSCLAG00000003227	-	100	85.455	ENSFDAG00000013634	MRPS28	58	85.455	Fukomys_damarensis
ENSCLAG00000003227	-	87	57.292	ENSFHEG00000006233	mrps28	66	66.265	Fundulus_heteroclitus
ENSCLAG00000003227	-	93	69.608	ENSGACG00000019939	mrps28	50	75.532	Gasterosteus_aculeatus
ENSCLAG00000003227	-	91	80.000	ENSGAGG00000025904	MRPS28	55	82.979	Gopherus_agassizii
ENSCLAG00000003227	-	85	69.149	ENSHBUG00000014315	mrps28	80	69.149	Haplochromis_burtoni
ENSCLAG00000003227	-	84	65.591	ENSHCOG00000011561	mrps28	53	65.591	Hippocampus_comes
ENSCLAG00000003227	-	88	72.165	ENSKMAG00000006636	mrps28	50	74.468	Kryptolebias_marmoratus
ENSCLAG00000003227	-	91	75.000	ENSLACG00000014702	MRPS28	51	76.042	Latimeria_chalumnae
ENSCLAG00000003227	-	81	76.404	ENSMAMG00000017782	mrps28	77	76.404	Mastacembelus_armatus
ENSCLAG00000003227	-	85	69.149	ENSMZEG00005014997	mrps28	81	69.149	Maylandia_zebra
ENSCLAG00000003227	-	85	69.149	ENSMZEG00005010529	-	81	69.149	Maylandia_zebra
ENSCLAG00000003227	-	90	84.848	ENSMGAG00000011622	MRPS28	92	85.417	Meleagris_gallopavo
ENSCLAG00000003227	-	93	88.235	ENSMAUG00000009465	Mrps28	51	91.489	Mesocricetus_auratus
ENSCLAG00000003227	-	95	85.714	ENSMICG00000044873	MRPS28	51	90.426	Microcebus_murinus
ENSCLAG00000003227	-	93	86.275	ENSMOCG00000021930	Mrps28	51	91.489	Microtus_ochrogaster
ENSCLAG00000003227	-	91	87.000	ENSMODG00000006621	MRPS28	51	87.500	Monodelphis_domestica
ENSCLAG00000003227	-	85	76.596	ENSMALG00000006494	mrps28	71	76.596	Monopterus_albus
ENSCLAG00000003227	-	95	83.810	MGP_CAROLIEiJ_G0024833	Mrps28	51	89.362	Mus_caroli
ENSCLAG00000003227	-	95	82.857	ENSMUSG00000040269	Mrps28	51	88.298	Mus_musculus
ENSCLAG00000003227	-	95	83.810	MGP_PahariEiJ_G0026281	Mrps28	51	89.362	Mus_pahari
ENSCLAG00000003227	-	95	82.857	MGP_SPRETEiJ_G0025763	Mrps28	51	88.298	Mus_spretus
ENSCLAG00000003227	-	95	86.538	ENSMPUG00000001853	MRPS28	50	90.426	Mustela_putorius_furo
ENSCLAG00000003227	-	92	84.158	ENSMLUG00000015175	MRPS28	50	88.298	Myotis_lucifugus
ENSCLAG00000003227	-	93	87.255	ENSNGAG00000000216	Mrps28	51	90.426	Nannospalax_galili
ENSCLAG00000003227	-	85	69.149	ENSNBRG00000021393	mrps28	54	69.149	Neolamprologus_brichardi
ENSCLAG00000003227	-	92	84.158	ENSMEUG00000007676	MRPS28	53	86.458	Notamacropus_eugenii
ENSCLAG00000003227	-	93	90.196	ENSODEG00000005701	MRPS28	50	93.617	Octodon_degus
ENSCLAG00000003227	-	85	69.149	ENSONIG00000020758	mrps28	54	69.149	Oreochromis_niloticus
ENSCLAG00000003227	-	92	88.119	ENSOCUG00000000867	MRPS28	54	91.489	Oryctolagus_cuniculus
ENSCLAG00000003227	-	91	66.000	ENSORLG00000026843	mrps28	53	69.149	Oryzias_latipes
ENSCLAG00000003227	-	91	67.000	ENSORLG00020022089	mrps28	53	70.213	Oryzias_latipes_hni
ENSCLAG00000003227	-	85	64.894	ENSOMEG00000008250	mrps28	53	64.894	Oryzias_melastigma
ENSCLAG00000003227	-	95	86.667	ENSOGAG00000016599	MRPS28	51	90.426	Otolemur_garnettii
ENSCLAG00000003227	-	95	87.500	ENSPPRG00000009220	MRPS28	50	91.489	Panthera_pardus
ENSCLAG00000003227	-	95	86.538	ENSPTIG00000019934	MRPS28	50	90.426	Panthera_tigris_altaica
ENSCLAG00000003227	-	91	76.000	ENSPKIG00000022304	mrps28	77	76.042	Paramormyrops_kingsleyae
ENSCLAG00000003227	-	89	63.636	ENSPMGG00000008007	-	51	64.516	Periophthalmus_magnuspinnatus
ENSCLAG00000003227	-	93	85.294	ENSPEMG00000012338	Mrps28	51	89.362	Peromyscus_maniculatus_bairdii
ENSCLAG00000003227	-	93	74.510	ENSPMAG00000002015	mrps28	84	78.723	Petromyzon_marinus
ENSCLAG00000003227	-	93	83.333	ENSPCIG00000026795	MRPS28	52	85.417	Phascolarctos_cinereus
ENSCLAG00000003227	-	89	62.245	ENSPFOG00000020828	mrps28	52	64.444	Poecilia_formosa
ENSCLAG00000003227	-	89	62.245	ENSPLAG00000005387	mrps28	52	64.444	Poecilia_latipinna
ENSCLAG00000003227	-	77	67.059	ENSPMEG00000022332	mrps28	52	67.059	Poecilia_mexicana
ENSCLAG00000003227	-	89	62.245	ENSPREG00000005690	mrps28	53	64.444	Poecilia_reticulata
ENSCLAG00000003227	-	95	81.905	ENSPPYG00000018694	MRPS28	52	87.234	Pongo_abelii
ENSCLAG00000003227	-	95	86.667	ENSPCAG00000000404	MRPS28	83	89.583	Procavia_capensis
ENSCLAG00000003227	-	95	87.619	ENSPCOG00000003866	MRPS28	51	92.553	Propithecus_coquereli
ENSCLAG00000003227	-	93	85.294	ENSPVAG00000007815	MRPS28	52	89.362	Pteropus_vampyrus
ENSCLAG00000003227	-	85	69.149	ENSPNYG00000016499	mrps28	81	69.149	Pundamilia_nyererei
ENSCLAG00000003227	-	91	77.000	ENSPNAG00000018621	mrps28	51	78.723	Pygocentrus_nattereri
ENSCLAG00000003227	-	93	87.255	ENSRNOG00000032630	Mrps28	50	90.426	Rattus_norvegicus
ENSCLAG00000003227	-	95	81.905	ENSSBOG00000028198	MRPS28	73	83.333	Saimiri_boliviensis_boliviensis
ENSCLAG00000003227	-	85	71.277	ENSSMAG00000021042	mrps28	55	71.277	Scophthalmus_maximus
ENSCLAG00000003227	-	86	71.579	ENSSDUG00000021722	mrps28	53	71.579	Seriola_dumerili
ENSCLAG00000003227	-	82	73.333	ENSSLDG00000013261	mrps28	50	72.826	Seriola_lalandi_dorsalis
ENSCLAG00000003227	-	95	83.810	ENSSARG00000007429	MRPS28	51	88.421	Sorex_araneus
ENSCLAG00000003227	-	91	76.000	ENSSPUG00000017502	MRPS28	57	77.083	Sphenodon_punctatus
ENSCLAG00000003227	-	91	66.000	ENSSPAG00000003194	mrps28	54	70.213	Stegastes_partitus
ENSCLAG00000003227	-	95	86.667	ENSSSCG00000037782	MRPS28	50	90.426	Sus_scrofa
ENSCLAG00000003227	-	95	81.731	ENSTBEG00000010380	MRPS28	52	86.022	Tupaia_belangeri
ENSCLAG00000003227	-	95	86.667	ENSTTRG00000000087	MRPS28	52	90.426	Tursiops_truncatus
ENSCLAG00000003227	-	95	87.500	ENSUAMG00000018127	MRPS28	50	91.489	Ursus_americanus
ENSCLAG00000003227	-	95	87.500	ENSUMAG00000014927	MRPS28	50	91.489	Ursus_maritimus
ENSCLAG00000003227	-	95	88.571	ENSVPAG00000000652	MRPS28	52	92.553	Vicugna_pacos
ENSCLAG00000003227	-	88	89.691	ENSVVUG00000000384	MRPS28	54	89.583	Vulpes_vulpes